Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0752
(308 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_02_0112 + 5385660-5385821,5386337-5386876 27 2.3
08_01_0123 + 974941-975186,975274-977505 27 2.3
12_01_0013 - 99290-99299,99593-99703,100085-100587,100925-100995... 27 3.0
11_01_0013 - 103484-103493,103787-103897,104279-104781,105119-10... 27 3.0
01_01_1152 + 9170628-9171899 27 3.0
11_01_0676 - 5511755-5511831,5512857-5513052,5513462-5513577,551... 27 4.0
08_02_0902 - 22408895-22409620,22410190-22410326,22410550-224106... 27 4.0
02_05_0592 - 30210219-30210757,30210898-30210919 27 4.0
03_05_1133 - 30614901-30615389,30615823-30615933,30616113-306161... 26 5.2
11_06_0092 + 19973364-19975983,19976272-19976648 26 6.9
08_01_1063 + 10839860-10840099,10840185-10840895 26 6.9
04_04_0276 + 24091360-24091464,24091580-24091713,24091813-240924... 26 6.9
04_03_0182 - 12349072-12349149,12349459-12349656,12349746-123497... 26 6.9
03_06_0043 - 31251772-31251965,31252071-31252158 26 6.9
03_05_0730 + 27208293-27208813,27209052-27209173,27210429-272104... 26 6.9
01_06_0373 - 28841462-28842850 26 6.9
07_01_0613 - 4535892-4536331,4536462-4536543,4537493-4537576,453... 25 9.2
06_03_0611 - 22721977-22722276,22722765-22722853,22722978-227230... 25 9.2
02_02_0421 - 10042184-10042197,10042442-10042822,10044158-100442... 25 9.2
01_06_1406 - 37073548-37073822,37073892-37074111,37074200-370742... 25 9.2
>10_02_0112 + 5385660-5385821,5386337-5386876
Length = 233
Score = 27.5 bits (58), Expect = 2.3
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +2
Query: 44 ICLFTIAIAAMAAVTNLSNVLKNGNDNF--TARMFTEVVKNNPGKSVVLSAFSVLPPLAQ 217
+CL T+ + + ++ +S++LK G +NF ++ + VV+ P K + +F L +
Sbjct: 43 MCLSTLRYLSSSLLSRVSHLLKVGRNNFRPPPKVDSSVVRIEPRKPLPPVSFKEWDGLVR 102
Query: 218 LALASDGETHEELLK 262
L +T + K
Sbjct: 103 LCFNRKNKTLGAIFK 117
>08_01_0123 + 974941-975186,975274-977505
Length = 825
Score = 27.5 bits (58), Expect = 2.3
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +2
Query: 143 TEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDD 283
T ++ +P +L L +A A A+DG H L +G PDD
Sbjct: 617 TNILNYSPCSVAILVDRGSLSTVAAAAAAADGFPHRVALYFLGGPDD 663
>12_01_0013 -
99290-99299,99593-99703,100085-100587,100925-100995,
101413-101491,102336-102956
Length = 464
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -2
Query: 142 KHSGCEVIVSIFEHIREICDGCHCRDG--DSKQTNDC 38
K GC+ + + + GCHC DG + + +DC
Sbjct: 386 KLEGCDQAIGSDAVVEALRGGCHCLDGFRNGNEISDC 422
>11_01_0013 -
103484-103493,103787-103897,104279-104781,105119-105189,
105607-105685,106530-107153
Length = 465
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -2
Query: 142 KHSGCEVIVSIFEHIREICDGCHCRDG--DSKQTNDC 38
K GC+ + + + GCHC DG + + +DC
Sbjct: 387 KLEGCDQAIGSDAVVEALRGGCHCLDGFRNGNEISDC 423
>01_01_1152 + 9170628-9171899
Length = 423
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 167 GKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFP 277
G++ ++S S LA +A + GET ELL +G P
Sbjct: 58 GRNFIVSPLSFHAALALVADGARGETQRELLGFLGSP 94
>11_01_0676 - 5511755-5511831,5512857-5513052,5513462-5513577,
5513752-5514597,5515515-5515766,5522344-5525206
Length = 1449
Score = 26.6 bits (56), Expect = 4.0
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 94 EICDGCHCR 68
E CDGCHCR
Sbjct: 1322 EYCDGCHCR 1330
>08_02_0902 -
22408895-22409620,22410190-22410326,22410550-22410685,
22410787-22411224
Length = 478
Score = 26.6 bits (56), Expect = 4.0
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = +1
Query: 22 GHKHEDNHLFVYYRHRGNGS--RH--KSL*CAQKWKR 120
G+ +ED H + Y + NGS +H KSL A W R
Sbjct: 165 GYCYEDEHRMLVYEYMSNGSLEKHLFKSLDGAMPWMR 201
>02_05_0592 - 30210219-30210757,30210898-30210919
Length = 186
Score = 26.6 bits (56), Expect = 4.0
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +2
Query: 164 PGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDA 289
P ++V VLP A++ A+ G TH+ ++ +GF D+A
Sbjct: 35 PMANLVRLIKKVLPGKAKIGGAAKGLTHDCAVEFVGFVGDEA 76
>03_05_1133 -
30614901-30615389,30615823-30615933,30616113-30616178,
30616347-30616406,30616493-30616801,30616960-30617108,
30617200-30617269,30617370-30617494,30617516-30617573,
30618176-30618370,30618585-30618857,30618950-30619120,
30619203-30619333,30619423-30619582,30619712-30619900,
30620023-30620118,30620381-30620611,30620715-30620853,
30620903-30621057,30621160-30621378
Length = 1131
Score = 26.2 bits (55), Expect = 5.2
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Frame = -3
Query: 249 SWVSPSEAKAN*ARGGSTENAERTTLFPGLF-----FTTSVNILAVKLSFPFLSTLERFV 85
SW+S + A+ R G + E L+P + T +N L +++ + ++ F+
Sbjct: 644 SWISKASARQRRGRAGRVQPGECYHLYPRYYQLPELLRTPLNSLCLQIKSLQVGSIGEFL 703
Query: 84 TAAI---AAMAIVN 52
+AA+ A +A+ N
Sbjct: 704 SAALQPPAPLAVQN 717
>11_06_0092 + 19973364-19975983,19976272-19976648
Length = 998
Score = 25.8 bits (54), Expect = 6.9
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +2
Query: 80 AVTNLSNVLKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELL 259
A NLS + + N ++ EV+ N ++ +AFS LP L ++ + + + H +
Sbjct: 206 AFNNLSGAIPDPIWNISSLTIFEVISNKLSGTLPTNAFSNLPSLQEVYMYYN-QFHGRIP 264
Query: 260 KAIG 271
+IG
Sbjct: 265 ASIG 268
>08_01_1063 + 10839860-10840099,10840185-10840895
Length = 316
Score = 25.8 bits (54), Expect = 6.9
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -1
Query: 284 RRQGSR*LSKALHGFHHQKLKLTEREEAAPKMPRGQRFSLDYFSLLR 144
+R+G R +++ GFH L + E APK R +FSL ++R
Sbjct: 120 KRKGERSVNRKDEGFHVVTLVSPKGEPLAPKTARA-KFSLQCGIIVR 165
>04_04_0276 +
24091360-24091464,24091580-24091713,24091813-24092454,
24092858-24093044
Length = 355
Score = 25.8 bits (54), Expect = 6.9
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 85 DGCHCRDGDSKQTNDCLHVCGLRL 14
DGC C D D+ D GLRL
Sbjct: 216 DGCSCADADADADTDAPPCRGLRL 239
>04_03_0182 -
12349072-12349149,12349459-12349656,12349746-12349750,
12349928-12350041,12350129-12350240,12350363-12350377
Length = 173
Score = 25.8 bits (54), Expect = 6.9
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +3
Query: 69 RQWQPSQISLMCSKMETITSQPECLPK**KIIQGKAL 179
+Q P + +++CSK E ++PE P ++ GK +
Sbjct: 112 KQKSPEEAAILCSKWEAEITKPEWHPFMIVMVDGKEM 148
>03_06_0043 - 31251772-31251965,31252071-31252158
Length = 93
Score = 25.8 bits (54), Expect = 6.9
Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -2
Query: 94 EICDG-CHCRDGDSKQTNDCLHVCGL 20
+ CDG C R + + +DCL CG+
Sbjct: 30 DFCDGKCKVRCSKASRHDDCLKYCGV 55
>03_05_0730 +
27208293-27208813,27209052-27209173,27210429-27210477,
27210689-27210938,27211474-27211619,27211699-27211846,
27212544-27212612,27212641-27212784
Length = 482
Score = 25.8 bits (54), Expect = 6.9
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 248 HGFHHQKLKLTEREEAAPKMPRGQRFSL 165
H HH++ ++ R+ AAP R R +L
Sbjct: 43 HHHHHRRRRVYRRQRAAPTQTRAPRRTL 70
>01_06_0373 - 28841462-28842850
Length = 462
Score = 25.8 bits (54), Expect = 6.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 179 VLSAFSVLPPLAQLALASDGETHEELLKAIGFP 277
+L+ F LP L A+ GE EEL+ A G P
Sbjct: 125 ILAFFLYLPVLHAQTTANFGEMGEELVHAPGIP 157
>07_01_0613 -
4535892-4536331,4536462-4536543,4537493-4537576,
4537669-4537845,4538192-4538351,4539357-4539685
Length = 423
Score = 25.4 bits (53), Expect = 9.2
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +2
Query: 182 LSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDA 289
LSAFSV P L A S G+ H+ A+ DDDA
Sbjct: 63 LSAFSVAPRLLSTAFGSRGK-HQRKDAALA-DDDDA 96
>06_03_0611 -
22721977-22722276,22722765-22722853,22722978-22723083,
22723178-22723306,22723803-22723887,22723994-22724103,
22724424-22724624,22725033-22725394,22725612-22725695,
22725791-22725916,22725999-22726161,22726378-22726536,
22727147-22727274,22727371-22727493,22727755-22727899,
22727992-22728068,22728318-22728696,22729325-22729411
Length = 950
Score = 25.4 bits (53), Expect = 9.2
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 124 VIVSIFEHIREICDGCHCRDGDSKQTNDCLHVCGLRLS 11
VI S+ + + C GC C D + T C +VCG++ S
Sbjct: 56 VINSVLDKPKFRC-GCKCVDVNG--TGSCQNVCGIQYS 90
>02_02_0421 -
10042184-10042197,10042442-10042822,10044158-10044261,
10044634-10044734,10044806-10045147,10045981-10046158,
10047696-10047776,10049190-10049449
Length = 486
Score = 25.4 bits (53), Expect = 9.2
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2
Query: 97 REICDGCHCRDGDSKQTND 41
R CDGCHC +K N+
Sbjct: 122 RVYCDGCHCSPCGNKIENE 140
>01_06_1406 -
37073548-37073822,37073892-37074111,37074200-37074246,
37074404-37074576,37075161-37075238,37075751-37075813,
37075889-37075961,37076150-37076189,37076302-37076368,
37076719-37078472,37079128-37079230,37080041-37080078,
37080221-37080347,37081944-37082152
Length = 1088
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 51 CLLSPSRQWQPSQISLMCSKMETITSQPE 137
CLL+PS + P Q + C+K ++QP+
Sbjct: 189 CLLAPSEEGHPHQSLVACNKYNP-SNQPK 216
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,068,739
Number of Sequences: 37544
Number of extensions: 153242
Number of successful extensions: 476
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 476
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 375959444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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