Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0751
(615 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0417 - 3692247-3692329,3692442-3692504,3693233-3693350,369... 67 1e-11
03_05_0107 - 20883353-20883627,20883739-20883801,20884608-208847... 66 2e-11
06_01_0108 - 860080-860162,860276-860338,860857-860974,861481-86... 63 1e-10
04_04_1623 - 34846056-34846223,34846547-34846644,34846738-348468... 49 3e-06
03_05_0976 - 29341981-29342229,29342388-29342621,29342771-293430... 29 2.9
02_01_0767 - 5709733-5709789,5709845-5709871,5710374-5710449,571... 29 2.9
06_03_0944 + 26202053-26202229,26203788-26204047,26204145-262042... 29 3.9
02_01_0418 - 3059575-3061279,3061915-3061973,3064270-3064353,306... 28 5.1
04_04_0407 - 24983491-24983575,24983655-24984015,24984367-249844... 28 6.8
02_05_0286 - 27506925-27507278,27508439-27508812,27509041-275092... 28 6.8
04_04_0872 + 28903099-28903644,28903739-28904544,28904620-28905004 27 8.9
03_02_0039 - 5213699-5214775,5214815-5215093,5215300-5215776,521... 27 8.9
>08_01_0417 -
3692247-3692329,3692442-3692504,3693233-3693350,
3694084-3694095
Length = 91
Score = 66.9 bits (156), Expect = 1e-11
Identities = 34/76 (44%), Positives = 46/76 (60%)
Frame = +1
Query: 64 MSLQEEFDQAAANVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDA 243
M LQE+F+Q A K L ++ L LY +KQATVGD + A RPG+ + +AK+DA
Sbjct: 1 MGLQEDFEQYAEKAKTLPESTSNENKLILYGLYKQATVGDVNTA-RPGIFAQRDRAKWDA 59
Query: 244 WHKLAGTSKEDAQKAY 291
W + G SKE+A Y
Sbjct: 60 WKAVEGKSKEEAMSDY 75
>03_05_0107 -
20883353-20883627,20883739-20883801,20884608-20884725,
20885012-20885023
Length = 155
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/76 (43%), Positives = 47/76 (61%)
Frame = +1
Query: 64 MSLQEEFDQAAANVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDA 243
M LQE+F++ A VK L ++ L LY +KQATVGD + +RPG+ + +AK+DA
Sbjct: 1 MGLQEDFEEYAEKVKTLPESTSNEDKLILYGLYKQATVGDVN-TSRPGIFAQRDRAKWDA 59
Query: 244 WHKLAGTSKEDAQKAY 291
W + G SKE+A Y
Sbjct: 60 WKAVEGKSKEEAMSDY 75
>06_01_0108 -
860080-860162,860276-860338,860857-860974,861481-861492
Length = 91
Score = 63.3 bits (147), Expect = 1e-10
Identities = 33/76 (43%), Positives = 44/76 (57%)
Frame = +1
Query: 64 MSLQEEFDQAAANVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDA 243
M LQEEF++ A K L ++ L LY +KQATVG RPG+ +LK + K+DA
Sbjct: 1 MGLQEEFEEFAEKAKTLPDTISNEDKLLLYGLYKQATVGPVT-TGRPGIFNLKDRYKWDA 59
Query: 244 WHKLAGTSKEDAQKAY 291
W + G SKE+A Y
Sbjct: 60 WKAVEGKSKEEAMADY 75
>04_04_1623 -
34846056-34846223,34846547-34846644,34846738-34846829,
34847096-34847202,34847385-34847490,34848108-34848547
Length = 336
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Frame = +1
Query: 70 LQEEFDQA----AANVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKF 237
L E+F A AA+ + ++P AQL LY +K AT G A +P L LK +AK+
Sbjct: 90 LDEDFSAASAFVAASAASGTSVPEQAQL-QLYGLYKIATEGPCT-APQPSALKLKARAKW 147
Query: 238 DAWHKLAGTSKEDAQKAY 291
+AWHKL E+A + Y
Sbjct: 148 NAWHKLGAMPTEEAMQKY 165
>03_05_0976 -
29341981-29342229,29342388-29342621,29342771-29343046,
29343181-29343457,29343549-29343847,29344021-29344152,
29344451-29344660,29344812-29344875,29346114-29346260,
29346477-29346760
Length = 723
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 608 RKGRKLFHCCSILCFSTLEVPFINV 534
R GRK CC IL F+ V F+NV
Sbjct: 418 RSGRKKSACCKILFFTIWNVFFVNV 442
>02_01_0767 -
5709733-5709789,5709845-5709871,5710374-5710449,
5710542-5710661,5711321-5711421,5711618-5711743,
5713504-5713596,5713694-5713816,5713889-5714032,
5714539-5714672,5714893-5715002,5715315-5715430,
5716438-5716572,5716650-5716820,5717545-5717709,
5718165-5718242,5718313-5718445,5718551-5718741,
5718842-5718914,5719001-5719056,5719142-5719300,
5719383-5719496,5719562-5719654,5720544-5720726,
5720801-5720878,5720966-5721052,5721135-5721216,
5721288-5721400,5721486-5721636,5721759-5721877,
5721966-5722163,5722377-5722442,5723837-5723957,
5724224-5724343,5724412-5724542,5725210-5725341,
5725418-5725519,5726231-5726437,5726510-5726626,
5727468-5727623,5727721-5727810,5728624-5728848,
5728969-5729091,5729202-5729284,5729459-5729618,
5730264-5730374,5730652-5730751,5731375-5731454,
5731752-5731847,5731961-5732110
Length = 1991
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -1
Query: 306 STISSVGFLGILLRSAGQFVPSVKFSFTLQV*KTRSIGWIGISNC 172
+T++ V FLG+L A V + K LQ RS+GW + +C
Sbjct: 483 NTLTLVAFLGLLSTLASSEVGAAKVYELLQGKVYRSLGWSTLFDC 527
>06_03_0944 +
26202053-26202229,26203788-26204047,26204145-26204245,
26204512-26204584,26205482-26205581
Length = 236
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 319 SYETFDDLECRLSGHPPSKCRPVC 248
S +T D+++ ++ PPS C PVC
Sbjct: 19 SSDTIDNVKAKIQVAPPSLCMPVC 42
>02_01_0418 -
3059575-3061279,3061915-3061973,3064270-3064353,
3064395-3064559
Length = 670
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 13 TRGRVYRRLTSYPHLINMSLQEEFDQAAANVKNLKAL 123
T R YR +TS+P L+N+S + LKAL
Sbjct: 496 TLSRQYRAVTSFPALLNLSANSFTSVIPPKIGELKAL 532
>04_04_0407 -
24983491-24983575,24983655-24984015,24984367-24984406,
24984466-24984468
Length = 162
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +1
Query: 220 KGKAKFDAWHKLAGTSKEDAQKAYTRDRRRSHSFHRPQRIK 342
KG AK A K A K K T+ R S +FHRP+ +K
Sbjct: 20 KGDAKAQAL-KAAKAVKSGTAKKTTKKIRTSVTFHRPKTLK 59
>02_05_0286 -
27506925-27507278,27508439-27508812,27509041-27509218,
27510878-27511105,27511215-27511316,27511415-27512131,
27512270-27512387,27512500-27512744,27512854-27513054,
27513920-27514324
Length = 973
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 223 GKAKFDAWHKLAGTSKEDAQKAYTRDRRRSHSFHRPQRIKDL 348
G DA EDA+ + +R R++ + H PQ+I++L
Sbjct: 241 GSDHLDAISAAGEDDVEDAEPSNSRKRKKRYHRHTPQQIQEL 282
>04_04_0872 + 28903099-28903644,28903739-28904544,28904620-28905004
Length = 578
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = -2
Query: 239 SNLALPFKSRRPGLLAGSASPTVACLKWAYKLRSWASVGRAFRFFTL 99
+N ALP K P A+P+ A L WA S+ +V R F F L
Sbjct: 389 TNEALP-KELHPVYSMFIATPSAASLAWAAIYGSFDAVARTFFFMAL 434
>03_02_0039 -
5213699-5214775,5214815-5215093,5215300-5215776,
5216073-5216438
Length = 732
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -3
Query: 289 RLSGHPPSKCRPVCAKR 239
RLS PP+K RP+ AKR
Sbjct: 551 RLSSTPPAKSRPILAKR 567
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,369,787
Number of Sequences: 37544
Number of extensions: 330453
Number of successful extensions: 791
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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