Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0751
(615 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g31812.1 68414.m03905 acyl-CoA binding protein / ACBP identic... 68 4e-12
At3g05420.2 68416.m00594 acyl-CoA binding family protein similar... 31 0.80
At3g05420.1 68416.m00593 acyl-CoA binding family protein similar... 31 0.80
At3g13620.1 68416.m01714 amino acid permease family protein weak... 30 1.4
At1g52410.2 68414.m05915 caldesmon-related weak similarity to Ca... 28 4.3
At1g52410.1 68414.m05914 caldesmon-related weak similarity to Ca... 28 4.3
At1g61370.1 68414.m06916 S-locus lectin protein kinase family pr... 27 9.9
>At1g31812.1 68414.m03905 acyl-CoA binding protein / ACBP identical
to acyl-CoA-binding protein (ACBP) [Arabidopsis
thaliana] SWISS-PROT:P57752
Length = 92
Score = 68.1 bits (159), Expect = 4e-12
Identities = 33/76 (43%), Positives = 46/76 (60%)
Frame = +1
Query: 64 MSLQEEFDQAAANVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDA 243
M L+EEF++ A V L LP++ LL LY +KQA G D +RPG+ +K +AK+DA
Sbjct: 1 MGLKEEFEEHAEKVNTLTELPSNEDLLILYGLYKQAKFGPVD-TSRPGMFSMKERAKWDA 59
Query: 244 WHKLAGTSKEDAQKAY 291
W + G S E+A Y
Sbjct: 60 WKAVEGKSSEEAMNDY 75
>At3g05420.2 68416.m00594 acyl-CoA binding family protein similar to
PIR|S68824|S68824 rngB protein, cytosolic (Dictyostelium
discoideum); contains Pfam profiles PF00887: Acyl CoA
binding protein, PF01344: Kelch motif
Length = 669
Score = 30.7 bits (66), Expect = 0.80
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +1
Query: 85 DQAAANVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGT 264
D +A NV + P D LL LYA ++QATVG + +P ++K+ +W L
Sbjct: 29 DSSAKNV--ISKFPDDTALL-LYALYQQATVGPCN-TPKPSAWRPVEQSKWKSWQGLGTM 84
Query: 265 SKEDAQKAYTR 297
+A + + +
Sbjct: 85 PSIEAMRLFVK 95
>At3g05420.1 68416.m00593 acyl-CoA binding family protein similar to
PIR|S68824|S68824 rngB protein, cytosolic (Dictyostelium
discoideum); contains Pfam profiles PF00887: Acyl CoA
binding protein, PF01344: Kelch motif
Length = 668
Score = 30.7 bits (66), Expect = 0.80
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +1
Query: 85 DQAAANVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGT 264
D +A NV + P D LL LYA ++QATVG + +P ++K+ +W L
Sbjct: 29 DSSAKNV--ISKFPDDTALL-LYALYQQATVGPCN-TPKPSAWRPVEQSKWKSWQGLGTM 84
Query: 265 SKEDAQKAYTR 297
+A + + +
Sbjct: 85 PSIEAMRLFVK 95
>At3g13620.1 68416.m01714 amino acid permease family protein weak
similarity to SP|Q9WTR6 Cystine/glutamate transporter
(Amino acid transport system xc-) {Mus musculus};
contains Pfam profile PF00324: Amino acid permease
Length = 478
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 155 AYKLRSWASVGRAFRFFTLAAAWSNSSWRDILI 57
AY+L A +G +FF + + W N+ W ILI
Sbjct: 314 AYQLEGMAELGFLPKFFGVRSKWFNTPWVGILI 346
>At1g52410.2 68414.m05915 caldesmon-related weak similarity to
Caldesmon (CDM) (Swiss-Prot:P12957) [Gallus gallus]
Length = 759
Score = 28.3 bits (60), Expect = 4.3
Identities = 21/83 (25%), Positives = 37/83 (44%)
Frame = +1
Query: 100 NVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKEDA 279
N N + L+L + +V D + R LLD + K +F+A H + D
Sbjct: 69 NQNNTTVTDKNTISLSLSDESEVGSVSD-ESVGRSSLLD-QIKLEFEAHHNSINQAGSDG 126
Query: 280 QKAYTRDRRRSHSFHRPQRIKDL 348
KA ++D S HR + ++++
Sbjct: 127 VKAESKDDDEELSAHRQKMLEEI 149
>At1g52410.1 68414.m05914 caldesmon-related weak similarity to
Caldesmon (CDM) (Swiss-Prot:P12957) [Gallus gallus]
Length = 755
Score = 28.3 bits (60), Expect = 4.3
Identities = 21/83 (25%), Positives = 37/83 (44%)
Frame = +1
Query: 100 NVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKEDA 279
N N + L+L + +V D + R LLD + K +F+A H + D
Sbjct: 69 NQNNTTVTDKNTISLSLSDESEVGSVSD-ESVGRSSLLD-QIKLEFEAHHNSINQAGSDG 126
Query: 280 QKAYTRDRRRSHSFHRPQRIKDL 348
KA ++D S HR + ++++
Sbjct: 127 VKAESKDDDEELSAHRQKMLEEI 149
>At1g61370.1 68414.m06916 S-locus lectin protein kinase family
protein contains Pfam domains, PF00954: S-locus
glycoprotein family, PF00069: Protein kinase domain, and
PF01453: Lectin (probable mannose binding)
Length = 814
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -2
Query: 281 WASSFEVPASLCQASNLALPFKSRRPGLLAGSASPTVACLK 159
W + E P S C N PF GL S P CLK
Sbjct: 275 WVTDLEAPVSSCDVYNTCGPF-----GLCIRSNPPKCECLK 310
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,139,410
Number of Sequences: 28952
Number of extensions: 262776
Number of successful extensions: 692
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1236350304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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