Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0749
         (597 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    25   0.56 
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    23   2.3  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   3.0  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   9.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   9.2  

>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 25.0 bits (52), Expect = 0.56
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -1

Query: 528 YIHIFVAITRLCVTKHQCFDLDQNLKRNPNAFV 430
           Y+ +F+ +  L +T  Q    +  +KR  N FV
Sbjct: 247 YLLVFIGLQSLSLTNIQLEHFEMKIKRKHNVFV 279


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = -1

Query: 519 IFVAITRLCVTKHQCFDLDQNLKRNP 442
           +F  + R+C+ +    +L +NL+ +P
Sbjct: 322 LFTTVHRICIGETMPMELIENLRNHP 347


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -2

Query: 50  KKKNSRLVLSLVPN 9
           KK+N +++L LVPN
Sbjct: 108 KKQNLKVILDLVPN 121


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 264 LIQNVMITRSFKNRLSSIQQSLVQNKFDNNN 356
           LIQN++        LS+    L QN   NNN
Sbjct: 358 LIQNIIQEMKNDVLLSNNDVYLYQNTMSNNN 388


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 264 LIQNVMITRSFKNRLSSIQQSLVQNKFDNNN 356
           LIQN++        LS+    L QN   NNN
Sbjct: 396 LIQNIIQEMKNDVLLSNNDVYLYQNTMSNNN 426


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,317
Number of Sequences: 438
Number of extensions: 2540
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)