Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0746
(607 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 118 8e-27
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 108 7e-24
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 108 7e-24
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 102 4e-22
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 102 4e-22
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 96 4e-20
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 95 5e-20
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 93 4e-19
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 93 4e-19
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 72 5e-13
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 72 5e-13
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 72 5e-13
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 72 7e-13
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 64 1e-10
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 60 2e-09
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 59 5e-09
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 59 5e-09
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 59 5e-09
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 59 5e-09
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 59 5e-09
U14102-1|AAC46495.1| 299|Drosophila melanogaster putative rever... 57 2e-08
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 46 3e-05
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 32 0.53
BT022556-1|AAY54972.1| 438|Drosophila melanogaster IP11886p pro... 30 2.1
AE014297-579|AAF54047.1| 438|Drosophila melanogaster CG14606-PA... 30 2.1
AE014298-2744|AAF48863.1| 1895|Drosophila melanogaster CG15040-P... 29 3.7
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 29 4.9
AY128484-1|AAM75077.1| 533|Drosophila melanogaster RE61939p pro... 28 8.6
AE014134-2227|AAF53210.1| 533|Drosophila melanogaster CG5525-PA... 28 8.6
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 118 bits (283), Expect = 8e-27
Identities = 64/183 (34%), Positives = 90/183 (49%)
Frame = +3
Query: 57 WFRKWRIDINPAKSTAVLFQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWVRKVKYLGVTL 236
W R+W I IN +KS V F P+P KYLGV L
Sbjct: 704 WARRWNIGINSSKSNNVCFTLKRRTPPPVYIEEV-----------PVPQPNAAKYLGVLL 752
Query: 237 DASMTFRPHIKTVRNRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPIMTYASVVFAH 416
D +TF H+ +R R + + Y ++ RSK+SL NK+T+YK + P Y ++
Sbjct: 753 DRRLTFSKHVTDIRTRLRAKVAKHYWLLSSRSKLSLSNKLTIYKQILAPNWKYGCQIWGL 812
Query: 417 AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMKSASERYFDKAMRHD 596
A +HI +Q++Q++ RL G WFVRN LH DL L ++ + S RY D+ RH
Sbjct: 813 ACDSHIKRIQAIQNKVARLITGCEWFVRNTTLHRDLKLATVFDEINKHSSRYHDRLERHR 872
Query: 597 NRL 605
NRL
Sbjct: 873 NRL 875
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 108 bits (259), Expect = 7e-24
Identities = 51/163 (31%), Positives = 86/163 (52%)
Frame = +3
Query: 57 WFRKWRIDINPAKSTAVLFQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWVRKVKYLGVTL 236
+++KW+I INP K+ A+ F + PI WV ++YLG+
Sbjct: 725 YYKKWKIKINPNKTNAIFFTK-------RRKPRYLPDRQLRILDSPIQWVDNIRYLGIIF 777
Query: 237 DASMTFRPHIKTVRNRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPIMTYASVVFAH 416
D +TF+ HI + I+ LYP+I ++SK+S+ NK+ ++KT PI+ Y S V+
Sbjct: 778 DKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGR 837
Query: 417 AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQK 545
A+THI LQ Q++ +L + P++ LH G++ +Q+
Sbjct: 838 CAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGVQKVQQ 880
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 108 bits (259), Expect = 7e-24
Identities = 51/163 (31%), Positives = 86/163 (52%)
Frame = +3
Query: 57 WFRKWRIDINPAKSTAVLFQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWVRKVKYLGVTL 236
+++KW+I INP K+ A+ F + PI WV ++YLG+
Sbjct: 673 YYKKWKIKINPNKTNAIFFTK-------RRKPRYLPDRQLRILDSPIQWVDNIRYLGIIF 725
Query: 237 DASMTFRPHIKTVRNRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPIMTYASVVFAH 416
D +TF+ HI + I+ LYP+I ++SK+S+ NK+ ++KT PI+ Y S V+
Sbjct: 726 DKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGR 785
Query: 417 AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQK 545
A+THI LQ Q++ +L + P++ LH G++ +Q+
Sbjct: 786 CAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGVQKVQQ 828
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 102 bits (244), Expect = 4e-22
Identities = 50/137 (36%), Positives = 79/137 (57%)
Frame = +3
Query: 195 IPWVRKVKYLGVTLDASMTFRPHIKTVRNRAAFILGRLYPMICKRSKMSLRNKVTLYKTC 374
IP +V YLGV LD +T+R HI+ L+ +I RS +SL K LY +
Sbjct: 730 IPQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSV 789
Query: 375 IRPIMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMK 554
++PI TY S ++ +A+R++ID +Q QSR R+ GAPW++RN ++H DL ++ + + +
Sbjct: 790 LKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIA 849
Query: 555 SASERYFDKAMRHDNRL 605
+Y +K H N L
Sbjct: 850 EKKTKYNEKLTTHTNPL 866
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 102 bits (244), Expect = 4e-22
Identities = 50/137 (36%), Positives = 79/137 (57%)
Frame = +3
Query: 195 IPWVRKVKYLGVTLDASMTFRPHIKTVRNRAAFILGRLYPMICKRSKMSLRNKVTLYKTC 374
IP +V YLGV LD +T+R HI+ L+ +I RS +SL K LY +
Sbjct: 730 IPQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSV 789
Query: 375 IRPIMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMK 554
++PI TY S ++ +A+R++ID +Q QSR R+ GAPW++RN ++H DL ++ + + +
Sbjct: 790 LKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIA 849
Query: 555 SASERYFDKAMRHDNRL 605
+Y +K H N L
Sbjct: 850 EKKTKYNEKLTTHTNPL 866
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 95.9 bits (228), Expect = 4e-20
Identities = 45/127 (35%), Positives = 75/127 (59%)
Frame = +3
Query: 192 PIPWVRKVKYLGVTLDASMTFRPHIKTVRNRAAFILGRLYPMICKRSKMSLRNKVTLYKT 371
P+P +V YLGV LD +T+R HI+ + + L+ +I S +SL +KV LY +
Sbjct: 731 PLPKADEVTYLGVHLDRRLTWRRHIEAKKTQLKLKANNLHWLINSGSPLSLDHKVLLYNS 790
Query: 372 CIRPIMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYM 551
++PI TY S ++ +A+ ++ID +Q QS+ R GAPW+VR+ ++ DL + S+ +
Sbjct: 791 ILKPIWTYGSQLWGNASNSNIDIIQRAQSKILRTITGAPWYVRSENIQRDLNIPSVTNAI 850
Query: 552 KSASERY 572
E+Y
Sbjct: 851 TELKEKY 857
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 95.5 bits (227), Expect = 5e-20
Identities = 45/132 (34%), Positives = 76/132 (57%)
Frame = +3
Query: 210 KVKYLGVTLDASMTFRPHIKTVRNRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPIM 389
+ KYLG+TLD +TF PH+K R + +L ++ ++S M+LR K +Y C+ PI
Sbjct: 750 QAKYLGITLDKRLTFGPHLKATTRRCYQRMQQLRWLLNRKSTMTLRAKRAVYVHCVAPIW 809
Query: 390 TYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMKSASER 569
Y ++ AA+++ + +Q LQ+R R P++VR LH DL L ++++ + + R
Sbjct: 810 LYGIQIWGIAAKSNYNRIQVLQNRAMRAITDCPYYVRGTTLHRDLNLHTVEEQISRHTSR 869
Query: 570 YFDKAMRHDNRL 605
Y D+ RH + L
Sbjct: 870 YSDRLRRHHSIL 881
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 92.7 bits (220), Expect = 4e-19
Identities = 42/130 (32%), Positives = 77/130 (59%)
Frame = +3
Query: 216 KYLGVTLDASMTFRPHIKTVRNRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPIMTY 395
KYLG+TLD +TF HI ++ + R+ +I R+K+SL KV +YK+ + P + Y
Sbjct: 751 KYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFY 810
Query: 396 ASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMKSASERYF 575
V+ AA++H++ ++ LQ++ R GAPW++R D+ DL + + +++ +++Y
Sbjct: 811 GLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYM 870
Query: 576 DKAMRHDNRL 605
++ H N L
Sbjct: 871 ERLNVHPNSL 880
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 92.7 bits (220), Expect = 4e-19
Identities = 42/130 (32%), Positives = 77/130 (59%)
Frame = +3
Query: 216 KYLGVTLDASMTFRPHIKTVRNRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPIMTY 395
KYLG+TLD +TF HI ++ + R+ +I R+K+SL KV +YK+ + P + Y
Sbjct: 553 KYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFY 612
Query: 396 ASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMKSASERYF 575
V+ AA++H++ ++ LQ++ R GAPW++R D+ DL + + +++ +++Y
Sbjct: 613 GLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYL 672
Query: 576 DKAMRHDNRL 605
++ H N L
Sbjct: 673 ERLNVHPNSL 682
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 72.1 bits (169), Expect = 5e-13
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 1/184 (0%)
Frame = +3
Query: 57 WFRKWRIDINPAKSTAVLFQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWVRKVKYLGVTL 236
W +KW I IN K+ +LF GQ + K +YLG+ L
Sbjct: 764 WSKKWDIAINAKKTGHILFSLKKEQTNIYTPPLIN--------GQRAAKLNKQRYLGLML 815
Query: 237 DASMTFRPHIKTVRNRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPIMTYASVVFAH 416
D +TF H+ ++ + +L +I K S + K+ L+K + PI YA ++
Sbjct: 816 DRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGS 875
Query: 417 -AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMKSASERYFDKAMRH 593
+ T +Q++++++ R + A + R D+ ++S + AS+RY + H
Sbjct: 876 LVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQRYANSLTDH 935
Query: 594 DNRL 605
+N L
Sbjct: 936 ENPL 939
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 72.1 bits (169), Expect = 5e-13
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 1/184 (0%)
Frame = +3
Query: 57 WFRKWRIDINPAKSTAVLFQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWVRKVKYLGVTL 236
W +KW I IN K+ +LF GQ + K +YLG+ L
Sbjct: 764 WSKKWDIAINAKKTGHILFSLKKEQTNIYTPPLIN--------GQRAAKLNKQRYLGLML 815
Query: 237 DASMTFRPHIKTVRNRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPIMTYASVVFAH 416
D +TF H+ ++ + +L +I K S + K+ L+K + PI YA ++
Sbjct: 816 DRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGS 875
Query: 417 -AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMKSASERYFDKAMRH 593
+ T +Q++++++ R + A + R D+ ++S + AS+RY + H
Sbjct: 876 LVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQRYANSLTDH 935
Query: 594 DNRL 605
+N L
Sbjct: 936 ENPL 939
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 72.1 bits (169), Expect = 5e-13
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 1/184 (0%)
Frame = +3
Query: 57 WFRKWRIDINPAKSTAVLFQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWVRKVKYLGVTL 236
W +KW I IN K+ +LF GQ + K +YLG+ L
Sbjct: 764 WSKKWDIAINAKKTGHILFSLKKEQTNIYTPPLIN--------GQRAAKLNKQRYLGLML 815
Query: 237 DASMTFRPHIKTVRNRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPIMTYASVVFAH 416
D +TF H+ ++ + +L +I K S + K+ L+K + PI YA ++
Sbjct: 816 DRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGS 875
Query: 417 -AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMKSASERYFDKAMRH 593
+ T +Q++++++ R + A + R D+ ++S + AS+RY + H
Sbjct: 876 LVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQRYANSLTDH 935
Query: 594 DNRL 605
+N L
Sbjct: 936 ENPL 939
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 71.7 bits (168), Expect = 7e-13
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 1/184 (0%)
Frame = +3
Query: 57 WFRKWRIDINPAKSTAVLFQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWVRKVKYLGVTL 236
W +KW I IN K+ +LF GQ + K +YLG+ L
Sbjct: 317 WSKKWDIAINAKKTGHILFSLKKEQTNIYTPPLIN--------GQRAAKLNKQRYLGLML 368
Query: 237 DASMTFRPHIKTVRNRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPIMTYASVVFAH 416
D +TF H+ ++ + +L +I K S + K+ L+K + PI YA ++
Sbjct: 369 DRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGS 428
Query: 417 -AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMKSASERYFDKAMRH 593
+ T +Q++++++ R + A + R D+ ++S + AS+RY + H
Sbjct: 429 LVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDETFDKASQRYANSLTDH 488
Query: 594 DNRL 605
+N L
Sbjct: 489 ENPL 492
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 64.5 bits (150), Expect = 1e-10
Identities = 45/182 (24%), Positives = 79/182 (43%), Gaps = 1/182 (0%)
Frame = +3
Query: 57 WFRKWRIDINPAKSTAVLFQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWVRKVKYLGVTL 236
W KW I +N AK+ V+F GQ I K YLGVTL
Sbjct: 765 WADKWGISVNAAKTGHVIFTLKNDLPTNSMNVKIK--------GQTIKKESKQSYLGVTL 816
Query: 237 DASMTFRPHIKTVRNRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPIMTYASVVFAH 416
D+ +T H+ + + + +L ++ RSK+ + K+ + K+ + PI YA +
Sbjct: 817 DSKLTLSSHVTKLLGKYSTAYRKLTWILNGRSKLPTKTKILILKSVLSPIWQYAIAAWGP 876
Query: 417 -AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMKSASERYFDKAMRH 593
I +Q ++R R A + RN + D G+++++++ + A R+ + H
Sbjct: 877 LVTDAQIRRVQVEENRKIRDICRAGRYTRNQTIRDLFGVKTVEEFYQQAMHRFSETIKSH 936
Query: 594 DN 599
N
Sbjct: 937 PN 938
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 60.1 bits (139), Expect = 2e-09
Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 1/182 (0%)
Frame = +3
Query: 57 WFRKWRIDINPAKSTAVLFQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWVRKVKYLGVTL 236
W KW I +N AK+ V+F GQ I K YLGV L
Sbjct: 753 WADKWGISVNAAKTGHVIFTLKNDLPTSLRTMKIK--------GQVIKIESKQSYLGVIL 804
Query: 237 DASMTFRPHIKTVRNRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPIMTYASVVFAH 416
D+ +T H+ + + ++ ++ +RSK+ + K+ + K+ + PI YA +
Sbjct: 805 DSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILKSVLSPIWQYAIAAWGP 864
Query: 417 -AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMKSASERYFDKAMRH 593
I +Q ++R R A + N + D G+++++++ + A R+ + H
Sbjct: 865 LVTDAQIRRIQVEENRKMRDICRAGRYTSNQTIRDRYGIKTVEEFYQQALHRFSETIKSH 924
Query: 594 DN 599
N
Sbjct: 925 PN 926
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 58.8 bits (136), Expect = 5e-09
Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 1/182 (0%)
Frame = +3
Query: 57 WFRKWRIDINPAKSTAVLFQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWVRKVKYLGVTL 236
W KW I +N AK+ V++ GQ I K YLGV L
Sbjct: 637 WADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIK--------GQAIKKESKQSYLGVIL 688
Query: 237 DASMTFRPHIKTVRNRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPIMTYASVVFAH 416
D+ +T PH+ V + ++ ++ +RSK+ K+ + K+ + PI YA +
Sbjct: 689 DSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYAIAAWGP 748
Query: 417 -AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMKSASERYFDKAMRH 593
I +Q ++R R A + +N + D +++++++ + A R+ + H
Sbjct: 749 LVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVHRFSETTKSH 808
Query: 594 DN 599
N
Sbjct: 809 PN 810
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 58.8 bits (136), Expect = 5e-09
Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 1/182 (0%)
Frame = +3
Query: 57 WFRKWRIDINPAKSTAVLFQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWVRKVKYLGVTL 236
W KW I +N AK+ V++ GQ I K YLGV L
Sbjct: 753 WADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIK--------GQAIKKESKQSYLGVIL 804
Query: 237 DASMTFRPHIKTVRNRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPIMTYASVVFAH 416
D+ +T PH+ V + ++ ++ +RSK+ K+ + K+ + PI YA +
Sbjct: 805 DSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYAIAAWGP 864
Query: 417 -AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMKSASERYFDKAMRH 593
I +Q ++R R A + +N + D +++++++ + A R+ + H
Sbjct: 865 LVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVHRFSETTKSH 924
Query: 594 DN 599
N
Sbjct: 925 PN 926
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 58.8 bits (136), Expect = 5e-09
Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 1/182 (0%)
Frame = +3
Query: 57 WFRKWRIDINPAKSTAVLFQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWVRKVKYLGVTL 236
W KW I +N AK+ V++ GQ I K YLGV L
Sbjct: 753 WADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIK--------GQAIKKESKQSYLGVIL 804
Query: 237 DASMTFRPHIKTVRNRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPIMTYASVVFAH 416
D+ +T PH+ V + ++ ++ +RSK+ K+ + K+ + PI YA +
Sbjct: 805 DSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYAIAAWGP 864
Query: 417 -AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMKSASERYFDKAMRH 593
I +Q ++R R A + +N + D +++++++ + A R+ + H
Sbjct: 865 LVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVHRFSETTKSH 924
Query: 594 DN 599
N
Sbjct: 925 PN 926
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 58.8 bits (136), Expect = 5e-09
Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 1/182 (0%)
Frame = +3
Query: 57 WFRKWRIDINPAKSTAVLFQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWVRKVKYLGVTL 236
W KW I +N AK+ V++ GQ I K YLGV L
Sbjct: 715 WADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIK--------GQAIKKESKQSYLGVIL 766
Query: 237 DASMTFRPHIKTVRNRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPIMTYASVVFAH 416
D+ +T PH+ V + ++ ++ +RSK+ K+ + K+ + PI YA +
Sbjct: 767 DSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYAIAAWGP 826
Query: 417 -AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMKSASERYFDKAMRH 593
I +Q ++R R A + +N + D +++++++ + A R+ + H
Sbjct: 827 LVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVHRFSETTKSH 886
Query: 594 DN 599
N
Sbjct: 887 PN 888
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 58.8 bits (136), Expect = 5e-09
Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 1/182 (0%)
Frame = +3
Query: 57 WFRKWRIDINPAKSTAVLFQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWVRKVKYLGVTL 236
W KW I +N AK+ V++ GQ I K YLGV L
Sbjct: 753 WADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIK--------GQAIKKESKQSYLGVIL 804
Query: 237 DASMTFRPHIKTVRNRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPIMTYASVVFAH 416
D+ +T PH+ V + ++ ++ +RSK+ K+ + K+ + PI YA +
Sbjct: 805 DSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYAIAAWGP 864
Query: 417 -AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMKSASERYFDKAMRH 593
I +Q ++R R A + +N + D +++++++ + A R+ + H
Sbjct: 865 LVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVHRFSETTKSH 924
Query: 594 DN 599
N
Sbjct: 925 PN 926
>U14102-1|AAC46495.1| 299|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 299
Score = 56.8 bits (131), Expect = 2e-08
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
Frame = +3
Query: 186 GQPIPWVRKVKYLGVTLDASMTFRPHIKTVRNRAAFILGRLYPMICKRSKMSLRNKVTLY 365
GQ I K YLGV LD+ +T H+ + + ++ ++ +RSK+ + K+ +
Sbjct: 3 GQVIKIESKQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLIL 62
Query: 366 KTCIRPIMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQ 542
K+ + PI YA + I +Q ++R R A + N + D G+++++
Sbjct: 63 KSVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTSNQTIRDRYGIKTVE 122
Query: 543 KYMKSASERYFDKAMRHDN 599
++ + A R+ + H N
Sbjct: 123 EFYQQALHRFSETIKSHPN 141
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 46.4 bits (105), Expect = 3e-05
Identities = 23/79 (29%), Positives = 42/79 (53%)
Frame = +3
Query: 186 GQPIPWVRKVKYLGVTLDASMTFRPHIKTVRNRAAFILGRLYPMICKRSKMSLRNKVTLY 365
G+ +P+VR +YLG+T+ M F HI ++R R ++G L ++ S R + T+Y
Sbjct: 725 GRNLPYVRSCRYLGITVSEGMKFLTHIASLRQRMTGVVGALARVLRADWGFSPRARRTIY 784
Query: 366 KTCIRPIMTYASVVFAHAA 422
+ P + + + V+ A
Sbjct: 785 DGLMAPCVLFGAPVWYDTA 803
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 32.3 bits (70), Expect = 0.53
Identities = 21/97 (21%), Positives = 45/97 (46%)
Frame = +3
Query: 195 IPWVRKVKYLGVTLDASMTFRPHIKTVRNRAAFILGRLYPMICKRSKMSLRNKVTLYKTC 374
IP V +K LG+TL+ + HI + + L + + + + + + K
Sbjct: 731 IPSVTSLKILGITLNNKYKWNTHINLLLPKLHNKLNIIKCLSSLKFNCNTHTLLNVAKAT 790
Query: 375 IRPIMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGA 485
I + Y ++ HA ++ ++ +++ + RLA+GA
Sbjct: 791 IIAKLEYGLFLYGHAPKSILNKIKTPFNSAIRLALGA 827
>BT022556-1|AAY54972.1| 438|Drosophila melanogaster IP11886p
protein.
Length = 438
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Frame = -1
Query: 208 LTQGIGW------PKRVIGGVIFLLLMREEISGEFPL*NNTAVLFAGL 83
+T+ I W P I G+IF+L++ ++SG F + N T+ +FA L
Sbjct: 226 VTESISWRDFINVPTLKIFGLIFVLIICNQLSGSFAIFNYTSHIFAEL 273
>AE014297-579|AAF54047.1| 438|Drosophila melanogaster CG14606-PA
protein.
Length = 438
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Frame = -1
Query: 208 LTQGIGW------PKRVIGGVIFLLLMREEISGEFPL*NNTAVLFAGL 83
+T+ I W P I G+IF+L++ ++SG F + N T+ +FA L
Sbjct: 226 VTESISWRDFINVPTLKIFGLIFVLIICNQLSGSFAIFNYTSHIFAEL 273
>AE014298-2744|AAF48863.1| 1895|Drosophila melanogaster CG15040-PA
protein.
Length = 1895
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Frame = +2
Query: 143 PH*EEKYHSPD---HP-LRP-TYTLGQEG*VPGSHPGCIHDIPPTHKNSPQPCRI 292
P+ +HSP HP L P +T P HPG P KNSPQP R+
Sbjct: 698 PNSPAHHHSPTPHPHPHLHPHPHTYAHSHPHPHPHPGMQAGNPMASKNSPQPHRL 752
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +3
Query: 186 GQPIPWVRKVKYLGVTLDASMTFRPHIKTVRNRAAF---ILGRLYPMI 320
G I +KYLGV +D ++F+ H + +AA L R+ P +
Sbjct: 708 GVEIASAETLKYLGVLIDRRLSFKAHARYASKKAAMTAAALARIMPNV 755
>AY128484-1|AAM75077.1| 533|Drosophila melanogaster RE61939p
protein.
Length = 533
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/34 (32%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 41 VSPLTVVPKMAHRHQPGEKHSSV-ISKGKLTAYF 139
++P+ V ++ +RH GEK++ + + KG +T F
Sbjct: 464 LNPIATVTELRNRHAQGEKNAGINVRKGAITDIF 497
>AE014134-2227|AAF53210.1| 533|Drosophila melanogaster CG5525-PA
protein.
Length = 533
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/34 (32%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 41 VSPLTVVPKMAHRHQPGEKHSSV-ISKGKLTAYF 139
++P+ V ++ +RH GEK++ + + KG +T F
Sbjct: 464 LNPIATVTELRNRHAQGEKNAGINVRKGAITDIF 497
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,367,056
Number of Sequences: 53049
Number of extensions: 656390
Number of successful extensions: 2028
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2019
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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