Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0744
         (573 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VB08 Cluster: E3 ubiquitin-protein ligase RING1; n=3;...    49   7e-05
UniRef50_Q16MR9 Cluster: Ring finger protein; n=4; Endopterygota...    47   4e-04
UniRef50_Q8ID36 Cluster: Putative uncharacterized protein MAL13P...    34   2.1  
UniRef50_A0D8L3 Cluster: Chromosome undetermined scaffold_41, wh...    32   8.3  

>UniRef50_Q9VB08 Cluster: E3 ubiquitin-protein ligase RING1; n=3;
           Diptera|Rep: E3 ubiquitin-protein ligase RING1 -
           Drosophila melanogaster (Fruit fly)
          Length = 435

 Score = 49.2 bits (112), Expect = 7e-05
 Identities = 18/22 (81%), Positives = 21/22 (95%)
 Frame = -3

Query: 568 QIIDKFWKVNKPLEMFYSWKKT 503
           Q+ DKFWKVNKP+EM+YSWKKT
Sbjct: 414 QVNDKFWKVNKPMEMYYSWKKT 435


>UniRef50_Q16MR9 Cluster: Ring finger protein; n=4;
           Endopterygota|Rep: Ring finger protein - Aedes aegypti
           (Yellowfever mosquito)
          Length = 395

 Score = 46.8 bits (106), Expect = 4e-04
 Identities = 17/22 (77%), Positives = 21/22 (95%)
 Frame = -3

Query: 568 QIIDKFWKVNKPLEMFYSWKKT 503
           Q+ +KFWKVNKPLEM+YSWKK+
Sbjct: 374 QVNEKFWKVNKPLEMYYSWKKS 395


>UniRef50_Q8ID36 Cluster: Putative uncharacterized protein
           MAL13P1.339; n=1; Plasmodium falciparum 3D7|Rep:
           Putative uncharacterized protein MAL13P1.339 -
           Plasmodium falciparum (isolate 3D7)
          Length = 350

 Score = 34.3 bits (75), Expect = 2.1
 Identities = 16/29 (55%), Positives = 18/29 (62%)
 Frame = +1

Query: 379 SQFKKYSFYLYIFRFHYEIGFTAYHHFSY 465
           S FK YSFY YIF  +Y+I F   H  SY
Sbjct: 172 SFFKNYSFYKYIFTPNYKICFLCIHKNSY 200


>UniRef50_A0D8L3 Cluster: Chromosome undetermined scaffold_41, whole
            genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_41, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 2732

 Score = 32.3 bits (70), Expect = 8.3
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -3

Query: 562  IDKFWKVNKPLEMFYSWKKT*K*DTF 485
            I+ FWK NK L+M Y+W++  K D F
Sbjct: 1383 IEYFWKQNKNLDMKYNWRQIIKNDDF 1408


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 438,984,700
Number of Sequences: 1657284
Number of extensions: 7178874
Number of successful extensions: 13559
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13527
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39154548218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)