Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0744
         (573 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y10571-1|CAA71596.1|  336|Homo sapiens dinG protein.                   32   1.6  
BC012583-1|AAH12583.1|  336|Homo sapiens ring finger protein 2 p...    32   1.6  
AL109865-6|CAC00611.1|  336|Homo sapiens ring finger protein 2 p...    32   1.6  
AL109865-5|CAI17850.1|  264|Homo sapiens ring finger protein 2 p...    32   1.6  
AF141327-1|AAD29717.1|  336|Homo sapiens ring finger protein BAP...    32   1.6  

>Y10571-1|CAA71596.1|  336|Homo sapiens dinG protein.
          Length = 336

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 9/17 (52%), Positives = 16/17 (94%)
 Frame = -3

Query: 565 IIDKFWKVNKPLEMFYS 515
           + +K+WKVNKP+E++Y+
Sbjct: 314 VSEKYWKVNKPMELYYA 330


>BC012583-1|AAH12583.1|  336|Homo sapiens ring finger protein 2
           protein.
          Length = 336

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 9/17 (52%), Positives = 16/17 (94%)
 Frame = -3

Query: 565 IIDKFWKVNKPLEMFYS 515
           + +K+WKVNKP+E++Y+
Sbjct: 314 VSEKYWKVNKPMELYYA 330


>AL109865-6|CAC00611.1|  336|Homo sapiens ring finger protein 2
           protein.
          Length = 336

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 9/17 (52%), Positives = 16/17 (94%)
 Frame = -3

Query: 565 IIDKFWKVNKPLEMFYS 515
           + +K+WKVNKP+E++Y+
Sbjct: 314 VSEKYWKVNKPMELYYA 330


>AL109865-5|CAI17850.1|  264|Homo sapiens ring finger protein 2
           protein.
          Length = 264

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 9/17 (52%), Positives = 16/17 (94%)
 Frame = -3

Query: 565 IIDKFWKVNKPLEMFYS 515
           + +K+WKVNKP+E++Y+
Sbjct: 242 VSEKYWKVNKPMELYYA 258


>AF141327-1|AAD29717.1|  336|Homo sapiens ring finger protein BAP-1
           protein.
          Length = 336

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 9/17 (52%), Positives = 16/17 (94%)
 Frame = -3

Query: 565 IIDKFWKVNKPLEMFYS 515
           + +K+WKVNKP+E++Y+
Sbjct: 314 VSEKYWKVNKPMELYYA 330


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,264,156
Number of Sequences: 237096
Number of extensions: 1039185
Number of successful extensions: 1222
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1222
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)