Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0744
         (573 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058535-1|AAL13764.1|  435|Drosophila melanogaster LD23953p pro...    49   4e-06
AJ001514-1|CAA04797.1|  435|Drosophila melanogaster DRING protei...    49   4e-06
AE014297-4161|AAF56737.1|  435|Drosophila melanogaster CG5595-PA...    49   4e-06

>AY058535-1|AAL13764.1|  435|Drosophila melanogaster LD23953p
           protein.
          Length = 435

 Score = 49.2 bits (112), Expect = 4e-06
 Identities = 18/22 (81%), Positives = 21/22 (95%)
 Frame = -3

Query: 568 QIIDKFWKVNKPLEMFYSWKKT 503
           Q+ DKFWKVNKP+EM+YSWKKT
Sbjct: 414 QVNDKFWKVNKPMEMYYSWKKT 435


>AJ001514-1|CAA04797.1|  435|Drosophila melanogaster DRING protein
           protein.
          Length = 435

 Score = 49.2 bits (112), Expect = 4e-06
 Identities = 18/22 (81%), Positives = 21/22 (95%)
 Frame = -3

Query: 568 QIIDKFWKVNKPLEMFYSWKKT 503
           Q+ DKFWKVNKP+EM+YSWKKT
Sbjct: 414 QVNDKFWKVNKPMEMYYSWKKT 435


>AE014297-4161|AAF56737.1|  435|Drosophila melanogaster CG5595-PA
           protein.
          Length = 435

 Score = 49.2 bits (112), Expect = 4e-06
 Identities = 18/22 (81%), Positives = 21/22 (95%)
 Frame = -3

Query: 568 QIIDKFWKVNKPLEMFYSWKKT 503
           Q+ DKFWKVNKP+EM+YSWKKT
Sbjct: 414 QVNDKFWKVNKPMEMYYSWKKT 435


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,391,905
Number of Sequences: 53049
Number of extensions: 318017
Number of successful extensions: 701
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)