Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0742
         (563 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   1.8  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   1.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.4  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   3.2  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    21   9.6  

>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 424 DSPESL*MKNTKSPN 468
           DSP S+ M NT +PN
Sbjct: 111 DSPSSMHMANTAAPN 125


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 424 DSPESL*MKNTKSPN 468
           DSP S+ M NT +PN
Sbjct: 113 DSPSSMHMANTAAPN 127


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 95   RCCTTARPSIRSQSSS*GLLP 157
            RCC  + P +RS +   GL+P
Sbjct: 975  RCCGGSFPLLRSLNRGLGLIP 995


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = +2

Query: 2   CRNSARGTSRRGSRCEGCTYCSRKSMGRSCCRCC 103
           C + A G       CEGC    R+S+ ++    C
Sbjct: 191 CGDRASGYHYNALTCEGCKGFFRRSITKNAVYQC 224


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 485 GLLLQFHLPSLQYRP 529
           G +LQ H+  L Y P
Sbjct: 84  GTILQLHIYDLHYNP 98


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,854
Number of Sequences: 336
Number of extensions: 2823
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)