Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0741
         (519 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81131-3|CAB03424.1|  438|Caenorhabditis elegans Hypothetical pr...    31   0.65 
AL032632-5|CAA21585.1|  297|Caenorhabditis elegans Hypothetical ...    29   1.5  
Z74474-3|CAE17872.1|  147|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z79639-2|CAB01915.1|  367|Caenorhabditis elegans Hypothetical pr...    27   6.1  
Z78412-10|CAD62041.1|  220|Caenorhabditis elegans Hypothetical p...    27   8.0  

>Z81131-3|CAB03424.1|  438|Caenorhabditis elegans Hypothetical
           protein T24D1.4 protein.
          Length = 438

 Score = 30.7 bits (66), Expect = 0.65
 Identities = 19/67 (28%), Positives = 35/67 (52%)
 Frame = +2

Query: 125 TLRLKIMHTKNVFFIFYKHLFIIVLLMETIILTILREIYYWRPYIVYTLSIFVINKY*IV 304
           +LR     T +V  IF+K LFII  L+  +   +    YY  PY+++ LS    ++  ++
Sbjct: 346 SLRFMTTSTPSVH-IFHKILFIIASLLVLVPAHLFEMRYYIIPYVLWRLSTVNNSRKSLL 404

Query: 305 VLNLLDE 325
            L ++ +
Sbjct: 405 FLEIISQ 411


>AL032632-5|CAA21585.1|  297|Caenorhabditis elegans Hypothetical
           protein Y11D7A.9 protein.
          Length = 297

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = +2

Query: 170 FYKHLFIIVLLMETIILTILREIYYWRPYIVYTLSIFVINKY*IVVLNL 316
           + K LF  + ++ T IL I   I YWR  I +   +F + +Y  V LN+
Sbjct: 209 YLKILFTSLYVLSTPIL-IASFILYWRKCITWAYDVFALCEYSGVFLNI 256


>Z74474-3|CAE17872.1|  147|Caenorhabditis elegans Hypothetical
           protein K10C8.4 protein.
          Length = 147

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +2

Query: 194 VLLMETIILTILREIYYWRPYIVYTLSIF 280
           +L MET+ L IL  I+Y++ +I    SIF
Sbjct: 79  LLPMETVFLAILLIIFYYKLFITIGCSIF 107


>Z79639-2|CAB01915.1|  367|Caenorhabditis elegans Hypothetical
           protein F54E4.2 protein.
          Length = 367

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 12/39 (30%), Positives = 24/39 (61%)
 Frame = +2

Query: 176 KHLFIIVLLMETIILTILREIYYWRPYIVYTLSIFVINK 292
           KH  +I  + + ++ TI++ IY    ++   L+I+V+NK
Sbjct: 2   KHFILIFPIGDDVMGTIIQTIYSVIVFVGIILNIYVVNK 40


>Z78412-10|CAD62041.1|  220|Caenorhabditis elegans Hypothetical
           protein M176.11 protein.
          Length = 220

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -3

Query: 298 SIFIYYKYRQCVDNIWSPIVYFS 230
           ++F Y+ YR  V ++ SPIV+ +
Sbjct: 88  NVFYYFSYRDIVTSVSSPIVFLA 110


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,971,215
Number of Sequences: 27780
Number of extensions: 190715
Number of successful extensions: 435
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 434
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)