Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0740
         (629 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    25   0.69 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   3.7  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 547 YVYTYFCCLIISILR 503
           + YTYF C+I+ I R
Sbjct: 156 FYYTYFLCVIVCIFR 170


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 219 NNLIVYKRFTDLTEN*YFSLY 157
           NN++   RFT   +N Y+S Y
Sbjct: 164 NNVVATGRFTFHKKNLYYSFY 184


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,440
Number of Sequences: 336
Number of extensions: 2757
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)