BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0740
(629 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060751-1|AAL28299.1| 242|Drosophila melanogaster GH20208p pro... 31 1.3
AE014134-1569|AAF52715.1| 242|Drosophila melanogaster CG9483-PA... 31 1.3
>AY060751-1|AAL28299.1| 242|Drosophila melanogaster GH20208p
protein.
Length = 242
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = -2
Query: 424 SYFLEYIQ*GIPARYILSDIYKIFEYLQIVFFLNILFVN 308
+YF +I +P +LS + I + I+FF+N+LF+N
Sbjct: 137 AYFPMFI---VPGDLLLSCLVAIANIMMIIFFINVLFIN 172
>AE014134-1569|AAF52715.1| 242|Drosophila melanogaster CG9483-PA
protein.
Length = 242
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = -2
Query: 424 SYFLEYIQ*GIPARYILSDIYKIFEYLQIVFFLNILFVN 308
+YF +I +P +LS + I + I+FF+N+LF+N
Sbjct: 137 AYFPMFI---VPGDLLLSCLVAIANIMMIIFFINVLFIN 172
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,881,569
Number of Sequences: 53049
Number of extensions: 358442
Number of successful extensions: 535
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 535
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -