Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0740
         (629 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF099922-1|AAK21410.2|  509|Caenorhabditis elegans Hypothetical ...    31   0.51 
AC006634-1|AAF39796.1|  231|Caenorhabditis elegans Hypothetical ...    31   0.68 
Z74033-5|CAF31473.1|  333|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z81047-3|CAB02829.1|  389|Caenorhabditis elegans Hypothetical pr...    29   3.6  
AC087081-3|AAK66040.1|  240|Caenorhabditis elegans Hypothetical ...    29   3.6  
Z81030-13|CAB02705.2|  358|Caenorhabditis elegans Hypothetical p...    28   6.3  
Z74033-6|CAF31474.1|  321|Caenorhabditis elegans Hypothetical pr...    28   6.3  
U80023-11|AAG24044.1|  331|Caenorhabditis elegans Seven tm recep...    28   6.3  

>AF099922-1|AAK21410.2|  509|Caenorhabditis elegans Hypothetical
           protein F56F11.5 protein.
          Length = 509

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 17/67 (25%), Positives = 32/67 (47%)
 Frame = +1

Query: 232 NIFYINIKIMAQCKYRQDYLIMSIFNLRIKYLKKKQFVNIRKFYICQIRYSERVYLIEYI 411
           N F++N+ I  +  + +DY   S+    +   KK   + IRK   C +    +V L+E  
Sbjct: 70  NFFFLNLNIEIKTLFLEDYPSFSMVLAAVYCRKKALNIEIRKNMQCIVVKPNQVCLLEEC 129

Query: 412 QENMNNV 432
           Q  ++ +
Sbjct: 130 QHPLHTI 136


>AC006634-1|AAF39796.1|  231|Caenorhabditis elegans Hypothetical
           protein F35F11.3 protein.
          Length = 231

 Score = 31.1 bits (67), Expect = 0.68
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = -3

Query: 219 NNLIVYKRFTDLTEN*YFSLYFVLYLTDLLKVLYRYLIITNVVIF 85
           NNLIV+  F    ++     +FV+YL D   + +R+ I T  ++F
Sbjct: 158 NNLIVFIEFNKGEKSLLELTFFVIYLLDFFSMTHRHDIFTMALLF 202


>Z74033-5|CAF31473.1|  333|Caenorhabditis elegans Hypothetical
           protein F38B7.7 protein.
          Length = 333

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 241 YINIKIMAQCKYRQDYLIMSIFNLRIKYLKKKQF 342
           YI+   + QC +  D  IM +FN R+ +L++K F
Sbjct: 278 YISGTFVWQCLHSIDGFIMIMFNERLSFLRRKLF 311


>Z81047-3|CAB02829.1|  389|Caenorhabditis elegans Hypothetical
           protein C41G6.5 protein.
          Length = 389

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 14/41 (34%), Positives = 27/41 (65%), Gaps = 4/41 (9%)
 Frame = +1

Query: 346 NIRKFYICQIRYSER----VYLIEYIQENMNNVSLKLRMSD 456
           NI KFYI Q+RY++R    ++ I+  ++ M  V+ + +++D
Sbjct: 171 NILKFYINQVRYAKRKNTNIFTIKTTEDFMRLVNFQRKIAD 211


>AC087081-3|AAK66040.1|  240|Caenorhabditis elegans Hypothetical
           protein Y82E9BL.16 protein.
          Length = 240

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 316 IKYLKKKQFVNIRKFYICQIRYSERVYLIEY 408
           IK LK K+FV   K Y  Q R++E + ++ Y
Sbjct: 70  IKALKTKKFVCATKIYFYQFRFNEILSILPY 100


>Z81030-13|CAB02705.2|  358|Caenorhabditis elegans Hypothetical
           protein C01G10.3 protein.
          Length = 358

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 16/53 (30%), Positives = 29/53 (54%)
 Frame = +1

Query: 193 KTFINY*IVNLYMNIFYINIKIMAQCKYRQDYLIMSIFNLRIKYLKKKQFVNI 351
           K   N+ I  L   I+ +N K+M + ++     IM +FN R+  +K++  +NI
Sbjct: 286 KKLKNWKIKKLKFFIYILNAKLMEKIRF-----IMMMFNARLSPMKRRLKINI 333


>Z74033-6|CAF31474.1|  321|Caenorhabditis elegans Hypothetical
           protein F38B7.8 protein.
          Length = 321

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +1

Query: 241 YINIKIMAQCKYRQDYLIMSIFNLRIKYLKKKQF 342
           +I+   + QC +  D  IM +FN R+  LKKK F
Sbjct: 262 FISGTFVWQCLHSIDGFIMIMFNERLTLLKKKLF 295


>U80023-11|AAG24044.1|  331|Caenorhabditis elegans Seven tm receptor
           protein 47 protein.
          Length = 331

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = -3

Query: 285 ILPILALCHYFDIYVKYIHIQINNLI-VYKRFTDLTEN*YFSLYFVLYLTDLLKVLYRYL 109
           IL +LA     +    +I+  +N+ + V++ F  LT   Y S Y V+     ++ L+RYL
Sbjct: 57  ILELLARPFVHNYNKGWIYFSLNSWMNVHEGFLKLTMIFYSSFYIVMLSHISVQFLFRYL 116

Query: 108 IITN 97
           ++ +
Sbjct: 117 VLVS 120


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,673,615
Number of Sequences: 27780
Number of extensions: 220146
Number of successful extensions: 542
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 542
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)