Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0740
         (629 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   4.3  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   4.3  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    21   7.5  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 585 FDFS*KNVHPYQFYY 629
           F  S KN+ PY  YY
Sbjct: 132 FQLSLKNIEPYNNYY 146


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 585 FDFS*KNVHPYQFYY 629
           F  S KN+ PY  YY
Sbjct: 132 FQLSLKNIEPYNNYY 146


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 122 KTFNKSVKYKTKYSEKYQFS 181
           KT + +  YK  Y+ KY ++
Sbjct: 88  KTIHNNNNYKYNYNNKYNYN 107


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,866
Number of Sequences: 438
Number of extensions: 2745
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)