Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0739
         (613 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    26   0.22 
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    26   0.22 
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   3.5  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   4.7  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    21   6.2  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 26.2 bits (55), Expect = 0.22
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +1

Query: 7   GIRHEAQQHRSDFIFYLHYFNIKYLLDINYQPLKRAVSKSSS 132
           G + E +QH+SD+ FY  ++   Y L   Y   + A ++++S
Sbjct: 43  GRKGELKQHKSDY-FYFSFYITSYTLLSVYSLFRIATNENNS 83


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 26.2 bits (55), Expect = 0.22
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +1

Query: 7   GIRHEAQQHRSDFIFYLHYFNIKYLLDINYQPLKRAVSKSSS 132
           G + E +QH+SD+ FY  ++   Y L   Y   + A ++++S
Sbjct: 43  GRKGELKQHKSDY-FYFSFYITSYTLLSVYSLFRIATNENNS 83


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 230 FNFVTAKLENFYDNFI 277
           FNF T KLE F   F+
Sbjct: 72  FNFATKKLEQFIVRFM 87


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
          transcriptase andRNase H protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 2  LQEFGTRLNNTGRILYF 52
          LQEFG R  +TGR L +
Sbjct: 5  LQEFGKRGRSTGRGLKY 21


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/43 (20%), Positives = 17/43 (39%)
 Frame = +2

Query: 455 TVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAE 583
           T+S  CK        +  H+ V F +++   ++    G    E
Sbjct: 31  TISQGCKACGYHSPLESNHKLVTFILKNPPNLNPAVQGSSLTE 73


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,321
Number of Sequences: 336
Number of extensions: 2544
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)