Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0739
(613 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g59890.1 68418.m07510 actin-depolymerizing factor 4 (ADF4) id... 49 2e-06
At2g31200.1 68415.m03810 actin-depolymerizing factor 6 (ADF6) id... 49 2e-06
At3g46010.1 68416.m04978 actin-depolymerizing factor 1 (ADF1) id... 48 5e-06
At5g59880.2 68418.m07509 actin-depolymerizing factor 3 (ADF3) id... 46 3e-05
At5g59880.1 68418.m07508 actin-depolymerizing factor 3 (ADF3) id... 46 3e-05
At3g46000.1 68416.m04977 actin-depolymerizing factor, putative (... 44 8e-05
At5g59890.2 68418.m07511 actin-depolymerizing factor 4 (ADF4) id... 44 1e-04
At5g52360.1 68418.m06497 actin-depolymerizing factor, putative s... 44 1e-04
At1g01750.1 68414.m00094 actin-depolymerizing factor, putative s... 44 1e-04
At4g00680.1 68417.m00093 actin-depolymerizing factor, putative s... 43 1e-04
At2g16700.1 68415.m01916 actin-depolymerizing factor 5 (ADF5) id... 41 6e-04
At4g25590.1 68417.m03687 actin-depolymerizing factor, putative s... 39 0.002
At4g34970.1 68417.m04957 actin-depolymerizing factor, putative s... 37 0.009
At3g45990.1 68416.m04976 actin-depolymerizing factor, putative s... 37 0.012
At4g35250.1 68417.m05010 vestitone reductase-related low similar... 27 7.4
At2g33060.1 68415.m04054 leucine-rich repeat family protein cont... 27 9.8
>At5g59890.1 68418.m07510 actin-depolymerizing factor 4 (ADF4)
identical to SP|Q9ZSK3 Actin-depolymerizing factor 4
(ADF-4) (AtADF4) {Arabidopsis thaliana}
Length = 139
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +2
Query: 443 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDL 607
ASG+ V D CK + E+K + HR++V+ I + +KQ+ VE VGE YE F L
Sbjct: 5 ASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60
>At2g31200.1 68415.m03810 actin-depolymerizing factor 6 (ADF6)
identical to SP|Q9ZSK2 Actin-depolymerizing factor 6
(ADF-6) (AtADF6) {Arabidopsis thaliana}
Length = 146
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +2
Query: 446 SGVTVSDACKTTYEEIKKDKKHRYVVFYI-RDEKQIDVETVGERNAEYEQFLEDL 607
SG+ V+D KTT+ E+++ K HRYVVF I +K++ VE G Y+ FL L
Sbjct: 13 SGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASL 67
>At3g46010.1 68416.m04978 actin-depolymerizing factor 1 (ADF1)
identical to SP|Q39250 Actin-depolymerizing factor 1
(ADF-1) (AtADF1) {Arabidopsis thaliana}
Length = 139
Score = 48.0 bits (109), Expect = 5e-06
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +2
Query: 443 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQF 595
ASG+ V D CK + E+K + HR++V+ I + +KQ+ VE VG+ YE+F
Sbjct: 5 ASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEF 56
>At5g59880.2 68418.m07509 actin-depolymerizing factor 3 (ADF3)
identical to SP|Q9ZSK4 Actin-depolymerizing factor 3
(ADF 3) (AtADF3) {Arabidopsis thaliana}
Length = 124
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +2
Query: 443 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDL 607
ASG+ V D CK + E+K + HR++++ I + +KQ+ VE +GE +E L
Sbjct: 5 ASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASL 60
>At5g59880.1 68418.m07508 actin-depolymerizing factor 3 (ADF3)
identical to SP|Q9ZSK4 Actin-depolymerizing factor 3
(ADF 3) (AtADF3) {Arabidopsis thaliana}
Length = 139
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +2
Query: 443 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDL 607
ASG+ V D CK + E+K + HR++++ I + +KQ+ VE +GE +E L
Sbjct: 5 ASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASL 60
>At3g46000.1 68416.m04977 actin-depolymerizing factor, putative
(ADF2) strong similarity to SP|Q9ZSK3
Actin-depolymerizing factor 4 (ADF-4) (AtADF4)
{Arabidopsis thaliana}; contains Pfam profile PF00241:
Cofilin/tropomyosin-type actin-binding protein
Length = 137
Score = 44.0 bits (99), Expect = 8e-05
Identities = 22/55 (40%), Positives = 31/55 (56%)
Frame = +2
Query: 443 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDL 607
ASG+ V D CK + E+K + R +V+ I D KQ+ VE +GE Y+ F L
Sbjct: 5 ASGMAVHDDCKLKFMELKAKRTFRTIVYKIED-KQVIVEKLGEPEQSYDDFAASL 58
>At5g59890.2 68418.m07511 actin-depolymerizing factor 4 (ADF4)
identical to SP|Q9ZSK3 Actin-depolymerizing factor 4
(ADF-4) (AtADF4) {Arabidopsis thaliana}
Length = 132
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 452 VTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDL 607
+ V D CK + E+K + HR++V+ I + +KQ+ VE VGE YE F L
Sbjct: 1 MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 53
>At5g52360.1 68418.m06497 actin-depolymerizing factor, putative
strong similarity to pollen specific
actin-depolymerizing factor 2 [Nicotiana tabacum]
GI:22857914; contains Pfam profile PF00241:
Cofilin/tropomyosin-type actin-binding protein
Length = 137
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +2
Query: 443 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQF 595
ASG+ V D CK + E+K + +R+++F I D +Q+ VE +G Y+ F
Sbjct: 5 ASGMAVEDECKLKFLELKAKRNYRFIIFRI-DGQQVVVEKLGSPQENYDDF 54
>At1g01750.1 68414.m00094 actin-depolymerizing factor, putative
strong similarity to SP|P30175 Actin-depolymerizing
factor (ADF) {Lilium longiflorum}; contains Pfam profile
PF00241: Cofilin/tropomyosin-type actin-binding protein
Length = 140
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +2
Query: 443 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEK--QIDVETVGERNAEYEQFLEDL 607
ASG+ VSD CK + E+K + +R++VF I DEK Q+ ++ +G YE F +
Sbjct: 5 ASGMHVSDECKLKFLELKAKRNYRFIVFKI-DEKAQQVMIDKLGNPEETYEDFTRSI 60
>At4g00680.1 68417.m00093 actin-depolymerizing factor, putative
strong similarity to SP|P30175 Actin-depolymerizing
factor (ADF) {Lilium longiflorum}; contains Pfam profile
PF00241: Cofilin/tropomyosin-type actin-binding protein
Length = 140
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +2
Query: 443 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEK--QIDVETVGERNAEYEQFLEDL 607
ASG+ V+D CK + E+K + +R++VF I DEK Q+ +E +G Y+ F +
Sbjct: 5 ASGMHVNDECKIKFLELKAKRTYRFIVFKI-DEKAQQVQIEKLGNPEETYDDFTSSI 60
>At2g16700.1 68415.m01916 actin-depolymerizing factor 5 (ADF5)
identical to SP|Q9ZNT3 Actin-depolymerizing factor 5
(ADF-5) (AtADF5) {Arabidopsis thaliana}
Length = 143
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/58 (37%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Frame = +2
Query: 437 KMAS-GVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLED 604
KMA+ G+ V+D C +++ ++K K HRY+VF I ++ +++ V+ VG Y LED
Sbjct: 6 KMATTGMRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHD-LED 62
>At4g25590.1 68417.m03687 actin-depolymerizing factor, putative
strong similarity to pollen specific
actin-depolymerizing factor 2 [Nicotiana tabacum]
GI:22857914; contains Pfam profile PF00241:
Cofilin/tropomyosin-type actin-binding protein
Length = 130
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +2
Query: 452 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDL 607
+ V D CK + E+K + +R+++F I D +Q+ VE +G + Y+ F L
Sbjct: 1 MAVEDECKLKFLELKSKRNYRFIIFRI-DGQQVVVEKLGNPDETYDDFTASL 51
>At4g34970.1 68417.m04957 actin-depolymerizing factor, putative
similar to SP|Q9ZNT3 Actin-depolymerizing factor 5
(ADF-5) (AtADF5) {Arabidopsis thaliana}; contains Pfam
profile PF00241: Cofilin/tropomyosin-type actin-binding
protein
Length = 130
Score = 37.1 bits (82), Expect = 0.009
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +2
Query: 458 VSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDL 607
++D CK ++ E+K K HRYVV+ + ++ +++ V+ VG Y+ L
Sbjct: 1 MTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAASL 51
>At3g45990.1 68416.m04976 actin-depolymerizing factor, putative
similar to SP|Q9ZSK3 Actin-depolymerizing factor 4
(ADF-4) (AtADF4) {Arabidopsis thaliana}; contains Pfam
profile PF00241: Cofilin/tropomyosin-type actin-binding
protein
Length = 133
Score = 36.7 bits (81), Expect = 0.012
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Frame = +2
Query: 452 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVE------TVGERNAEYEQFLEDL 607
+ + D CK T+ E+K+ + R +V+ I D Q+ VE GER YE+F L
Sbjct: 1 MVLHDDCKLTFLELKERRTFRSIVYKIEDNMQVIVEKHHYKKMHGEREQSYEEFANSL 58
>At4g35250.1 68417.m05010 vestitone reductase-related low similarity
to vestitone reductase [Medicago sativa subsp. sativa]
GI:973249
Length = 395
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +2
Query: 263 YDNFIIKDTVLTSPITLTHALIGCRQKGLTNI 358
+ + DTV ++P+T T++L+G QK + +
Sbjct: 335 FSEVLSSDTVFSAPMTETNSLLGVDQKDMVTL 366
>At2g33060.1 68415.m04054 leucine-rich repeat family protein
contains leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Hcr2-0B
[Lycopersicon esculentum] gi|3894387|gb|AAC78593
Length = 808
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +1
Query: 79 LLDINYQPLKRAVSKSSSDYCYVVVLINLRDNKFD 183
+LD++Y L + + SD+ ++++NLR N +
Sbjct: 413 ILDLSYNNLTGPIPRCLSDFQESLIVVNLRKNNLE 447
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,263,035
Number of Sequences: 28952
Number of extensions: 203629
Number of successful extensions: 481
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 476
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1226538000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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