Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0736
(568 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 199 2e-52
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 191 5e-50
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 179 3e-46
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 165 5e-42
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 141 6e-35
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 140 2e-34
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 125 4e-30
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 117 1e-27
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 107 8e-25
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 85 5e-18
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 83 3e-17
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 78 1e-15
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 77 1e-15
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 75 1e-14
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 73 2e-14
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 63 3e-11
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 61 1e-10
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 58 1e-09
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 46 5e-06
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 45 7e-06
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 44 1e-05
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 41 1e-04
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 30 0.21
SPBC2D10.13 |est1||telomerase regulator Est1|Schizosaccharomyces... 30 0.27
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 26 3.4
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 5.9
SPAC343.15 |||tRNA isopentenyltransferase|Schizosaccharomyces po... 25 7.7
SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces pomb... 25 7.7
SPAC9.11 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Ma... 25 7.7
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 199 bits (486), Expect = 2e-52
Identities = 90/181 (49%), Positives = 131/181 (72%)
Frame = +1
Query: 10 KYIIIGDTGVGKSCLLLQFTDKRFRPVHDLTIGVEFGARMITIDGKQIKLQIWDTGGQEA 189
K ++IGD+GVGKSCLLL+F++ F P TIG++F R I +DGK+IKLQIWDT GQE
Sbjct: 11 KLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 70
Query: 190 FRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRR 369
FR+IT +YYRGA G LL+YD+T +++F+++ TW + QH++ N+ +LIGNK D E +R
Sbjct: 71 FRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQR 130
Query: 370 EVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKI 549
+V E+G+A A E G+ F+E SAKT NV+EAF A+EI ++ + + +N+AN + +
Sbjct: 131 QVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREIKKQKIDAENEFSNQANNVDL 190
Query: 550 G 552
G
Sbjct: 191 G 191
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 191 bits (466), Expect = 5e-50
Identities = 90/162 (55%), Positives = 120/162 (74%)
Frame = +1
Query: 7 FKYIIIGDTGVGKSCLLLQFTDKRFRPVHDLTIGVEFGARMITIDGKQIKLQIWDTGGQE 186
FK ++IGD+GVGKS LL++FT F TIGVEF R I +D K+IK QIWDT GQE
Sbjct: 11 FKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQE 70
Query: 187 AFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESR 366
+R+IT +YYRGA GAL+VYDIT++ +F+++ WL++ R+H++SN+VIML+GNK+DL
Sbjct: 71 RYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHL 130
Query: 367 REVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIY 492
R V EE +AFA E+ L F+ETSA A+NVEEAF EI+
Sbjct: 131 RAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIF 172
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 179 bits (435), Expect = 3e-46
Identities = 79/182 (43%), Positives = 125/182 (68%)
Frame = +1
Query: 7 FKYIIIGDTGVGKSCLLLQFTDKRFRPVHDLTIGVEFGARMITIDGKQIKLQIWDTGGQE 186
FK ++IGD+GVGKSCLLL+F D + + TIGV+F R ++GK +KLQIWDT GQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQE 68
Query: 187 AFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESR 366
FR+IT SYYRGA G ++VYD+T +++FN++ WL++ +++ + +L+GNKSD+ +
Sbjct: 69 RFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDK 128
Query: 367 REVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIK 546
+ V+ + FA + F+ETSAK + NVE+AF+ +++I E++ F +N + +K
Sbjct: 129 KVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERMGNNTFASSNAKSSVK 188
Query: 547 IG 552
+G
Sbjct: 189 VG 190
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 165 bits (400), Expect = 5e-42
Identities = 80/186 (43%), Positives = 122/186 (65%), Gaps = 5/186 (2%)
Frame = +1
Query: 10 KYIIIGDTGVGKSCLLLQFTDKRFRPVHDLTIGVEFGARMITI----DGKQIKLQIWDTG 177
K ++ G +G GKSCLL +F ++ T+G++F +R+I++ K+IKLQIWDT
Sbjct: 11 KIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTA 70
Query: 178 GQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDL 357
GQE FRS+ R+YYRGAAGA+LVYD+T +++F L++WL D R + S + ++L G+KSDL
Sbjct: 71 GQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVLAGSKSDL 130
Query: 358 ESRREVKKEEGEAFARE-HGLVFMETSAKTAANVEEAFINTAKEIYEKIQEGVFDINNEA 534
+++R+V EE F E H ETS+ T +NVEE F++ I +I+ G D +++
Sbjct: 131 QNQRQVSTEEAAEFCSEKHISSAHETSSYTGSNVEECFLSVVSTIITRIELGEIDPQDQS 190
Query: 535 NGIKIG 552
GI+ G
Sbjct: 191 LGIQYG 196
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 141 bits (342), Expect = 6e-35
Identities = 63/160 (39%), Positives = 105/160 (65%)
Frame = +1
Query: 4 RFKYIIIGDTGVGKSCLLLQFTDKRFRPVHDLTIGVEFGARMITIDGKQIKLQIWDTGGQ 183
+FK + +G+ VGK+ L+ +F +F + TIG++F ++ + ++ + ++LQ+WDT GQ
Sbjct: 11 KFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 70
Query: 184 EAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLES 363
E FRS+ SY R ++ A++VYDIT +F + W+ED R +++I+L+GNK+DL
Sbjct: 71 ERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLAD 130
Query: 364 RREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAK 483
+R+V +EEGE A+E ++ METSAK NV+ F A+
Sbjct: 131 KRQVTQEEGEKKAKELKIMHMETSAKAGHNVKLLFRKIAQ 170
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 140 bits (338), Expect = 2e-34
Identities = 72/180 (40%), Positives = 110/180 (61%), Gaps = 4/180 (2%)
Frame = +1
Query: 10 KYIIIGDTGVGKSCLLLQFTDKRFRPVHDLTIGVEFGARMITID-GKQIKLQIWDTGGQE 186
K +++GD+ VGKS L+L+F +F + TIG F + + ID +KL+IWDT GQE
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 187 AFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDL-ES 363
++S+ YYR A A++VYDIT+ + +W+++ ++ + +VI L GNK DL +
Sbjct: 76 RYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQE 135
Query: 364 RREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKE--IYEKIQEGVFDINNEAN 537
RR V+K + EA+A E L+F ETSAKTA NV E F AK+ + +K+ + +N N
Sbjct: 136 RRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKLPLEDKLNQARGAVNRGVN 195
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 125 bits (302), Expect = 4e-30
Identities = 67/170 (39%), Positives = 105/170 (61%), Gaps = 6/170 (3%)
Frame = +1
Query: 10 KYIIIGDTGVGKSCLLLQFTDKRFRPVHDLTIGVEFGARMITIDGKQIKLQIWDTGGQEA 189
K II+G++GVGK+ ++ Q+ +++F + TIG +F + + +D K + LQ+WDT GQE
Sbjct: 10 KVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQER 69
Query: 190 FRSITRSYYRGAAGALLVYDITRRETFNHLTTWLED-ARQHSNSN---MVIMLIGNKSDL 357
F+S+ ++YRGA +LVYD+ ++F L +W ++ Q S SN +L+GNK D+
Sbjct: 70 FQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKVDV 129
Query: 358 -ESRREVKKEEGEAFAREHG-LVFMETSAKTAANVEEAFINTAKEIYEKI 501
E +R V K + AF + G + + ETSAK A NV+EAF AK E +
Sbjct: 130 EEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAKLALENM 179
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 117 bits (282), Expect = 1e-27
Identities = 66/179 (36%), Positives = 99/179 (55%), Gaps = 3/179 (1%)
Frame = +1
Query: 7 FKYIIIGDTGVGKSCLLLQFTDKRFRPVHDLTIGVEFGARMITIDGKQIKLQIWDTGGQE 186
+K +++GD GVGKS L +Q F +D TI + + IDG+ L + DT GQE
Sbjct: 9 YKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSY-RKKCEIDGEGALLDVLDTAGQE 67
Query: 187 AFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDA-RQHSNSNMVIMLIGNKSDLES 363
+ ++ Y R G LLVY+IT R +F+ ++T+ + R ++L+ NK DLE+
Sbjct: 68 EYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDLEA 127
Query: 364 RREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEI--YEKIQEGVFDINNEA 534
R V + EGE A+ +++ETSAK NVEEAF + + I Y K +E F N +A
Sbjct: 128 ERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLVRTIRRYNKSEEKGFQ-NKQA 185
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 107 bits (258), Expect = 8e-25
Identities = 52/160 (32%), Positives = 96/160 (60%), Gaps = 7/160 (4%)
Frame = +1
Query: 10 KYIIIGDTGVGKSCLLLQFTDKRFRPVHDLTIGVEFGARMITIDGKQIKLQIWDTGGQEA 189
K +I+GD+GVGK+CL+ QF +++F + TIG +F + + +D K + LQ+WDT GQE
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 190 FRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSN---MVIMLIGNKSDLE 360
F+S+ ++YRGA ++VY++ ++F+ + W ++ ++ + +++GN+ D +
Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQIDKD 129
Query: 361 -SRREVKKEEGEAFAR-EHG--LVFMETSAKTAANVEEAF 468
S+R V + + +HG ++ E SAK NV + F
Sbjct: 130 ASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLF 169
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 85.4 bits (202), Expect = 5e-18
Identities = 52/158 (32%), Positives = 81/158 (51%), Gaps = 1/158 (0%)
Frame = +1
Query: 19 IIGDTGVGKSCLLLQFTDKRFRPVHDLTIGVEFGARMITIDGKQIKLQIWDTGGQEAFRS 198
++G VGKS L +Q+ + F + TI F ++ I G++ +I DT GQ+ +
Sbjct: 11 VLGSRSVGKSSLTVQYVENHFVESYYPTIENTF-SKNIKYKGQEFATEIIDTAGQDEYSI 69
Query: 199 ITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMV-IMLIGNKSDLESRREV 375
+ + G G +LVY IT + +F + + H+ + V I+++GNKSDL +R V
Sbjct: 70 LNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLHMQRAV 129
Query: 376 KKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEI 489
EEG+A A E + E SA+ NV AF EI
Sbjct: 130 TAEEGKALANEWKCAWTEASARHNENVARAFELIISEI 167
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 83.0 bits (196), Expect = 3e-17
Identities = 46/161 (28%), Positives = 82/161 (50%)
Frame = +1
Query: 7 FKYIIIGDTGVGKSCLLLQFTDKRFRPVHDLTIGVEFGARMITIDGKQIKLQIWDTGGQE 186
FK +++GD G GK+ + + F + T+GVE + +I +WDT GQE
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQE 69
Query: 187 AFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESR 366
+ YY ++++D+T R T+ ++ W D + N+ I+L GNK D++ R
Sbjct: 70 KLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVRVC-ENIPIVLCGNKVDVKER 128
Query: 367 REVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEI 489
+ K + F R+ L + + SAK+ N E+ F+ A+++
Sbjct: 129 K--VKAKAITFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 167
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 77.8 bits (183), Expect = 1e-15
Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 7/166 (4%)
Frame = +1
Query: 19 IIGDTGVGKSCLLLQFTDKRFRPVHDLTIGVEFGARMITIDGKQIKLQIWDTGGQEAFRS 198
+IGD+ +GK+ L++ + F T+GV F + I+I +I IWD GGQ F +
Sbjct: 15 MIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVN 74
Query: 199 ITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSD------LE 360
+ A L ++D++R+ T N + W AR N V +LIG K D E
Sbjct: 75 MLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGF-NKTAVPILIGTKYDHFMTFPRE 133
Query: 361 SRREVKKEEGE-AFAREHGLVFMETSAKTAANVEEAFINTAKEIYE 495
+ E+ K+ A A + LVF TS + NV++ F ++++
Sbjct: 134 DQEEITKQARRYAKAMKASLVFCSTS--HSINVQKIFKIVLAKVFD 177
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 77.4 bits (182), Expect = 1e-15
Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 14/174 (8%)
Frame = +1
Query: 4 RFKYIIIGDTGVGKSCLLLQFTDKRFRPVHDLTIGVEFGARMITIDGKQIKLQIWDTGGQ 183
R K +I+GD GK+CLL+ F+ F V+ T+ + A + +DG+ I+L +WDT GQ
Sbjct: 6 RRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVAD-VEVDGRHIELALWDTAGQ 64
Query: 184 EAFRSITRSYYRGAAGALLVYDITRRETFNHL-TTWLEDARQHSNSNMVIMLIGNKSDLE 360
E + + Y + L+ + + E+ +++ W+ + H SN+ I+L+G K DL
Sbjct: 65 EDYDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEV-LHFCSNLPILLVGCKVDLR 123
Query: 361 ------------SRREVKKEEGEAFAREHGLV-FMETSAKTAANVEEAFINTAK 483
S++ + EEG+ A++ G ++E SAK V E F A+
Sbjct: 124 NDPKTIEELSKTSQKPITFEEGQVVAQKIGAYKYLECSAKLNEGVNEVFETAAR 177
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 74.5 bits (175), Expect = 1e-14
Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 10/187 (5%)
Frame = +1
Query: 10 KYIIIGDTGVGKSCLLLQFTDKRFRPVHDLTIGVEFGARMITIDGKQIKLQIWDTGGQEA 189
K +I+GD GK+ LL FT F V++ TI + I +DG I+L +WDT GQE
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENY-IHDIFVDGNSIELSLWDTAGQEE 73
Query: 190 FRSITRSYYRGAAGALLVYDITRRETF-NHLTTWLEDARQHSNSNMVIMLIGNKSDLESR 366
+ + Y ++ + + R++ N +T WL + + + ++L+ K DL
Sbjct: 74 YDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNC-PGVKLVLVALKCDLRGA 132
Query: 367 RE--------VKKEEGEAFAREHGLV-FMETSAKTAANVEEAFINTAKEIYEKIQEGVFD 519
E + EEG A A++ V ++E SAK V EAF A+ G D
Sbjct: 133 DEEQVDHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEAARVALAAQPRGTKD 192
Query: 520 INNEANG 540
+E++G
Sbjct: 193 GADESHG 199
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 73.3 bits (172), Expect = 2e-14
Identities = 49/169 (28%), Positives = 88/169 (52%), Gaps = 14/169 (8%)
Frame = +1
Query: 4 RFKYIIIGDTGVGKSCLLLQFTDKRFRPVHDLTIGVEFGARMITIDGKQIKLQIWDTGGQ 183
R K +I+GD GK+CLL+ F+ F V+ T+ + A + +DG+ ++L +WDT GQ
Sbjct: 6 RRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVAD-VEVDGRHVELALWDTAGQ 64
Query: 184 EAFRSITRSYYRGAAGALLVYDITRRETFNHL-TTWLEDARQHSNSNMVIMLIGNKSDLE 360
E + + Y + L+ + + ++ +++ W+ + H S++ I+L+ K+DL
Sbjct: 65 EDYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEV-LHFCSSLPILLVACKADLR 123
Query: 361 ------------SRREVKKEEGEAFAREHGLV-FMETSAKTAANVEEAF 468
++ V EEG+A A++ G ++E SAKT V E F
Sbjct: 124 NDPKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVREVF 172
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 62.9 bits (146), Expect = 3e-11
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 14/169 (8%)
Frame = +1
Query: 4 RFKYIIIGDTGVGKSCLLLQFTDKRFRPVHDLTIGVEFGARMITIDGKQIKLQIWDTGGQ 183
R K +++GD GK+ LL FT F P + E +DGK ++L +WDT GQ
Sbjct: 8 RRKLVVVGDGACGKTSLLSVFTLGYF-PTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQ 66
Query: 184 EAFRSITRSYYRGAAGALLVYDITRRETFNHLTT-WLEDARQHSNSNMVIMLIGNKSDL- 357
E + + Y A L+ + I ++ +++T W+E+ N+ +L+G K+DL
Sbjct: 67 EEYERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLC-PNVPFILVGMKADLR 125
Query: 358 -------ESRRE----VKKEEGEAFAREHGL-VFMETSAKTAANVEEAF 468
E RR VK ++ E A+ G +ME S+ T V++ F
Sbjct: 126 SDPVAIEEMRRRNQNFVKSQQAELVAQRIGARKYMECSSLTGDGVDDVF 174
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 60.9 bits (141), Expect = 1e-10
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Frame = +1
Query: 10 KYIIIGDTGVGKSCLLLQFTDKRFRPVHDLTIGVEFGARMITI--DGKQIKLQIWDTGGQ 183
K +++GD G GK+CLL+ F+ F + T+ + IT + K I+L +WDT GQ
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENY-ITDITYGPNSKVIELALWDTAGQ 74
Query: 184 EAFRSITRSYYRGAAGALLVYDITRRETFNHLT-TWLEDARQHSNSNMVIMLIGNKSDLE 360
E + + Y + LL + I + N++T W + QH I+L+G K+DL
Sbjct: 75 EEYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEV-QHFCPRTPIVLVGLKADLR 133
Query: 361 SRR---EVKKEEG---------EAFAREHGLVFMETSAKTAANVEEAF 468
R EV + +G ++ A ++E SAK V E F
Sbjct: 134 KDRNATEVLRTQGLTPVTYQQAQSVALSMNAPYVECSAKENTGVNEVF 181
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 57.6 bits (133), Expect = 1e-09
Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 14/167 (8%)
Frame = +1
Query: 10 KYIIIGDTGVGKSCLLLQFTDKRFRPVHDLTIGVEFGARMITIDGKQIKLQIWDTGGQEA 189
K +++GD VGK+CLL+ +T +F + T+ + A + I + L ++DT GQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNY-AVTVMIGDEPYTLGLFDTAGQED 63
Query: 190 FRSITRSYYRGAAGALLVYDITRRETFNHL-TTWLEDARQHSNSNMVIMLIGNKSDLESR 366
+ + Y L+ + +T +F ++ W + H + +++G + DL
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHC-PGVPCLIVGTQIDLRDD 122
Query: 367 REVKK------------EEGEAFAREHGLV-FMETSAKTAANVEEAF 468
V++ E+GE ARE G V ++E SA T ++ F
Sbjct: 123 PSVQQKLARQHQHPLTHEQGERLARELGAVKYVECSALTQKGLKNVF 169
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 45.6 bits (103), Expect = 5e-06
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 8/143 (5%)
Frame = +1
Query: 115 FGARMITIDGKQIKLQIWDTGGQEAFRSITRSYYRGAAGALLVY----DITRRETFNHLT 282
FG ++ T++ + ++ IWD GGQ+ R+ ++Y+ + V D+ E N L
Sbjct: 48 FGFQIRTLEVEGLRFTIWDIGGQKTLRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQ 107
Query: 283 TWLEDARQHSNSNMVIMLIGNKSDLE---SRREVKKEEG-EAFAREHGLVFMETSAKTAA 450
L + + S I+++ NKSD+ S E+ K + H +F SA T
Sbjct: 108 ELLVEEKLLFTS---ILVLANKSDVSGALSSEEISKILNISKYKSSHWRIF-SVSALTGL 163
Query: 451 NVEEAFINTAKEIYEKIQEGVFD 519
N+++A A ++ E I+ G D
Sbjct: 164 NIKDAISWLANDLKE-IKLGTID 185
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 45.2 bits (102), Expect = 7e-06
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +1
Query: 118 GARMITIDGKQIKLQIWDTGGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLED 297
G + T++ + I +WD GGQ+ R + R Y++ G + V D RE + L+
Sbjct: 50 GFNVETVEYRNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERISEAHEELQR 109
Query: 298 ARQHSNSNMVIMLI-GNKSDL 357
++L+ NK DL
Sbjct: 110 MLNEDELRDALLLVFANKQDL 130
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 44.4 bits (100), Expect = 1e-05
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +1
Query: 118 GARMITIDGKQIKLQIWDTGGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLED 297
G + T+ K IK +WD GGQ+ R + R Y+ G G + V D + L
Sbjct: 54 GFNVETVTYKNIKFNVWDVGGQDKIRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHR 113
Query: 298 -ARQHSNSNMVIMLIGNKSDL 357
+ +++++ NK DL
Sbjct: 114 IISDREMRDCLLLVLANKQDL 134
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 40.7 bits (91), Expect = 1e-04
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 11/146 (7%)
Frame = +1
Query: 4 RFKYIIIGDTGVGKSCLL-LQFTDKRFRPVHDLTIGVEFGARMITIDGKQIKLQIWDTGG 180
R K +++G +G GKS + + F++ + L ++ + G + L +WD GG
Sbjct: 2 RKKVLLMGRSGSGKSSMRSIVFSNYVAKDTRRLGATIDIEHSHVRFLGNLV-LNLWDCGG 60
Query: 181 QEAFR----SITRSY-YRGAAGALLVYDITRRETFNHLTTW---LEDARQHSNSNMVIML 336
QEAF S R + +R + V+D+ RE L T+ LE +S V L
Sbjct: 61 QEAFMENYLSAQRDHIFRNVQVLIYVFDVESREFERDLVTFRNCLEATVANSPQARVFCL 120
Query: 337 IGNKSDL--ESRREVKKEEGEAFARE 408
I +K DL E R++ EE +A E
Sbjct: 121 I-HKMDLVQEDLRDLVFEERKAILLE 145
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 30.3 bits (65), Expect = 0.21
Identities = 42/184 (22%), Positives = 74/184 (40%), Gaps = 14/184 (7%)
Frame = +1
Query: 28 DTGVGKSCLLL--QFTDKRFRPVHDLTIGVEFGARMITIDGKQIKLQIWDT------GGQ 183
D + LLL Q D+ + V +LT+ + G ++ + K ++WD+ Q
Sbjct: 440 DISMQNEALLLRKQENDRLVKQVEELTVALNSGKMNAIVEAESSKNELWDSMMVSRMKTQ 499
Query: 184 EAFRSITRSYYR------GAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGN 345
E +TR Y + L+ + RE + L ++E+ Q ++ +
Sbjct: 500 EQSIELTRLYKQLQDIEEDYENKLMRMEQQWREDVDQLQEYVEEITQELQDTKEVLSKSS 559
Query: 346 KSDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIYEKIQEGVFDIN 525
K + V K EA RE +E KT EE+ I+ KE EK+ + + ++
Sbjct: 560 KESDDYEEVVGKLRTEA-ERE-----IEKFEKTIRENEES-ISLFKEEVEKLTDEITQLS 612
Query: 526 NEAN 537
N
Sbjct: 613 ERYN 616
>SPBC2D10.13 |est1||telomerase regulator Est1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 490
Score = 29.9 bits (64), Expect = 0.27
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = -2
Query: 237 QSASRAPVVRSGDGPKSFLTTCVPNLQLDLLAINCDHPSTKFNTNSEIMHRSESF 73
Q+ + A V S P S+LT+C+P++++ L + P+ F +E+ S F
Sbjct: 358 QTLACAKEVESERAPTSYLTSCLPSIKVILARVLESSPAFGFIERNELEQLSYHF 412
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 26.2 bits (55), Expect = 3.4
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +1
Query: 304 QHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLVFMETSAK 441
QH N ++V L+G+K L SR + +E +++M + K
Sbjct: 738 QHVNRDLVRNLLGSKGLLRSRCVILSTNSLTVLKEASMIYMLRNGK 783
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.4 bits (53), Expect = 5.9
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +1
Query: 16 IIIGDTGVGKSCLL 57
I++GDT GK+C+L
Sbjct: 1873 ILVGDTATGKTCIL 1886
>SPAC343.15 |||tRNA isopentenyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 434
Score = 25.0 bits (52), Expect = 7.7
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 16 IIIGDTGVGKSCLLLQFTDKRF 81
++IG TG GKS L +Q KRF
Sbjct: 7 VVIGTTGAGKSDLAVQLA-KRF 27
>SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 814
Score = 25.0 bits (52), Expect = 7.7
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +1
Query: 271 NHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEE 387
++ TWL ++ N+N+ + + S L+ + ++KK E
Sbjct: 386 DNTVTWLATWHENINNNVKYVFLAAGSSLKGQSDLKKYE 424
>SPAC9.11 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 328
Score = 25.0 bits (52), Expect = 7.7
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 430 TSAKTAANVEEAFINTAKEIYEKIQEGVFDINNEANG 540
T K + E + A I K+ E + ++NNE+NG
Sbjct: 38 TPTKVIDDQREILLQKASRI-SKLDEALCELNNESNG 73
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,165,943
Number of Sequences: 5004
Number of extensions: 41619
Number of successful extensions: 172
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 156
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 240047038
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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