Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0735
         (602 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0992 + 25083397-25083537,25084198-25084228,25084971-250851...    46   2e-05
06_01_0579 + 4099039-4099086,4099798-4099848,4100151-4100286,410...    44   7e-05
12_02_0498 + 19721038-19721178,19721376-19721472,19721576-197216...    35   0.057
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713...    35   0.057
03_02_0828 - 11592080-11592171,11592288-11592354,11592748-115928...    33   0.23 
10_08_0547 - 18682357-18682683,18682971-18683060,18683279-186833...    30   0.45 
02_05_0094 - 25758213-25758479,25758886-25758975,25759090-257591...    30   1.6  
06_01_0816 - 6171189-6171255,6171277-6171441,6172037-6172618,617...    29   2.1  
03_02_0490 - 8840577-8840914,8841009-8841067,8841168-8841283,884...    29   2.8  
12_02_0735 - 22636835-22639502,22639755-22640734                       29   3.7  
02_03_0113 - 15381289-15381556,15381633-15381985,15382184-153822...    29   3.7  
12_02_0474 + 19482150-19482152,19482205-19482336,19482513-194826...    27   8.7  
04_04_0611 - 26594737-26594991,26595307-26595396,26595490-265955...    27   8.7  
03_05_0434 + 24252994-24253449,24254791-24254877,24255450-242557...    27   8.7  

>12_02_0992 +
           25083397-25083537,25084198-25084228,25084971-25085139,
           25085228-25085291,25085408-25085474,25086543-25086586,
           25086835-25086922,25087079-25087238,25087659-25087779,
           25087859-25087942,25088043-25088162,25088689-25088901,
           25088995-25089054,25089144-25089262,25089407-25089465,
           25089585-25089919
          Length = 624

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 22/65 (33%), Positives = 29/65 (44%)
 Frame = +3

Query: 384 CEECNKIIGIDSKDLSYKDKHWHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCYDAQFAS 563
           C  C   IG   + LS  D  WH  CF C  C   + + +F    D+ Y  +CY   F  
Sbjct: 257 CAGCKNPIG-HGRFLSCMDSVWHPQCFRCFACNKPISEYEFAMHEDQPYHKSCYKDFFHP 315

Query: 564 RCDGC 578
           +CD C
Sbjct: 316 KCDVC 320



 Score = 44.8 bits (101), Expect = 5e-05
 Identities = 15/58 (25%), Positives = 28/58 (48%)
 Frame = +3

Query: 234 GEYTKAMNKDWHSGHFCCWQCDESLTGQRYVLRDEHPYCIKCYESVFANGCEECNKII 407
           G +   M+  WH   F C+ C++ ++   + + ++ PY   CY+  F   C+ C   I
Sbjct: 267 GRFLSCMDSVWHPQCFRCFACNKPISEYEFAMHEDQPYHKSCYKDFFHPKCDVCKNFI 324


>06_01_0579 +
           4099039-4099086,4099798-4099848,4100151-4100286,
           4100287-4100401,4100496-4100528,4101037-4101166,
           4101663-4101751,4102042-4102148,4102238-4102309,
           4102384-4102764,4104907-4105064,4105581-4105674,
           4106082-4106089,4106297-4106387,4107136-4107289,
           4108257-4108377,4108468-4108551,4108946-4109065,
           4109181-4109393,4109482-4109544,4109668-4109783,
           4110132-4110190,4111126-4111445
          Length = 920

 Score = 44.4 bits (100), Expect = 7e-05
 Identities = 21/65 (32%), Positives = 28/65 (43%)
 Frame = +3

Query: 384 CEECNKIIGIDSKDLSYKDKHWHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCYDAQFAS 563
           C  C+  IG   + LS     WH  CF C  C   + D +F    +  Y   CY  +F  
Sbjct: 558 CAGCHSEIG-HGRFLSCMGAVWHPECFRCHACNQPIYDYEFSMSGNHPYHKTCYKERFHP 616

Query: 564 RCDGC 578
           +CD C
Sbjct: 617 KCDVC 621



 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 16/58 (27%), Positives = 25/58 (43%)
 Frame = +3

Query: 234 GEYTKAMNKDWHSGHFCCWQCDESLTGQRYVLRDEHPYCIKCYESVFANGCEECNKII 407
           G +   M   WH   F C  C++ +    + +   HPY   CY+  F   C+ C + I
Sbjct: 568 GRFLSCMGAVWHPECFRCHACNQPIYDYEFSMSGNHPYHKTCYKERFHPKCDVCKQFI 625


>12_02_0498 +
           19721038-19721178,19721376-19721472,19721576-19721619,
           19722120-19722203,19722441-19722662
          Length = 195

 Score = 34.7 bits (76), Expect = 0.057
 Identities = 17/58 (29%), Positives = 30/58 (51%)
 Frame = +3

Query: 384 CEECNKIIGIDSKDLSYKDKHWHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCYDAQF 557
           C  C+K + +  K L+  ++ +H+ACF C  C+ +L    + S    +YC   +D  F
Sbjct: 12  CMACDKTVYLVDK-LTADNRVYHKACFRCHHCKGTLKLANYNSFEGVLYCRPHFDQLF 68


>06_01_0926 -
           7139220-7139318,7139394-7139478,7139573-7139643,
           7139996-7140076,7140805-7140895,7141242-7141330,
           7141749-7141802,7141906-7142085,7142175-7142237,
           7142575-7142705,7142807-7142900,7143343-7143684,
           7143957-7144348,7145010-7148487,7149101-7149187,
           7149324-7149367,7149495-7149591,7150429-7150572
          Length = 1873

 Score = 34.7 bits (76), Expect = 0.057
 Identities = 14/55 (25%), Positives = 26/55 (47%)
 Frame = +3

Query: 384 CEECNKIIGIDSKDLSYKDKHWHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCYD 548
           C+ C + +    ++L+   + +H  CF C  C+ +L    + S    +YC   YD
Sbjct: 13  CDSCGRTV-YPVEELAADGRVYHRPCFRCTHCKATLQFSNYSSVEGVLYCKPHYD 66


>03_02_0828 -
           11592080-11592171,11592288-11592354,11592748-11592837,
           11592914-11592967,11593109-11593169,11593252-11593319,
           11593513-11593596,11594257-11594349,11594513-11594593,
           11594665-11594793,11595193-11595273,11595401-11595484,
           11596816-11596842,11597027-11597094,11597481-11597619
          Length = 405

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
 Frame = +3

Query: 444 HWHEACFLCAKCRVSLVDKQFGSKLD--KIYCGNCYDAQFASR--CDGCGEV 587
           +WHE   +     +    ++ G +LD  ++YCG+CY ++ +    C+ C +V
Sbjct: 164 YWHEGVVILLFLTIERPLQKHGGRLDHNEVYCGSCYGSEESDDQCCNSCEDV 215


>10_08_0547 -
           18682357-18682683,18682971-18683060,18683279-18683301,
           18683397-18683496,18683615-18683749
          Length = 224

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +3

Query: 384 CEECNKIIGIDSKDLSYKDK-HWHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCYDAQF 557
           C  C+K +     DL   D   +H++CF C+ C+ +L    + S    +YC   ++  F
Sbjct: 10  CNACDKTVHFI--DLLTADSIPYHKSCFRCSHCKGTLSMCSYSSMDGVLYCKTHFEQLF 66



 Score = 28.3 bits (60), Expect(2) = 0.45
 Identities = 13/52 (25%), Positives = 23/52 (44%)
 Frame = +3

Query: 384 CEECNKIIGIDSKDLSYKDKHWHEACFLCAKCRVSLVDKQFGSKLDKIYCGN 539
           C  C K +    + ++ + + +H  CF CA     L +  + S    +YC N
Sbjct: 104 CTACKKTV-YPLEKMTMEGECYHRTCFKCAHGGCLLTNASYASHNGILYCQN 154



 Score = 22.2 bits (45), Expect(2) = 0.45
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +3

Query: 264 WHSGHFCCWQCDESLTGQRYVLRDEHPYCIKCYESVF 374
           +H   F C  C  +L+   Y   D   YC   +E +F
Sbjct: 30  YHKSCFRCSHCKGTLSMCSYSSMDGVLYCKTHFEQLF 66


>02_05_0094 -
           25758213-25758479,25758886-25758975,25759090-25759118,
           25759208-25759307,25759411-25759545
          Length = 206

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 14/58 (24%), Positives = 27/58 (46%)
 Frame = +3

Query: 384 CEECNKIIGIDSKDLSYKDKHWHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCYDAQF 557
           C+ C+K +      L+     +H+ CF C+ C+ +L    + S    +YC   ++  F
Sbjct: 10  CKACDKTVHFIDL-LTADGVSYHKTCFKCSHCKGTLSMCNYSSMDGVLYCKTHFEQLF 66



 Score = 25.8 bits (54), Expect(2) = 2.9
 Identities = 11/50 (22%), Positives = 23/50 (46%)
 Frame = +3

Query: 384 CEECNKIIGIDSKDLSYKDKHWHEACFLCAKCRVSLVDKQFGSKLDKIYC 533
           C  C K +    + L+ + + +H++CF C+     L    + +    +YC
Sbjct: 106 CAACQKTV-YPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGILYC 154



 Score = 21.8 bits (44), Expect(2) = 2.9
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +3

Query: 264 WHSGHFCCWQCDESLTGQRYVLRDEHPYCIKCYESVF 374
           +H   F C  C  +L+   Y   D   YC   +E +F
Sbjct: 30  YHKTCFKCSHCKGTLSMCNYSSMDGVLYCKTHFEQLF 66


>06_01_0816 -
           6171189-6171255,6171277-6171441,6172037-6172618,
           6173451-6173761
          Length = 374

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +3

Query: 285 CWQCDESLTGQRYV-LRDEHPYCIKCYESVFANGCEE 392
           CW  D+ L  + Y  L+   PY   CYE+ F   C +
Sbjct: 224 CWNVDDKLLQESYPGLKVVGPYVDDCYENSFWEECSD 260


>03_02_0490 -
           8840577-8840914,8841009-8841067,8841168-8841283,
           8841578-8841640,8841826-8842038,8842211-8842330,
           8842453-8842578,8842593-8842749,8842830-8842962,
           8843054-8843138,8843305-8843421
          Length = 508

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +3

Query: 384 CEECNKIIGIDSKDLSYKDKHWHEACFLCAKCR 482
           C  C   IG     LS    +WH  CF C+ CR
Sbjct: 114 CGGCKHEIG-HGHYLSCLGMYWHPQCFRCSSCR 145


>12_02_0735 - 22636835-22639502,22639755-22640734
          Length = 1215

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +3

Query: 531 CGNCYDAQFASRCDGCGEVFRAGT 602
           C  CY    A  C GC E F AG+
Sbjct: 183 CKECYAECAAGNCPGCKEAFSAGS 206


>02_03_0113 -
           15381289-15381556,15381633-15381985,15382184-15382231,
           15382260-15382439,15382835-15382954
          Length = 322

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 84  WCDLFFFFFNKLGYDNTXRDRDPRAEFL 1
           W D F  + N L Y +  R  + RAE+L
Sbjct: 23  WGDFFLSYCNPLAYSDNQRSMEERAEYL 50


>12_02_0474 +
           19482150-19482152,19482205-19482336,19482513-19482602,
           19482649-19482708,19482959-19483058,19483137-19483234,
           19483351-19483525,19484167-19484270
          Length = 253

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/37 (27%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
 Frame = +3

Query: 321 YVLRDEHPYCIKCYESVFANGCEECNKII--GIDSKD 425
           ++ R+EHP+  + + ++   G  +C K++  G+++KD
Sbjct: 157 FITREEHPHFSRPWFTLHPCGTSDCMKLLLEGVENKD 193


>04_04_0611 -
           26594737-26594991,26595307-26595396,26595490-26595515,
           26595603-26595702,26595820-26595954
          Length = 201

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/58 (24%), Positives = 25/58 (43%)
 Frame = +3

Query: 384 CEECNKIIGIDSKDLSYKDKHWHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCYDAQF 557
           C  C+K +      L+     +H+ CF C+ C+  L    + S    +YC   ++  F
Sbjct: 10  CTACDKTVHFIDL-LTADGVPYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHFEQLF 66


>03_05_0434 +
           24252994-24253449,24254791-24254877,24255450-24255748,
           24256146-24256383,24256907-24257441,24257527-24257729,
           24258311-24258520
          Length = 675

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = -1

Query: 356 LDAVGVFIPKNIALAS*RLVALPAAEVTAMPVLVHGLGVFTAIVVIGGV 210
           L  V +F  + +A+ S  ++ L A EV        G+G+ TAI  IGGV
Sbjct: 581 LTTVLLFGARAVAMGSFTVLCLYAPEVYPTSARSTGVGIATAIGRIGGV 629


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,361,148
Number of Sequences: 37544
Number of extensions: 239056
Number of successful extensions: 803
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)