Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0735
(602 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.) 135 3e-32
SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32) 101 3e-22
SB_13716| Best HMM Match : LIM (HMM E-Value=0) 81 5e-16
SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39) 81 9e-16
SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22) 79 2e-15
SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34) 78 5e-15
SB_30367| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 8e-15
SB_15482| Best HMM Match : LIM (HMM E-Value=0) 52 3e-07
SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 6e-07
SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43) 48 8e-06
SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15) 45 5e-05
SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_29553| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42) 42 5e-04
SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40) 41 7e-04
SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35) 41 9e-04
SB_9634| Best HMM Match : zf-C2H2 (HMM E-Value=0) 40 0.001
SB_20996| Best HMM Match : LIM (HMM E-Value=9e-22) 38 0.006
SB_40829| Best HMM Match : LIM (HMM E-Value=1.7e-14) 37 0.011
SB_16622| Best HMM Match : zf-C2H2 (HMM E-Value=0) 34 0.10
SB_31712| Best HMM Match : LIM (HMM E-Value=9e-26) 33 0.18
SB_2694| Best HMM Match : LIM (HMM E-Value=6.6e-14) 33 0.24
SB_43770| Best HMM Match : PET (HMM E-Value=8.8e-24) 31 0.95
SB_44860| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07) 30 1.7
SB_52925| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 2.2
SB_50164| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 2.2
SB_32903| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_48895| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_22835| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 3.8
SB_43175| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_33424| Best HMM Match : zf-B_box (HMM E-Value=2.2e-18) 28 5.1
SB_20707| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_37120| Best HMM Match : EB (HMM E-Value=4.2) 28 6.7
SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10) 27 8.8
SB_54646| Best HMM Match : WCCH (HMM E-Value=1.3) 27 8.8
SB_5864| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
>SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 135 bits (326), Expect = 3e-32
Identities = 55/124 (44%), Positives = 81/124 (65%), Gaps = 2/124 (1%)
Frame = +3
Query: 234 GEYTKAMNKDWHSGHFCCWQCDESLTGQRYVLRDEHPYCIKCYESVFANGCEECNKIIGI 413
GEYT AMNK+WH GHF C CD S+TG+++++R + P C C++ +A+ CE C++ IG
Sbjct: 289 GEYTVAMNKNWHLGHFQCQTCDHSITGRQFIVRGDKPVCTDCFKDSYAHECEACHQKIGP 348
Query: 414 DSKDLSY-KDKHWHEACFLCAKCRVSL-VDKQFGSKLDKIYCGNCYDAQFASRCDGCGEV 587
+S+D+S D+HWH+ CF+C CR L D +F D+I C NCY A + C CG++
Sbjct: 349 ESRDISSDDDRHWHDKCFICDICRRPLKSDGKFTFYRDQILCNNCYVANYQKECFACGQM 408
Query: 588 FRAG 599
+G
Sbjct: 409 IDSG 412
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 1/116 (0%)
Frame = +3
Query: 255 NKDWHSGHFCCWQCDESLTGQ-RYVLRDEHPYCIKCYESVFANGCEECNKIIGIDSKDLS 431
++ WH F C C L ++ + C CY + + C C ++I + L
Sbjct: 358 DRHWHDKCFICDICRRPLKSDGKFTFYRDQILCNNCYVANYQKECFACGQMIDSGASRLE 417
Query: 432 YKDKHWHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCYDAQFASRCDGCGEVFRAG 599
Y WHE CF CA C ++ F K D +C CY ++F+ RC CGE G
Sbjct: 418 YSGNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKFSKRCASCGEPLLEG 473
Score = 79.4 bits (187), Expect = 2e-15
Identities = 32/95 (33%), Positives = 54/95 (56%)
Frame = +3
Query: 264 WHSGHFCCWQCDESLTGQRYVLRDEHPYCIKCYESVFANGCEECNKIIGIDSKDLSYKDK 443
WH F C+ C SL + +RD YC++CY +A CE C K I + + + ++
Sbjct: 482 WHKACFSCYFCHRSLASAAFSVRDGCRYCMECYGKFYAKQCEICLKAI-VGGEYYTLEES 540
Query: 444 HWHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCYD 548
++H+ CF+C++C SL + F + D++ CG+C D
Sbjct: 541 NFHKECFMCSRCGRSLASEGFVREGDELLCGDCAD 575
Score = 75.8 bits (178), Expect = 3e-14
Identities = 36/118 (30%), Positives = 55/118 (46%)
Frame = +3
Query: 225 DDGGEYTKAMNKDWHSGHFCCWQCDESLTGQRYVLRDEHPYCIKCYESVFANGCEECNKI 404
D G + WH F C C E++ +V +D+ +C CY+S F+ C C +
Sbjct: 410 DSGASRLEYSGNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKFSKRCASCGEP 469
Query: 405 IGIDSKDLSYKDKHWHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCYDAQFASRCDGC 578
+ ++ L Y + WH+ACF C C SL F + YC CY +A +C+ C
Sbjct: 470 L-LEGGVL-YNGETWHKACFSCYFCHRSLASAAFSVRDGCRYCMECYGKFYAKQCEIC 525
Score = 30.7 bits (66), Expect = 0.95
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +3
Query: 231 GGEYTKAMNKDWHSGHFCCWQCDESLTGQRYVLRDEHPYCIKC 359
GGEY ++H F C +C SL + +V + C C
Sbjct: 531 GGEYYTLEESNFHKECFMCSRCGRSLASEGFVREGDELLCGDC 573
>SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32)
Length = 648
Score = 101 bits (243), Expect = 3e-22
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
Frame = +3
Query: 243 TKAMNKDWHSGHFCCWQCDESLTGQRYVLRDEHPYCIKCYESVFANGCEECNKIIGIDSK 422
T+A + WH HFCC++CD L G RYV+RD PYC C+ES++A C+ C + I D+
Sbjct: 156 TEAEDSCWHVQHFCCFECDCPLGGMRYVMRDNKPYCCHCFESLYAEFCDSCGEPIEPDAS 215
Query: 423 DLSYKDKHWH--EACFLCAKCRVSLVDKQFGSKLDKIYC 533
+++ +HWH CF C C +L+ F K +IYC
Sbjct: 216 QMAHNGQHWHATNECFSCCTCGKALLGLPFLPKSGEIYC 254
Score = 69.7 bits (163), Expect = 2e-12
Identities = 32/107 (29%), Positives = 51/107 (47%)
Frame = +3
Query: 264 WHSGHFCCWQCDESLTGQRYVLRDEHPYCIKCYESVFANGCEECNKIIGIDSKDLSYKDK 443
WH+ F C C E L Y +D YC + + C C++II + + +D
Sbjct: 103 WHASCFICTTCKELLVDLIYFYKDSKVYCGRHHAETLKPRCAACDEIIFAE-QCTEAEDS 161
Query: 444 HWHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCYDAQFASRCDGCGE 584
WH F C +C L ++ + +K YC +C+++ +A CD CGE
Sbjct: 162 CWHVQHFCCFECDCPLGGMRYVMRDNKPYCCHCFESLYAEFCDSCGE 208
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = +3
Query: 384 CEECNKIIGIDSKDL--SYKDKH--WHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCYDA 551
C+EC + + S + S +H WH +CF+C C+ LVD + K K+YCG +
Sbjct: 78 CKECGECVTAGSMAVYASRAGQHTCWHASCFICTTCKELLVDLIYFYKDSKVYCGRHHAE 137
Query: 552 QFASRCDGCGEVFRA 596
RC C E+ A
Sbjct: 138 TLKPRCAACDEIIFA 152
>SB_13716| Best HMM Match : LIM (HMM E-Value=0)
Length = 401
Score = 81.4 bits (192), Expect = 5e-16
Identities = 42/112 (37%), Positives = 55/112 (49%)
Frame = +3
Query: 234 GEYTKAMNKDWHSGHFCCWQCDESLTGQRYVLRDEHPYCIKCYESVFANGCEECNKIIGI 413
G+ A+ K WH HF C C+ L Q + RD PYC + Y FA C CN I +
Sbjct: 291 GQVCTALGKTWHPEHFACVACEAPLGTQNFFERDGKPYCERDYHDTFAPRCAYCNGPI-L 349
Query: 414 DSKDLSYKDKHWHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCYDAQFASRC 569
DS ++ D+ WH F+CA+C D F + K +C Y A FA RC
Sbjct: 350 DS-CVTALDQTWHPEHFVCAECGNPFGDTGFHERDGKPFCREDYYAMFAPRC 400
Score = 40.7 bits (91), Expect = 9e-04
Identities = 25/66 (37%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +3
Query: 384 CEECNK-IIGIDSKDLSYKDKHWHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCYDAQFA 560
C CNK IIG L K WH F C C L + F + K YC Y FA
Sbjct: 282 CAACNKPIIGQVCTALG---KTWHPEHFACVACEAPLGTQNFFERDGKPYCERDYHDTFA 338
Query: 561 SRCDGC 578
RC C
Sbjct: 339 PRCAYC 344
>SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39)
Length = 351
Score = 80.6 bits (190), Expect = 9e-16
Identities = 34/116 (29%), Positives = 56/116 (48%)
Frame = +3
Query: 255 NKDWHSGHFCCWQCDESLTGQRYVLRDEHPYCIKCYESVFANGCEECNKIIGIDSKDLSY 434
+K +H F C +C + + ++++ RDE C C++S FA C +CN++I S + +
Sbjct: 194 SKTFHDKCFICDECKQPIGSKQFIRRDERRLCNNCFDSKFAKVCVKCNQVIKTSS--VQH 251
Query: 435 KDKHWHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCYDAQFASRCDGCGEVFRAGT 602
+H CF C C L F + + C NCY ++A RC C + T
Sbjct: 252 AGSTYHSECFTCHHCDKPLAGSPFTKQEGRNVCQNCYRERYAKRCGACHNLIEGNT 307
Score = 70.5 bits (165), Expect = 1e-12
Identities = 32/106 (30%), Positives = 53/106 (50%)
Frame = +3
Query: 285 CWQCDESLTGQRYVLRDEHPYCIKCYESVFANGCEECNKIIGIDSKDLSYKDKHWHEACF 464
C C+E G + L+DE C C + C CN K + Y+ K +H+ CF
Sbjct: 145 CAGCEEMNEG--FTLKDEKLICHGCRGINPSKVCAACNGDFAPGEKKVGYQSKTFHDKCF 202
Query: 465 LCAKCRVSLVDKQFGSKLDKIYCGNCYDAQFASRCDGCGEVFRAGT 602
+C +C+ + KQF + ++ C NC+D++FA C C +V + +
Sbjct: 203 ICDECKQPIGSKQFIRRDERRLCNNCFDSKFAKVCVKCNQVIKTSS 248
Score = 69.3 bits (162), Expect = 2e-12
Identities = 29/95 (30%), Positives = 48/95 (50%)
Frame = +3
Query: 264 WHSGHFCCWQCDESLTGQRYVLRDEHPYCIKCYESVFANGCEECNKIIGIDSKDLSYKDK 443
+HS F C CD+ L G + ++ C CY +A C C+ +I ++K ++Y +K
Sbjct: 256 YHSECFTCHHCDKPLAGSPFTKQEGRNVCQNCYRERYAKRCGACHNLIEGNTKFVAYDEK 315
Query: 444 HWHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCYD 548
++H CF C KC L ++F + + C C D
Sbjct: 316 YFHRECFTCCKCNKPLAGEKFRIRDGEKICLPCDD 350
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = +3
Query: 438 DKHWHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCYDAQFASRCDGCGEV 587
D WH CF C + LVD + SK D+IYC + + RC GC E+
Sbjct: 102 DSCWHVKCFTCEEDGELLVDLIYCSKDDEIYCCRHWGEKLKPRCAGCEEM 151
Score = 32.3 bits (70), Expect = 0.31
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 258 KDWHSGHFCCWQCDESLTGQRYVLRDEHPYCIKC 359
K +H F C +C++ L G+++ +RD C+ C
Sbjct: 315 KYFHRECFTCCKCNKPLAGEKFRIRDGEKICLPC 348
>SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22)
Length = 163
Score = 79.4 bits (187), Expect = 2e-15
Identities = 32/95 (33%), Positives = 54/95 (56%)
Frame = +3
Query: 264 WHSGHFCCWQCDESLTGQRYVLRDEHPYCIKCYESVFANGCEECNKIIGIDSKDLSYKDK 443
WH F C+ C SL + +RD YC++CY +A CE C K I + + + ++
Sbjct: 70 WHKACFSCYFCHRSLASAAFSVRDGCRYCMECYGKFYAKQCEICLKAI-VGGEYYTLEES 128
Query: 444 HWHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCYD 548
++H+ CF+C++C SL + F + D++ CG+C D
Sbjct: 129 NFHKECFMCSRCGRSLASEGFVREGDELLCGDCAD 163
Score = 74.1 bits (174), Expect = 8e-14
Identities = 34/105 (32%), Positives = 52/105 (49%)
Frame = +3
Query: 264 WHSGHFCCWQCDESLTGQRYVLRDEHPYCIKCYESVFANGCEECNKIIGIDSKDLSYKDK 443
WH F C C E++ +V +D+ +C CY+S F+ C C + + ++ L Y +
Sbjct: 11 WHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKFSKRCASCGEPL-LEGGVL-YNGE 68
Query: 444 HWHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCYDAQFASRCDGC 578
WH+ACF C C SL F + YC CY +A +C+ C
Sbjct: 69 TWHKACFSCYFCHRSLASAAFSVRDGCRYCMECYGKFYAKQCEIC 113
Score = 58.4 bits (135), Expect = 4e-09
Identities = 23/58 (39%), Positives = 29/58 (50%)
Frame = +3
Query: 426 LSYKDKHWHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCYDAQFASRCDGCGEVFRAG 599
L Y WHE CF CA C ++ F K D +C CY ++F+ RC CGE G
Sbjct: 4 LEYSGNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKFSKRCASCGEPLLEG 61
Score = 30.7 bits (66), Expect = 0.95
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +3
Query: 231 GGEYTKAMNKDWHSGHFCCWQCDESLTGQRYVLRDEHPYCIKC 359
GGEY ++H F C +C SL + +V + C C
Sbjct: 119 GGEYYTLEESNFHKECFMCSRCGRSLASEGFVREGDELLCGDC 161
>SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34)
Length = 621
Score = 78.2 bits (184), Expect = 5e-15
Identities = 33/87 (37%), Positives = 50/87 (57%)
Frame = +3
Query: 240 YTKAMNKDWHSGHFCCWQCDESLTGQRYVLRDEHPYCIKCYESVFANGCEECNKIIGIDS 419
YT+A +++WH HFCC +CD L GQ YV R P+C++CY+ +A C C K I D+
Sbjct: 386 YTQAEDRNWHQRHFCCLECDRDLGGQLYVARGGQPHCLECYDKYYAKHCMSCKKNIAADA 445
Query: 420 KDLSYKDKHWHEACFLCAKCRVSLVDK 500
+ ++ A FL + R SL+ +
Sbjct: 446 QRFEHQ-----VAKFLITQYRTSLIGR 467
Score = 67.3 bits (157), Expect = 9e-12
Identities = 31/108 (28%), Positives = 53/108 (49%)
Frame = +3
Query: 255 NKDWHSGHFCCWQCDESLTGQRYVLRDEHPYCIKCYESVFANGCEECNKIIGIDSKDLSY 434
+K WH G F C C+ L Y +D YC + Y F C C+++I ++ +
Sbjct: 331 DKCWHPGCFVCTVCNNLLVDLIYFYKDGVIYCGRHYAEQFKPRCAACDELIFSETYTQA- 389
Query: 435 KDKHWHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCYDAQFASRCDGC 578
+D++WH+ F C +C L + + ++ + +C CYD +A C C
Sbjct: 390 EDRNWHQRHFCCLECDRDLGGQLYVARGGQPHCLECYDKYYAKHCMSC 437
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/56 (42%), Positives = 29/56 (51%)
Frame = +3
Query: 435 KDKHWHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCYDAQFASRCDGCGEVFRAGT 602
+DK WH CF+C C LVD + K IYCG Y QF RC C E+ + T
Sbjct: 330 EDKCWHPGCFVCTVCNNLLVDLIYFYKDGVIYCGRHYAEQFKPRCAACDELIFSET 385
>SB_30367| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 77.4 bits (182), Expect = 8e-15
Identities = 35/114 (30%), Positives = 54/114 (47%)
Frame = +3
Query: 255 NKDWHSGHFCCWQCDESLTGQRYVLRDEHPYCIKCYESVFANGCEECNKIIGIDSKDLSY 434
NK HS F C+ C L G+ + +RD+ C C +A C C + I K ++
Sbjct: 18 NKPHHSECFVCFHCRTPLAGKTFQMRDDRKVCKDCNRIHYAKRCVACRQYIEGTVKFVTR 77
Query: 435 KDKHWHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCYDAQFASRCDGCGEVFRA 596
+ +H CF+C++CR L K F C +CY ++A RC+ C + A
Sbjct: 78 DEGTYHSDCFVCSRCRKPLAGKTFTEHEGSWVCDDCYHDRYAKRCNMCHQSLEA 131
Score = 57.6 bits (133), Expect = 7e-09
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Frame = +3
Query: 264 WHSGHFCCWQCDESLTGQRYVLRDEHPYCIKCYESVFANGCEECNKIIGIDSKDLSYKDK 443
+HS F C +C + L G+ + + C CY +A C C++ + + + + Y +K
Sbjct: 82 YHSDCFVCSRCRKPLAGKTFTEHEGSWVCDDCYHDRYAKRCNMCHQSLEANVEFVKYDEK 141
Query: 444 HWHEACFLC--AKCRVSLVDKQFGSKLD-KIYCGNC 542
+H CF+C +CR L +F K D + C NC
Sbjct: 142 LYHNECFVCQNPRCRKPLSGAKFALKSDGRRMCLNC 177
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/65 (35%), Positives = 31/65 (47%)
Frame = +3
Query: 384 CEECNKIIGIDSKDLSYKDKHWHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCYDAQFAS 563
C C K I S + Y++K H CF+C CR L K F + D+ C +C +A
Sbjct: 2 CNSCFKTI--TSSVVRYQNKPHHSECFVCFHCRTPLAGKTFQMRDDRKVCKDCNRIHYAK 59
Query: 564 RCDGC 578
RC C
Sbjct: 60 RCVAC 64
>SB_15482| Best HMM Match : LIM (HMM E-Value=0)
Length = 349
Score = 52.4 bits (120), Expect = 3e-07
Identities = 28/80 (35%), Positives = 39/80 (48%)
Frame = +3
Query: 357 CYESVFANGCEECNKIIGIDSKDLSYKDKHWHEACFLCAKCRVSLVDKQFGSKLDKIYCG 536
C ++ N C CN+ I D + D+ WHE+C C CR L F SK K+YC
Sbjct: 37 CGQNGRVNICTGCNEPIE-DRFLMKVVDEAWHESCLQCCICRSQLSRSCF-SKDRKLYCR 94
Query: 537 NCYDAQFASRCDGCGEVFRA 596
Y+ F ++C GC + A
Sbjct: 95 TDYEKVFGTKCSGCKKTIPA 114
Score = 51.2 bits (117), Expect = 6e-07
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = +3
Query: 246 KAMNKDWHSGHFCCWQCDESLTGQRYVLRDEHPYCIKCYESVFANGCEECNKIIGIDSKD 425
K +++ WH C C L+ + +D YC YE VF C C K I +
Sbjct: 60 KVVDEAWHESCLQCCICRSQLSRSCFS-KDRKLYCRTDYEKVFGTKCSGCKKTIPANELV 118
Query: 426 LSYKDKHWHEACFLCAKC-RVSLVDKQFGSKLDKIYC 533
+ +H CF+C C + ++F K +K+YC
Sbjct: 119 MRALGNVYHLHCFVCTMCGHILEKGQEFALKDNKLYC 155
>SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 51.2 bits (117), Expect = 6e-07
Identities = 22/58 (37%), Positives = 30/58 (51%)
Frame = +3
Query: 249 AMNKDWHSGHFCCWQCDESLTGQRYVLRDEHPYCIKCYESVFANGCEECNKIIGIDSK 422
A+ K WH HF C +C++ G RY R YC Y ++ + C ECNK I D +
Sbjct: 95 ALGKAWHVEHFVCAKCEKPFYGHRYYERKGLAYCETHYNELYGDICFECNKAITGDGE 152
Score = 44.0 bits (99), Expect = 1e-04
Identities = 29/125 (23%), Positives = 47/125 (37%), Gaps = 8/125 (6%)
Frame = +3
Query: 234 GEYTKAMNKDWHSGHFCCWQCDESLT--------GQRYVLRDEHPYCIKCYESVFANGCE 389
G KAM +WH F C C++ L G Y+ EH + + C
Sbjct: 23 GRVIKAMQANWHPDCFRCEICNDCLADTGFVKNAGSTYIPEGEHIMYMGDPVHPWHYNCF 82
Query: 390 ECNKIIGIDSKDLSYKDKHWHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCYDAQFASRC 569
C + ++ + + K WH F+CAKC ++ + YC Y+ + C
Sbjct: 83 CCGR--PVEDRVVHALGKAWHVEHFVCAKCEKPFYGHRYYERKGLAYCETHYNELYGDIC 140
Query: 570 DGCGE 584
C +
Sbjct: 141 FECNK 145
>SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43)
Length = 511
Score = 47.6 bits (108), Expect = 8e-06
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Frame = +3
Query: 240 YTKAMNKDWHSGHFCCWQCDESLTGQRYVL-RDEHPYCIKCYESVFA-NGCEECNKIIGI 413
Y A++++WH+ C C+ L + +D C + Y F+ C C++ I
Sbjct: 260 YLMAVDQEWHADCLKCSDCELRLDNELTCFSKDGVILCREDYYRRFSVKKCSSCSQAISS 319
Query: 414 DSKDLSYKDKHWHEACFLCAKC-RVSLVDKQFGSKLDKIYCGNCYD 548
+ +D+ +H CF C +C R+ + FG + +IYC Y+
Sbjct: 320 KELVMRARDQVYHVNCFACDRCKRMLATGEYFGMRGIRIYCKEDYE 365
>SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15)
Length = 85
Score = 44.8 bits (101), Expect = 5e-05
Identities = 21/66 (31%), Positives = 29/66 (43%)
Frame = +3
Query: 384 CEECNKIIGIDSKDLSYKDKHWHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCYDAQFAS 563
C C+K + + L+ K WH++C C C SL K +IYC CY F
Sbjct: 10 CPRCSKTVYKAEERLAI-GKKWHKSCLTCKCCNKSLDSTNLADKDGEIYCKGCYGKNFGP 68
Query: 564 RCDGCG 581
+ G G
Sbjct: 69 KGYGYG 74
Score = 32.3 bits (70), Expect = 0.31
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +3
Query: 249 AMNKDWHSGHFCCWQCDESLTGQRYVLRDEHPYCIKCYESVF 374
A+ K WH C C++SL +D YC CY F
Sbjct: 25 AIGKKWHKSCLTCKCCNKSLDSTNLADKDGEIYCKGCYGKNF 66
>SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/59 (35%), Positives = 27/59 (45%)
Frame = +3
Query: 231 GGEYTKAMNKDWHSGHFCCWQCDESLTGQRYVLRDEHPYCIKCYESVFANGCEECNKII 407
G + A+ K WH F C +C L Y+ D PYC K Y+ +F C CN I
Sbjct: 98 GSQALLALEKQWHLWCFSCTKC-HCLLSLEYMGMDGKPYCEKDYQELFGVTCAACNGYI 155
Score = 41.9 bits (94), Expect = 4e-04
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 12/98 (12%)
Frame = +3
Query: 336 EHPYCIKCYESVFANGCEECNKIIGIDSKDLSYKDKHWHEACFLCAKCRVSL--VDKQFG 509
E YC Y++ + C+ C + ++ + +S K++HEACF C CR DK
Sbjct: 3 EQYYCKDDYQNQYGKKCDSCQ--LYLEGEIISIHGKNFHEACFACNSCRQPFPPSDKIIF 60
Query: 510 SKLDKIYCGNCYDA----------QFASRCDGCGEVFR 593
+ D + C C +A + C GCGE +
Sbjct: 61 TGTDYL-CQTCNNAPKAPTTKVSSPYLHTCAGCGEAIK 97
Score = 41.9 bits (94), Expect = 4e-04
Identities = 32/126 (25%), Positives = 45/126 (35%), Gaps = 11/126 (8%)
Frame = +3
Query: 234 GEYTKAMNKDWHSGHFCCWQCDESLTGQRYVLRDEHPY-CIKC----------YESVFAN 380
GE K++H F C C + ++ Y C C S + +
Sbjct: 28 GEIISIHGKNFHEACFACNSCRQPFPPSDKIIFTGTDYLCQTCNNAPKAPTTKVSSPYLH 87
Query: 381 GCEECNKIIGIDSKDLSYKDKHWHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCYDAQFA 560
C C + I S+ L +K WH CF C KC L+ ++ K YC Y F
Sbjct: 88 TCAGCGEAIK-GSQALLALEKQWHLWCFSCTKCH-CLLSLEYMGMDGKPYCEKDYQELFG 145
Query: 561 SRCDGC 578
C C
Sbjct: 146 VTCAAC 151
>SB_29553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 573
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +3
Query: 363 ESVFANGCEECNKIIGIDSKDLSYKDKHWHEACFLCAKCRVSL--VDKQFGSKLDKIYCG 536
+S +N C+ C K + I + ++ ++ +H+ACF+CA C V L + F DK YC
Sbjct: 238 QSFESNRCDSCGKSVDILER-VAVENHVFHKACFVCAICNVWLNHFNYCFVPDHDKFYCV 296
Query: 537 NCY-DAQFASRCDGCGEVFRA 596
Y D + A+ G GE+ +A
Sbjct: 297 QHYQDIENATEGLGSGEIRKA 317
>SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42)
Length = 328
Score = 41.5 bits (93), Expect = 5e-04
Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 2/98 (2%)
Frame = +3
Query: 246 KAMNKDWHSGHFCCWQCDESLTGQRYVL-RDEHPYCIKCYESVFANGCEECNKIIGIDSK 422
K + WH+ C C + L + +D YC Y F C C + I +
Sbjct: 116 KVSGRAWHTKCLKCCLCSDELGREATCYTKDGKIYCKADYARQFGTKCARCGRSIHANDW 175
Query: 423 DLSYKDKHWHEACFLCAKCRVSL-VDKQFGSKLDKIYC 533
K+ +H ACF C C+ L ++F K + C
Sbjct: 176 VRRAKNCVYHLACFACDNCKRQLSTGEEFALKDGHVLC 213
Score = 37.9 bits (84), Expect = 0.006
Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Frame = +3
Query: 384 CEECNKIIGIDSKDLSYKDKHWHEACFLCAKCRVSLV-DKQFGSKLDKIYCGNCYDAQFA 560
C C I +D + + WH C C C L + +K KIYC Y QF
Sbjct: 102 CVGCEAKI-VDRYLVKVSGRAWHTKCLKCCLCSDELGREATCYTKDGKIYCKADYARQFG 160
Query: 561 SRCDGCGEVFRA 596
++C CG A
Sbjct: 161 TKCARCGRSIHA 172
>SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40)
Length = 434
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = +3
Query: 384 CEECNKIIGIDSKDLSYKDKHWHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCYDAQFAS 563
C C I D L D WH C C+ C+ L ++ F S+ K++C + ++ +
Sbjct: 5 CAGCQLPIA-DKFLLKVLDGVWHAQCVQCSDCKCPLTERCF-SREGKLFCKTDFYRRYGT 62
Query: 564 RCDGCGE 584
+C GC +
Sbjct: 63 KCSGCDQ 69
>SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35)
Length = 160
Score = 40.7 bits (91), Expect = 9e-04
Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 5/101 (4%)
Frame = +3
Query: 246 KAMNKDWHSGHFCCWQCDESL--TGQRYVLRDEHPYCIKCYESVFA--NGCEECNKIIGI 413
+A+ WH G C CD L G + C + Y +F C CNK I
Sbjct: 31 QALGSYWHEGCLKCECCDSRLGDIGSSLYSKANLILCKRDYLRLFGIPGVCSHCNKPIAA 90
Query: 414 DSKDLSYKDKHWHEACFLCAKCRVSL-VDKQFGSKLDKIYC 533
+ ++ +H CF C +CR L V + F +K+ C
Sbjct: 91 FELVMRARNNAYHIECFGCQRCRKRLVVGEAFCFHDNKVLC 131
>SB_9634| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 587
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Frame = +3
Query: 279 FCCWQCDESLTGQRYVL--RDEHPYCIKCYESVFANGCEECNKIIGIDSKDLSYKDKHWH 452
F C +C + + G++ L R HP K ++ CE C+++ S ++ H H
Sbjct: 244 FRCSKCSDQIQGKKEYLEHRKSHPIERKIHK------CEVCSRVFNKCSNLKAHALSHSH 297
Query: 453 EACFLCAKCRVSLVDKQFGSKLDKIYCGNCYDAQFASRCDGCGEVFRAGT 602
E + C KC DK F + ++++ CD C + FR T
Sbjct: 298 ERPYACDKC-----DKTFQRTSQLVIHNRIHNSETPYSCDKCEKSFRGRT 342
>SB_20996| Best HMM Match : LIM (HMM E-Value=9e-22)
Length = 81
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = +3
Query: 333 DEHPYCIKCYESVFANGCEECNKIIGIDSKDLSYKDKHWHEACFLCAKCRVSLVDKQFGS 512
D PYC Y + C C K I + ++ + +H F+CA C L F
Sbjct: 8 DGRPYCEMHYHAKRGTLCYSCQK--PITGRCITAMHRKFHPEHFVCAFCLKQLNKGTFKE 65
Query: 513 KLDKIYCGNCY 545
+ DK YC C+
Sbjct: 66 QNDKPYCHPCF 76
Score = 35.1 bits (77), Expect = 0.044
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 234 GEYTKAMNKDWHSGHFCCWQCDESLTGQRYVLRDEHPYCIKCYESVF 374
G AM++ +H HF C C + L + +++ PYC C+ +F
Sbjct: 34 GRCITAMHRKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCHPCFVKLF 80
>SB_40829| Best HMM Match : LIM (HMM E-Value=1.7e-14)
Length = 82
Score = 37.1 bits (82), Expect = 0.011
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 237 EYTKAMNKDWHSGHFCCWQCDESLTGQRYVLRDEHPYCIKCYESVFANGCEEC-NKIIGI 413
EY A+ K +H+ F C C+E L+ Y R YC K Y S F + C C + I G+
Sbjct: 22 EYKYAIGKRFHNACFRCVVCEERLSTDFYA-RGSELYCKKDYLSKFNSVCHICAHNIAGL 80
Score = 34.3 bits (75), Expect = 0.077
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 441 KHWHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCYDAQFASRCDGC 578
K +H ACF C C L F ++ ++YC Y ++F S C C
Sbjct: 29 KRFHNACFRCVVCEERL-STDFYARGSELYCKKDYLSKFNSVCHIC 73
>SB_16622| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1239
Score = 33.9 bits (74), Expect = 0.10
Identities = 31/105 (29%), Positives = 47/105 (44%)
Frame = +3
Query: 279 FCCWQCDESLTGQRYVLRDEHPYCIKCYESVFANGCEECNKIIGIDSKDLSYKDKHWHEA 458
F C CD T +R + + H + + E F CEEC + DS++ HE
Sbjct: 1059 FHCHGCDRQFTTRRAL--NIH-FRVHTEEHYFQ--CEECPR--KCDSEETFLMHMRLHEG 1111
Query: 459 CFLCAKCRVSLVDKQFGSKLDKIYCGNCYDAQFASRCDGCGEVFR 593
F C KC ++ + S+L ++ D F +CD CG+ FR
Sbjct: 1112 SFKCPKCPMTFPRR---SRL-AVHVRTHSDKVF--QCDQCGKSFR 1150
>SB_31712| Best HMM Match : LIM (HMM E-Value=9e-26)
Length = 481
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +3
Query: 369 VFANGCEECNKIIGIDSKDLSYKDKHWHEACFLCAKC-RVSLVDKQFGSKLDKIYC 533
VF C C K I + + +H CF+C C + ++F K +K+YC
Sbjct: 2 VFGTKCSGCKKTIPANELVMRALGNVYHLHCFVCTMCGHILEKGQEFALKDNKLYC 57
>SB_2694| Best HMM Match : LIM (HMM E-Value=6.6e-14)
Length = 446
Score = 32.7 bits (71), Expect = 0.24
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 384 CEECNKIIGIDSKDLSYKDKHWHEACFLCAKCR 482
C C+K+ ++ +S K WH++CF CA+ R
Sbjct: 297 CGRCDKMC-YHAEGISMAGKRWHKSCFACAEVR 328
>SB_43770| Best HMM Match : PET (HMM E-Value=8.8e-24)
Length = 251
Score = 30.7 bits (66), Expect = 0.95
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 438 DKHWHEACFLCAKCRVSLVDKQFGSKLDKIYC 533
D WH CF C + LVD + SK +IYC
Sbjct: 215 DSCWHVKCFTCEEDGELLVDLIYCSKDAEIYC 246
>SB_44860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 431
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 384 CEECNKIIGIDSKDLSYKDKHWHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCYDAQFAS 563
C+EC K G ++ H + + C +C KQF S KI+ + Q
Sbjct: 139 CDECGKCFGRSGNLKTHLLIHTGQKPYKCDECGKCF--KQFASL--KIHL-LIHSGQKPH 193
Query: 564 RCDGCGEVF-RAG 599
+CD CGE F R+G
Sbjct: 194 KCDECGECFTRSG 206
>SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07)
Length = 2128
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Frame = +3
Query: 441 KHWHEACFLCAKCRVSLVDKQFGSKL----DKIYCGNCY 545
++WH+ CF C C V + S L ++C NC+
Sbjct: 2051 RYWHDDCFSCVVCHVRFGTAEQRSPLKITDSLLHCENCF 2089
>SB_52925| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 393
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/70 (27%), Positives = 28/70 (40%)
Frame = +3
Query: 384 CEECNKIIGIDSKDLSYKDKHWHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCYDAQFAS 563
C+EC K +++ H + + C KC K FG + Y Q
Sbjct: 62 CDECGKCFARRPNLKAHQKIHSGQKPYECDKC-----GKCFGRREHLKIHQIVYSGQKPH 116
Query: 564 RCDGCGEVFR 593
+CD CG+ FR
Sbjct: 117 KCDECGKCFR 126
>SB_50164| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1780
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 384 CEECNKIIGIDSKDLSYKDKHWHEACFLCAKC 479
CE+C KI G S +K H E ++C+ C
Sbjct: 499 CEQCGKIFGSSSALAKHKLTHSDERRYVCSIC 530
>SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1498
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
Frame = +3
Query: 273 GHFCCWQCDESLTGQRYVLR-----DEHPYCIKCYES 368
G+F C QCD+SL Q Y+ R P C C E+
Sbjct: 853 GNFKCEQCDKSLLSQYYLKRHLLTHTRSPSCASCKET 889
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/67 (22%), Positives = 29/67 (43%)
Frame = +3
Query: 279 FCCWQCDESLTGQRYVLRDEHPYCIKCYESVFANGCEECNKIIGIDSKDLSYKDKHWHEA 458
+ C QCD++ Y+ + + V C C+K + ++++ KH E
Sbjct: 478 YTCSQCDKAFKAPHYLALHMKSHSMANVTFV----CSVCDKEFRSKTALINHQVKHLDER 533
Query: 459 CFLCAKC 479
F C++C
Sbjct: 534 PFTCSEC 540
>SB_32903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 29.1 bits (62), Expect = 2.9
Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 2/120 (1%)
Frame = +3
Query: 237 EYTKAMNKDWHSG-HFCCWQCDESLTGQRYVLRDEHPYCIKCYESVFANGCEECNKIIGI 413
E+ +D HS H ++CD+ +RY D K ES ++ C+EC K+
Sbjct: 344 EFRSKEERDEHSNMHKKNYKCDDC--NKRYFSYDALE-AHKQTES-HSHTCDECGKVFHS 399
Query: 414 DSKDLSYKDKHWHEACFLCAKCRVSLV-DKQFGSKLDKIYCGNCYDAQFASRCDGCGEVF 590
+K H E F C C + D + ++C + +C+ CG+ F
Sbjct: 400 QIYLKRHKTVHVEERNFPCEICNKAYTSDANLKAHKRSVHC-----IEKKHKCEECGKAF 454
>SB_48895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 829
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = +3
Query: 375 ANGCEECNKIIGIDSKDLSYKDKHWHEACFLCAKCRVSLV-DKQFGSKLDKIYCGN 539
+ C C K+I + K +H CF C C LV +F +++C N
Sbjct: 705 SGACAVCAKLIPATELVMKVLGKVYHLHCFTCTTCHNQLVPGDRFHVVNGRLFCEN 760
>SB_22835| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 594
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 8/77 (10%)
Frame = +3
Query: 384 CEECNKIIGIDSKDLSYKDKHWHEACFLCAKC------RVSLVDKQFGSKLDK-IYCGNC 542
CEEC K + +++ H F C KC V + ++ G ++++ YC C
Sbjct: 468 CEECGKTFRANHNLVNHVLTHAASRMFHCVKCGTGFGPSVRALKRKQGMEIEREEYCNLC 527
Query: 543 YDAQFAS-RCDGCGEVF 590
+ +C+ CG F
Sbjct: 528 KPKHTSRFQCETCGREF 544
>SB_43175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = +3
Query: 366 SVFANGCEECNKIIGIDSKDLSYKDKHWHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCY 545
SV + C++C K S+ ++ H + C +C + +F +K +I+ G+
Sbjct: 55 SVKPHKCDKCGKCFNRPSRLKTHLMIHSGQKPHKCDECGKCFTESRFLNKHVRIHTGH-- 112
Query: 546 DAQFASRCDGCGEVF 590
F +CD CG+ F
Sbjct: 113 -KPF--KCDECGKCF 124
>SB_33424| Best HMM Match : zf-B_box (HMM E-Value=2.2e-18)
Length = 270
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +3
Query: 276 HFCCWQCDESLTGQRYVLRDEHPYCIKCYESVFANGCEECNKIIGIDSKDLSYKD 440
H DE +G+ + + PYC K CE C ++I +D + +KD
Sbjct: 72 HHTILSLDEIKSGKLLAM-SKTPYCTKHKGEKLKLFCESCKEVICLDCTVVDHKD 125
>SB_20707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +3
Query: 447 WHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCY 545
WH+ CF C C ++L K + YC Y
Sbjct: 213 WHKGCFKCESCGMTLNMKTYKGYQKLPYCDAHY 245
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +3
Query: 264 WHSGHFCCWQCDESLTGQRYVLRDEHPYC 350
WH G F C C +L + Y + PYC
Sbjct: 213 WHKGCFKCESCGMTLNMKTYKGYQKLPYC 241
>SB_37120| Best HMM Match : EB (HMM E-Value=4.2)
Length = 376
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/65 (24%), Positives = 28/65 (43%)
Frame = -2
Query: 589 NTSPHPSQRLANWAXXXXXXXXXXXLEPNCLSTRETRHLAHKKQASCQCLSLYDRSLESM 410
+T P+Q + + L P + T+ +HL+ K C+C D L+ +
Sbjct: 88 STKARPTQGVQHLPSNHIPTQGAQHLSPKLIPTQGAQHLSPKLMHYCECKEHEDPLLQKI 147
Query: 409 PMILL 395
PM +L
Sbjct: 148 PMGVL 152
>SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)
Length = 604
Score = 27.5 bits (58), Expect = 8.8
Identities = 30/107 (28%), Positives = 42/107 (39%), Gaps = 7/107 (6%)
Frame = +3
Query: 285 CWQCDESLTGQRYVLRDEHPYCIKCYESVFANG------CEECNKIIGIDSKDLSYKDKH 446
C C E R VL H YC C ES+ + C +C + I I +++ K
Sbjct: 17 CSLCLEQYQDPR-VLACLHTYCRHCLESLVEHSQERTVSCPQCREKIVISVEEV----KD 71
Query: 447 WHEACFLCAKCRVSLVDKQFGSKLD-KIYCGNCYDAQFASRCDGCGE 584
L R +D++ +K D I C C + RCD C E
Sbjct: 72 LKVDFMLNDMIRKMSLDQE--NKADISITCETCQNDVATGRCDDCCE 116
>SB_54646| Best HMM Match : WCCH (HMM E-Value=1.3)
Length = 744
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 288 WQCDESLTGQRYVLRDEHPYCIKCYESVFANGCE 389
W +++L Q +V D H +KC +SVF +
Sbjct: 549 WNSEDNLGAQLHVHIDMHAAYLKCEDSVFGGASD 582
>SB_5864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 27.5 bits (58), Expect = 8.8
Identities = 28/114 (24%), Positives = 41/114 (35%)
Frame = +3
Query: 249 AMNKDWHSGHFCCWQCDESLTGQRYVLRDEHPYCIKCYESVFANGCEECNKIIGIDSKDL 428
A + + H F C C++ Y ++H K ++ N C C K SK
Sbjct: 120 AKHMETHKKKFGCDICEKEFVF--YSSLEKHR---KVHQERNPNHCHLCEKEFDTPSKLK 174
Query: 429 SYKDKHWHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCYDAQFASRCDGCGEVF 590
+ KH E + C C KQF D I + C+ CG+ F
Sbjct: 175 VHMRKHTQEKPYECETC-----GKQFRVTSDLIRHKRIHTGCKPFLCEVCGQGF 223
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,862,804
Number of Sequences: 59808
Number of extensions: 271448
Number of successful extensions: 985
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1463691625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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