Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0734
         (611 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5N568 Cluster: Putative uncharacterized protein; n=1; ...    35   1.8  
UniRef50_Q03US3 Cluster: Transcriptional regulator, xre family; ...    34   3.1  
UniRef50_Q8IBP7 Cluster: Putative uncharacterized protein MAL7P1...    33   5.3  

>UniRef50_A5N568 Cluster: Putative uncharacterized protein; n=1;
           Clostridium kluyveri DSM 555|Rep: Putative
           uncharacterized protein - Clostridium kluyveri DSM 555
          Length = 401

 Score = 34.7 bits (76), Expect = 1.8
 Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
 Frame = +1

Query: 184 SSNPNYFYGGEWKNK*R-KIMFTILNN*KIIALTVNMLYYILMAPASTLQFNNDLKKYPT 360
           +S P YFY    K   R K+MF+ LN   I  + +N ++  L +  + + F  D      
Sbjct: 162 NSYPKYFYNSSEKLTFRNKLMFSKLNQKNIKNINMNEVF--LKSNENNIYFKTDHHYNFN 219

Query: 361 GLVLYVLLT*NK*SDQLNHLKN*LTVN-TSICVHFLPTTYVGTRSSNLYE 507
           G ++      NK  ++  H++   T+      V  L  T++G+R++ LYE
Sbjct: 220 GALMVYQAIINKALEE-EHIRTLSTLKYNDFKVITLNNTFIGSRNNQLYE 268


>UniRef50_Q03US3 Cluster: Transcriptional regulator, xre family;
           n=1; Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293|Rep: Transcriptional regulator, xre family -
           Leuconostoc mesenteroides subsp. mesenteroides (strain
           ATCC 8293 /NCDO 523)
          Length = 183

 Score = 33.9 bits (74), Expect = 3.1
 Identities = 24/72 (33%), Positives = 39/72 (54%)
 Frame = -1

Query: 296 YNILTVNAIIFQLFKIVNIIFLHLFFHSPP*K*LGLDEILGIRLILIVFLKIIYILSS*I 117
           Y I+T++ I   +   +  +FL LF+ S     + ++  L   L + +F+ IIYIL+  I
Sbjct: 82  YRIVTISLISAIIVGTIGYLFLKLFYSS---NMILIESNLSGYLSIPMFILIIYILTK-I 137

Query: 116 NYHELTIILKIK 81
           N+H L  IL  K
Sbjct: 138 NWHSLISILNKK 149


>UniRef50_Q8IBP7 Cluster: Putative uncharacterized protein
           MAL7P1.106; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein MAL7P1.106 - Plasmodium
           falciparum (isolate 3D7)
          Length = 130

 Score = 33.1 bits (72), Expect = 5.3
 Identities = 21/77 (27%), Positives = 38/77 (49%)
 Frame = +1

Query: 148 KNTIKISLIPKISSNPNYFYGGEWKNK*RKIMFTILNN*KIIALTVNMLYYILMAPASTL 327
           K+ I+ SL+  I S   Y++   +K +   I+   LNN  +++ T+   Y+++      L
Sbjct: 41  KSRIRFSLVILIISILMYYF---YKYRNSNIIIETLNNVPLVSFTIIFFYFVIKYDYKNL 97

Query: 328 QFNNDLKKYPTGLVLYV 378
             + DL K   G  LY+
Sbjct: 98  FKSKDLNKTLKGFNLYL 114


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 517,112,258
Number of Sequences: 1657284
Number of extensions: 9276626
Number of successful extensions: 14952
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14948
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43977329078
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)