Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0734
         (611 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.7  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   8.2  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   8.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.2  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 426  LANC*HKYLCTLPSYNVCRYTVVKLI*KAQLI 521
            L NC + +LC    Y       +KL+ KA +I
Sbjct: 1128 LLNCVYLFLCGFCVYEFASDERIKLVIKAIII 1159


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/35 (22%), Positives = 17/35 (48%)
 Frame = +1

Query: 403 DQLNHLKN*LTVNTSICVHFLPTTYVGTRSSNLYE 507
           + +  LK+   ++   C H +   ++G +  N YE
Sbjct: 1   EMMEFLKSVFRLDQDQCSHRIVREHLGLKHDNYYE 35


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/35 (22%), Positives = 17/35 (48%)
 Frame = +1

Query: 403 DQLNHLKN*LTVNTSICVHFLPTTYVGTRSSNLYE 507
           + +  LK+   ++   C H +   ++G +  N YE
Sbjct: 315 EMMEFLKSVFRLDQDQCSHRIVREHLGLKHDNYYE 349


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/35 (22%), Positives = 17/35 (48%)
 Frame = +1

Query: 403 DQLNHLKN*LTVNTSICVHFLPTTYVGTRSSNLYE 507
           + +  LK+   ++   C H +   ++G +  N YE
Sbjct: 548 EMMEFLKSVFRLDQDQCSHRIVREHLGLKHDNYYE 582


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/35 (22%), Positives = 17/35 (48%)
 Frame = +1

Query: 403 DQLNHLKN*LTVNTSICVHFLPTTYVGTRSSNLYE 507
           + +  LK+   ++   C H +   ++G +  N YE
Sbjct: 548 EMMEFLKSVFRLDQDQCSHRIVREHLGLKHDNYYE 582


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,466
Number of Sequences: 336
Number of extensions: 2886
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)