Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0731
         (421 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   2.8  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   3.7  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    20   8.5  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    20   8.5  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 345 CLLNILLYL*IRHWQQWHRK 404
           C L +L Y+  +H+  W  K
Sbjct: 8   CFLLLLYYIYSKHYSYWQSK 27


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +3

Query: 27  VLHYRSSLIVFERISFFGGNTGSEAVYELFHFD 125
           VL   S  +     +FFG   G E + +L  FD
Sbjct: 164 VLKSDSLAVRLSAANFFGARHGLETLNQLIWFD 196


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = -2

Query: 249 FCHLHNLLLYFIFFHL 202
           FC L+ +LL+F+ ++L
Sbjct: 174 FCVLYVVLLHFLTYNL 189


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = -2

Query: 249 FCHLHNLLLYFIFFHL 202
           FC L+ +LL+F+ ++L
Sbjct: 174 FCVLYVVLLHFLTYNL 189


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,517
Number of Sequences: 336
Number of extensions: 1715
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9279512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)