Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0731
         (421 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g23110.1 68416.m02913 disease resistance family protein conta...    28   2.2  
At5g24010.1 68418.m02821 protein kinase family protein contains ...    27   5.2  
At5g19740.1 68418.m02347 peptidase M28 family protein ileal pept...    27   5.2  
At4g32270.1 68417.m04591 UDP-sugar transporter-related contains ...    27   6.8  

>At3g23110.1 68416.m02913 disease resistance family protein contains
           leucine rich-repeat (LRR) domains Pfam:PF00560,
           INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon
           pimpinellifolium] gi|1184077|gb|AAC15780
          Length = 835

 Score = 28.3 bits (60), Expect = 2.2
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -2

Query: 417 WQSTSCDAIVASVEFINIIKYLTN 346
           W+  +CDA +  V  +N++ Y+ N
Sbjct: 76  WEGVTCDATLGEVISLNLVSYIAN 99


>At5g24010.1 68418.m02821 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 824

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 296 VLLTYKFHFISLYSSKMFVKYFIIFINSTLA 388
           VL   + HF  + SS +   YF +FIN  LA
Sbjct: 303 VLHLVRLHFCDIVSSSLNQLYFNVFINEYLA 333


>At5g19740.1 68418.m02347 peptidase M28 family protein ileal
           peptidase I100 - Rattus norvegicus, EMBL:AF009921;
           contains Pfam profiles PF04389: Peptidase family M28,
           PF02225: PA domain
          Length = 681

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +2

Query: 296 VLLTYKFHFISLYSSKMFVKYFIIFINSTLATMASQEVDCHT 421
           V+    + F SL+SS     Y  +FI+++ +  AS  ++ HT
Sbjct: 10  VIAALSYSFFSLFSSPPKSHYHELFISTSFSDNASVALNLHT 51


>At4g32270.1 68417.m04591 UDP-sugar transporter-related contains
           weak similarity to Swiss-Prot:Q95YI5 UDP-sugar
           transporter UST74c [Drosophila melanogaster]
          Length = 364

 Score = 26.6 bits (56), Expect = 6.8
 Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
 Frame = +2

Query: 266 KLVFHIIP*SVLLTYKFHFISLYSSKM--FVKYFIIFINSTLATMASQEV 409
           K +FH +P  + + Y  + + L  S +  FV  + IF+N+TL +  +Q +
Sbjct: 96  KTLFHTLP--LAIAYLLYMVVLLCSCVLAFVLNYCIFLNTTLNSALTQTI 143


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,589,828
Number of Sequences: 28952
Number of extensions: 122862
Number of successful extensions: 247
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 247
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 645327280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)