Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0730
         (527 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015282-1|AAT94511.1| 1250|Drosophila melanogaster LD04601p pro...    31   0.97 
AF255733-1|AAF71288.1| 1250|Drosophila melanogaster DNA topoisom...    31   0.97 
AE014134-3114|AAF53813.2| 1250|Drosophila melanogaster CG10123-P...    31   0.97 
AY069384-1|AAL39529.1|  469|Drosophila melanogaster LD09414p pro...    28   9.0  
AE014297-1917|AAF55111.1|  469|Drosophila melanogaster CG7265-PA...    28   9.0  

>BT015282-1|AAT94511.1| 1250|Drosophila melanogaster LD04601p
           protein.
          Length = 1250

 Score = 31.1 bits (67), Expect = 0.97
 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
 Frame = -1

Query: 236 TTELEKFRTKLLKLSVVTYHTVC*KIQTKNIVFFFHHVSLLHNTYFRIAP--DLRTDHR 66
           T E+EK  ++ LKLS     T+  K+ TK  + +    +   +  F +AP  +++T HR
Sbjct: 323 TVEMEKLGSRKLKLSAKETMTIAEKLYTKGFISYPRTETNQFSKEFALAPLVEMQTGHR 381


>AF255733-1|AAF71288.1| 1250|Drosophila melanogaster DNA
           topoisomerase III alpha protein.
          Length = 1250

 Score = 31.1 bits (67), Expect = 0.97
 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
 Frame = -1

Query: 236 TTELEKFRTKLLKLSVVTYHTVC*KIQTKNIVFFFHHVSLLHNTYFRIAP--DLRTDHR 66
           T E+EK  ++ LKLS     T+  K+ TK  + +    +   +  F +AP  +++T HR
Sbjct: 323 TVEMEKLGSRKLKLSAKETMTIAEKLYTKGFISYPRTETNQFSKEFALAPLVEMQTGHR 381


>AE014134-3114|AAF53813.2| 1250|Drosophila melanogaster CG10123-PA
           protein.
          Length = 1250

 Score = 31.1 bits (67), Expect = 0.97
 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
 Frame = -1

Query: 236 TTELEKFRTKLLKLSVVTYHTVC*KIQTKNIVFFFHHVSLLHNTYFRIAP--DLRTDHR 66
           T E+EK  ++ LKLS     T+  K+ TK  + +    +   +  F +AP  +++T HR
Sbjct: 323 TVEMEKLGSRKLKLSAKETMTIAEKLYTKGFISYPRTETNQFSKEFALAPLVEMQTGHR 381


>AY069384-1|AAL39529.1|  469|Drosophila melanogaster LD09414p
           protein.
          Length = 469

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = +3

Query: 231 RGKYFHLEKSKSRQHICMLLSTLN 302
           R +YFH+EK K  Q + ++++TL+
Sbjct: 256 RRRYFHIEKCKDAQTLGLIVATLS 279


>AE014297-1917|AAF55111.1|  469|Drosophila melanogaster CG7265-PA
           protein.
          Length = 469

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = +3

Query: 231 RGKYFHLEKSKSRQHICMLLSTLN 302
           R +YFH+EK K  Q + ++++TL+
Sbjct: 256 RRRYFHIEKCKDAQTLGLIVATLS 279


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,680,095
Number of Sequences: 53049
Number of extensions: 412050
Number of successful extensions: 1134
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1134
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1970722560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)