Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0727
         (577 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   2.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.5  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   4.3  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   5.7  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   5.7  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   7.5  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/35 (25%), Positives = 19/35 (54%)
 Frame = +3

Query: 435 SVHCRVSETSSTLNQPIMTPVEMPTKADSEPTVPS 539
           ++H  +  +S+ + +P+  PVE  T+  S    P+
Sbjct: 377 AIHQTLGGSSNEIVEPVPQPVEEVTQKPSSTKAPA 411


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 205 EPGGPPNGSPG 173
           +PG PP+G PG
Sbjct: 228 KPGTPPSGEPG 238


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +3

Query: 477 QPIMTPVEMPTKADSEPTVPSNLE 548
           QP  T    PT+A  +PT  S  +
Sbjct: 402 QPTQTTESEPTQASEQPTESSTTQ 425


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 15 FPQTTSTYTEYENFEELLPST 77
          F Q  +TY  YEN + L P T
Sbjct: 26 FLQEKTTYEYYENNQALPPIT 46


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 15 FPQTTSTYTEYENFEELLPST 77
          F Q  +TY  YEN + L P T
Sbjct: 17 FLQEKTTYEYYENNQALPPIT 37


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +3

Query: 114 PEQATAPLPAPLA 152
           PE   AP PAPLA
Sbjct: 84  PEIPVAPEPAPLA 96



 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 3   RGNAFPQTTSTYTEYENFEELLPSTA 80
           RGN FP+ +S   ++ N +   PST+
Sbjct: 350 RGNGFPKRSSDEQQWRNNQ---PSTS 372


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,513
Number of Sequences: 336
Number of extensions: 2802
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)