Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0727
         (577 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41013-2|AAA82300.1|  557|Caenorhabditis elegans Hypothetical pr...    30   1.0  
Z83120-1|CAB05583.1|  837|Caenorhabditis elegans Hypothetical pr...    29   1.8  
AC026301-9|AAK68890.2|  313|Caenorhabditis elegans Hypothetical ...    29   3.1  
Z69664-8|CAN86924.1| 1287|Caenorhabditis elegans Hypothetical pr...    28   4.1  
Z69664-7|CAA93515.2| 1338|Caenorhabditis elegans Hypothetical pr...    28   4.1  
U23139-1|AAK31493.2|  513|Caenorhabditis elegans Hypothetical pr...    28   4.1  
Z14092-5|CAD45600.1|  816|Caenorhabditis elegans Hypothetical pr...    28   5.5  
AF099920-1|AAZ91353.1|   69|Caenorhabditis elegans Hypothetical ...    27   7.2  
Z49909-5|CAD59140.1|  594|Caenorhabditis elegans Hypothetical pr...    27   9.5  
Z49909-4|CAA90108.1|  876|Caenorhabditis elegans Hypothetical pr...    27   9.5  
AY303577-1|AAP57299.1|  876|Caenorhabditis elegans cell death-re...    27   9.5  
AF039041-8|AAB94189.2|  448|Caenorhabditis elegans Hypothetical ...    27   9.5  
AC006708-10|AAF60430.2| 1250|Caenorhabditis elegans Hypothetical...    27   9.5  

>U41013-2|AAA82300.1|  557|Caenorhabditis elegans Hypothetical
           protein T06C10.3 protein.
          Length = 557

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +3

Query: 270 ENNQLVPMAVEPLQVIAPQPERRDILEAALANSDVFHADTPRDD 401
           ++N +V  +VE L ++ P+ E   ILE  L   + +H   PR+D
Sbjct: 112 KSNLIVSASVEKLSIV-PEKEDFSILEKKLREFNFYHGFLPRED 154


>Z83120-1|CAB05583.1|  837|Caenorhabditis elegans Hypothetical
           protein R06A4.2 protein.
          Length = 837

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +3

Query: 21  QTTSTYTEYENFEELLPSTAIAKQVESVVSQPEQATAPLPAPLADSHL 164
           Q+ ST  E  +F+ELLP++   K  +S    P  A      P+  + L
Sbjct: 662 QSDSTIPESSSFDELLPNSCRVKMEKSYSDIPRSAEPVFKVPMIPNRL 709


>AC026301-9|AAK68890.2|  313|Caenorhabditis elegans Hypothetical
           protein Y54F10BM.11 protein.
          Length = 313

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 11/38 (28%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = +3

Query: 210 YLCVED--NGTLTPIDNRPLILENNQLVPMAVEPLQVI 317
           ++C  D  NGT+ P D +  ++E    + +AV+ L+++
Sbjct: 72  HICYMDALNGTMVPYDGQKKLIEGENFMNIAVQDLKIV 109


>Z69664-8|CAN86924.1| 1287|Caenorhabditis elegans Hypothetical
           protein K04D7.5b protein.
          Length = 1287

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +3

Query: 57  EELLPSTAIAKQVESVVSQPEQATAPLPAPLADSHLL 167
           +EL+PST+    +ES+ +Q E +  P P P++D   L
Sbjct: 762 KELMPSTSSIDSLESINNQ-ETSKFPRPLPMSDQPTL 797


>Z69664-7|CAA93515.2| 1338|Caenorhabditis elegans Hypothetical
           protein K04D7.5a protein.
          Length = 1338

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +3

Query: 57  EELLPSTAIAKQVESVVSQPEQATAPLPAPLADSHLL 167
           +EL+PST+    +ES+ +Q E +  P P P++D   L
Sbjct: 762 KELMPSTSSIDSLESINNQ-ETSKFPRPLPMSDQPTL 797


>U23139-1|AAK31493.2|  513|Caenorhabditis elegans Hypothetical
           protein F13H8.5 protein.
          Length = 513

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +3

Query: 90  QVESVVSQPEQATAPLPAPLA-DSHL 164
           Q    V QP+QAT P P P+A  SHL
Sbjct: 351 QTRRPVPQPQQATRPAPRPVAPKSHL 376


>Z14092-5|CAD45600.1|  816|Caenorhabditis elegans Hypothetical
           protein R107.4c protein.
          Length = 816

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = +3

Query: 267 LENNQLVPMAVEPLQVIAPQPERRDILEAALANSDVFHADTPRDDAPD 410
           ++  Q+V     P +   P+PE+  ILE+++         TP    PD
Sbjct: 743 IQETQVVSAESSPNKEQFPKPEQDSILESSIDEGSTSFESTPPSSPPD 790


>AF099920-1|AAZ91353.1|   69|Caenorhabditis elegans Hypothetical
           protein H06H21.11 protein.
          Length = 69

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +3

Query: 306 LQVIAPQPERRDILEAALANSDVFHADTPRDDAPDFRDLNA 428
           LQ   PQ E  +      A++D FH +   DD+ D  D N+
Sbjct: 29  LQSFLPQMEEANRNMPENASADAFHIENVEDDSSDDSDSNS 69


>Z49909-5|CAD59140.1|  594|Caenorhabditis elegans Hypothetical
           protein C14A4.4b protein.
          Length = 594

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = +3

Query: 324 QPERRDILEAALANSDVFHADTPRDDAPDFRDLNANVSVHCRVSETSSTLNQPIMTPVEM 503
           + ER+ + E  L  +   H D P +  P+F     NV     V +  +    P  +P+E 
Sbjct: 417 EAERKKLEEGDLPKTMFSHHDAPINRKPEFDAKLLNVDTLKLVPDDPNKPKDPEPSPME- 475

Query: 504 PTKADSEPTV--PSNLED 551
             ++ SEP +  PS   D
Sbjct: 476 --ESSSEPQIFDPSRFTD 491


>Z49909-4|CAA90108.1|  876|Caenorhabditis elegans Hypothetical
           protein C14A4.4a protein.
          Length = 876

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = +3

Query: 324 QPERRDILEAALANSDVFHADTPRDDAPDFRDLNANVSVHCRVSETSSTLNQPIMTPVEM 503
           + ER+ + E  L  +   H D P +  P+F     NV     V +  +    P  +P+E 
Sbjct: 699 EAERKKLEEGDLPKTMFSHHDAPINRKPEFDAKLLNVDTLKLVPDDPNKPKDPEPSPME- 757

Query: 504 PTKADSEPTV--PSNLED 551
             ++ SEP +  PS   D
Sbjct: 758 --ESSSEPQIFDPSRFTD 773


>AY303577-1|AAP57299.1|  876|Caenorhabditis elegans cell
           death-related nuclease 3 protein.
          Length = 876

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = +3

Query: 324 QPERRDILEAALANSDVFHADTPRDDAPDFRDLNANVSVHCRVSETSSTLNQPIMTPVEM 503
           + ER+ + E  L  +   H D P +  P+F     NV     V +  +    P  +P+E 
Sbjct: 699 EAERKKLEEGDLPKTMFSHHDAPINRKPEFDAKLLNVDTLKLVPDDPNKPKDPEPSPME- 757

Query: 504 PTKADSEPTV--PSNLED 551
             ++ SEP +  PS   D
Sbjct: 758 --ESSSEPQIFDPSRFTD 773


>AF039041-8|AAB94189.2|  448|Caenorhabditis elegans Hypothetical
           protein W03F8.2 protein.
          Length = 448

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +3

Query: 270 ENNQLVPMAVEPLQVIAPQPERRDILEAALANSDVFHADTPRDD 401
           ++N +   +VE + ++ P+ E   ILE  L   + +H   PR+D
Sbjct: 147 KSNIIATASVEKISIV-PEKEDFSILEKKLREFNFYHGFFPRED 189


>AC006708-10|AAF60430.2| 1250|Caenorhabditis elegans Hypothetical
           protein Y110A7A.16 protein.
          Length = 1250

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +3

Query: 225 DNGTLTPIDNRPLILENNQLVPMAVEPL 308
           D  TL   DN+ L L ++ LVP A  PL
Sbjct: 113 DEQTLALADNQTLYLADSSLVPFAERPL 140


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,089,012
Number of Sequences: 27780
Number of extensions: 284690
Number of successful extensions: 994
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)