Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0725
         (539 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    29   0.075
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    29   0.075
AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    23   6.5  
EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            23   8.7  

>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 29.5 bits (63), Expect = 0.075
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +1

Query: 235 KSSRHFQSRHNQADRMAPSAAQEFVKNVRGKPKRHGGGPTQGSQ 366
           + S+H Q +H       P  AQ   +  + KP  H GG T G +
Sbjct: 477 QQSQH-QQQHQHQPGGGPLPAQSAKQRTKSKPAEHAGGSTTGDK 519


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 29.5 bits (63), Expect = 0.075
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +1

Query: 235 KSSRHFQSRHNQADRMAPSAAQEFVKNVRGKPKRHGGGPTQGSQ 366
           + S+H Q +H       P  AQ   +  + KP  H GG T G +
Sbjct: 477 QQSQH-QQQHQHQPGGGPLPAQSAKQRTKSKPAEHAGGSTTGDK 519


>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 14/56 (25%), Positives = 28/56 (50%)
 Frame = -3

Query: 366 LRSLCRASTMTFWFSSYILNKFLSC*RRHSIGLVVPRLKVSRAFWTASAADIVFCL 199
           L +  R+  M  W +  +LN  +S     ++G+ +  + V   F+ A+A   ++CL
Sbjct: 262 LNTSIRSMLMLQWLTC-VLNWSISLIYLTNVGISLQSVTVVVMFFLATAETFLYCL 316


>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 304 FVKNVRGKPKRHGGGPTQGSQTKQNGSHSTRS 399
           F+   +  PK  G GP Q  +  QN ++   S
Sbjct: 178 FLAIAKKLPKNEGAGPQQNIRPTQNETNRQNS 209


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 551,003
Number of Sequences: 2352
Number of extensions: 11311
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 50320221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)