Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0725
         (539 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    24   1.1  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    24   1.1  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    24   1.1  
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    23   2.0  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    22   3.5  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   4.6  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   4.6  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   4.6  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    21   8.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   8.1  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 256 SRHNQADRMAPSAAQEFVKNVRGKPKRH 339
           +RH +AD    S + E   N R  P+ H
Sbjct: 242 TRHREADDAEESVSSETNHNERSTPRSH 269


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 256 SRHNQADRMAPSAAQEFVKNVRGKPKRH 339
           +RH +AD    S + E   N R  P+ H
Sbjct: 242 TRHREADDAEESVSSETNHNERSTPRSH 269


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 256 SRHNQADRMAPSAAQEFVKNVRGKPKRH 339
           +RH +AD    S + E   N R  P+ H
Sbjct: 242 TRHREADDAEESVSSETNHNERSTPRSH 269


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 244 RHFQSRHNQADRM 282
           RHFQ +H Q+D +
Sbjct: 23  RHFQDKHEQSDTL 35


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 464 HPPKGFVNILDEVVIYNDP 520
           +PPKG  +   +V++ N P
Sbjct: 332 NPPKGAADFTAQVIVLNHP 350


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 229 RPKSSRHFQSRHNQADRMAPSAAQEFVKNVRGKPK 333
           RPK  +    +  Q D  AP+A +  V+ V  KP+
Sbjct: 365 RPKLRKDMYEKMVQVDPTAPNAEERRVQGVT-KPR 398


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 229 RPKSSRHFQSRHNQADRMAPSAAQEFVKNVRGKPK 333
           RPK  +    +  Q D  AP+A +  V+ V  KP+
Sbjct: 280 RPKLRKDMYEKMVQVDPTAPNAEERRVQGVT-KPR 313


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 229 RPKSSRHFQSRHNQADRMAPSAAQEFVKNVRGKPK 333
           RPK  +    +  Q D  AP+A +  V+ V  KP+
Sbjct: 599 RPKLRKDMYEKMVQVDPTAPNAEERRVQGVT-KPR 632


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +2

Query: 302 NLLRMYEENQNVMVEALHKDLRRSKMEAILLEVDYLIN 415
           N+L  Y ++  + V AL       KM+ + +EV Y I+
Sbjct: 314 NILLYYRDSLALSVFALILTALLRKMQEMSIEVPYWIS 351


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 398 VDYLINDLRNTLHYLDEWTKPEHP 469
           V+ + N LRN L  +     P+HP
Sbjct: 359 VERMHNKLRNALQTVLAQNHPQHP 382


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,103
Number of Sequences: 438
Number of extensions: 2955
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15336375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)