Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0725
(539 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g34240.2 68417.m04866 aldehyde dehydrogenase (ALDH3) similar ... 73 1e-13
At4g34240.1 68417.m04867 aldehyde dehydrogenase (ALDH3) similar ... 73 1e-13
At1g44170.2 68414.m05102 aldehyde dehydrogenase, putative (ALDH)... 67 8e-12
At1g44170.1 68414.m05101 aldehyde dehydrogenase, putative (ALDH)... 67 8e-12
At4g36250.1 68417.m05156 aldehyde dehydrogenase family protein c... 65 3e-11
At4g16250.1 68417.m02465 phytochrome D (PHYD) nearly identical t... 37 0.010
At3g66658.2 68416.m00781 betaine-aldehyde dehydrogenase, putativ... 33 0.12
At3g66658.1 68416.m00782 betaine-aldehyde dehydrogenase, putativ... 33 0.12
At1g23030.1 68414.m02877 armadillo/beta-catenin repeat family pr... 31 0.49
At4g32160.1 68417.m04574 phox (PX) domain-containing protein con... 31 0.65
At5g51650.1 68418.m06404 hypothetical protein 28 4.6
At5g64030.1 68418.m08039 dehydration-responsive protein-related ... 27 6.1
At5g01590.1 68418.m00074 expressed protein 27 8.0
>At4g34240.2 68417.m04866 aldehyde dehydrogenase (ALDH3) similar to
aldehyde dehydrogenase [Arabidopsis thaliana]
gi|17065876|emb|CAC84903; contains Pfam profile PF00171:
aldehyde dehydrogenase (NAD) family protein; identical
to cDNA aldehyde dehydrogenase (ALDH3 gene) GI:17065875,
aldehyde dehydrogenase [Arabidopsis thaliana]
GI:17065876
Length = 390
Score = 72.9 bits (171), Expect = 1e-13
Identities = 37/107 (34%), Positives = 54/107 (50%)
Frame = +2
Query: 218 AAEAVQKARDTFNRGTTRPIEWRRQQLKNLLRMYEENQNVMVEALHKDLRRSKMEAILLE 397
AA V + R FN G T+ EWR QL+N+ RM +E + + EAL++DL + ++EA L E
Sbjct: 75 AALLVDELRSNFNSGRTKSYEWRISQLQNIARMIDEKEKCITEALYQDLSKPELEAFLAE 134
Query: 398 VDYLINDLRNTLHYLDEWTKPEHPPKGFVNILDEVVIYNDPYGVVLV 538
+ + + L W PE I ++P GVVLV
Sbjct: 135 ISNTKSSCMLAIKELKNWMAPETVKTSVTTFPSSAQIVSEPLGVVLV 181
>At4g34240.1 68417.m04867 aldehyde dehydrogenase (ALDH3) similar to
aldehyde dehydrogenase [Arabidopsis thaliana]
gi|17065876|emb|CAC84903; contains Pfam profile PF00171:
aldehyde dehydrogenase (NAD) family protein; identical
to cDNA aldehyde dehydrogenase (ALDH3 gene) GI:17065875,
aldehyde dehydrogenase [Arabidopsis thaliana]
GI:17065876
Length = 550
Score = 72.9 bits (171), Expect = 1e-13
Identities = 37/107 (34%), Positives = 54/107 (50%)
Frame = +2
Query: 218 AAEAVQKARDTFNRGTTRPIEWRRQQLKNLLRMYEENQNVMVEALHKDLRRSKMEAILLE 397
AA V + R FN G T+ EWR QL+N+ RM +E + + EAL++DL + ++EA L E
Sbjct: 75 AALLVDELRSNFNSGRTKSYEWRISQLQNIARMIDEKEKCITEALYQDLSKPELEAFLAE 134
Query: 398 VDYLINDLRNTLHYLDEWTKPEHPPKGFVNILDEVVIYNDPYGVVLV 538
+ + + L W PE I ++P GVVLV
Sbjct: 135 ISNTKSSCMLAIKELKNWMAPETVKTSVTTFPSSAQIVSEPLGVVLV 181
>At1g44170.2 68414.m05102 aldehyde dehydrogenase, putative (ALDH)
similar to aldehyde dehydrogenase ALDH [Craterostigma
plantagineum] gi|17065918|emb|CAC84900
Length = 484
Score = 66.9 bits (156), Expect = 8e-12
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
Frame = +2
Query: 203 QKTMSAAEA---VQKARDTFNRGTTRPIEWRRQQLKNLLRMYEENQNVMVEALHKDLRRS 373
+K +AEA V + R +F+ G TR EWR QLK L+ + + ++ +V AL DL +
Sbjct: 4 KKVFGSAEASNLVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKP 63
Query: 374 KMEAILLEVDYLINDLRNTLHYLDEWTKPEHPPKGFVNILDEVVIYNDPYGVVLV 538
++E+ + EV L N ++ L L W PE I ++P GVVLV
Sbjct: 64 ELESSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLV 118
>At1g44170.1 68414.m05101 aldehyde dehydrogenase, putative (ALDH)
similar to aldehyde dehydrogenase ALDH [Craterostigma
plantagineum] gi|17065918|emb|CAC84900
Length = 484
Score = 66.9 bits (156), Expect = 8e-12
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
Frame = +2
Query: 203 QKTMSAAEA---VQKARDTFNRGTTRPIEWRRQQLKNLLRMYEENQNVMVEALHKDLRRS 373
+K +AEA V + R +F+ G TR EWR QLK L+ + + ++ +V AL DL +
Sbjct: 4 KKVFGSAEASNLVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKP 63
Query: 374 KMEAILLEVDYLINDLRNTLHYLDEWTKPEHPPKGFVNILDEVVIYNDPYGVVLV 538
++E+ + EV L N ++ L L W PE I ++P GVVLV
Sbjct: 64 ELESSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLV 118
>At4g36250.1 68417.m05156 aldehyde dehydrogenase family protein
contais aldehyde dehydrogenase (NADP) family protein
domain, Pfam:PF00171
Length = 484
Score = 64.9 bits (151), Expect = 3e-11
Identities = 30/105 (28%), Positives = 59/105 (56%)
Frame = +2
Query: 224 EAVQKARDTFNRGTTRPIEWRRQQLKNLLRMYEENQNVMVEALHKDLRRSKMEAILLEVD 403
E++++ R+TF G TR ++WR+ Q+ + M ++N++ + AL +DL + EA E+
Sbjct: 10 ESLREMRETFASGRTRSLKWRKAQIGAIYEMVKDNEDKICNALFQDLGKHSTEAFRDELG 69
Query: 404 YLINDLRNTLHYLDEWTKPEHPPKGFVNILDEVVIYNDPYGVVLV 538
++ ++ LD+W P+H + + + ++PYG VLV
Sbjct: 70 VVLRTATVAINCLDKWAVPKHSKLPLLFYPAKGKVISEPYGTVLV 114
>At4g16250.1 68417.m02465 phytochrome D (PHYD) nearly identical to
SP|P42497 Phytochrome D {Arabidopsis thaliana}
Length = 1164
Score = 36.7 bits (81), Expect = 0.010
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 226 GRPKSSRHFQSRHNQADRMAPSAAQEFVKNVRGKPKRHGGG 348
G SS H +SRH A A S+A + +++ +P+ HGGG
Sbjct: 12 GEAASSGHRRSRHTSAAEQAQSSANKALRSQNQQPQNHGGG 52
>At3g66658.2 68416.m00781 betaine-aldehyde dehydrogenase, putative
similar to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Spinacia oleracea] SWISS-PROT:P17202;
contains non-consensus splice site (GC) at intron 13
Length = 596
Score = 33.1 bits (72), Expect = 0.12
Identities = 22/83 (26%), Positives = 38/83 (45%)
Frame = +2
Query: 284 RRQQLKNLLRMYEENQNVMVEALHKDLRRSKMEAILLEVDYLINDLRNTLHYLDEWTKPE 463
RRQ L+ LL+ E+Q ++ E +D ++ ++A L E+ + L + W KPE
Sbjct: 110 RRQFLRILLKYIIEHQELICEVSSRDTGKTMVDASLGEIMTTCEKITWLLSEGERWLKPE 169
Query: 464 HPPKGFVNILDEVVIYNDPYGVV 532
G + + P GV+
Sbjct: 170 SRSSGRAMLHKVSRVEFHPLGVI 192
>At3g66658.1 68416.m00782 betaine-aldehyde dehydrogenase, putative
similar to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Spinacia oleracea] SWISS-PROT:P17202;
contains non-consensus splice site (GC) at intron 13
Length = 554
Score = 33.1 bits (72), Expect = 0.12
Identities = 22/83 (26%), Positives = 38/83 (45%)
Frame = +2
Query: 284 RRQQLKNLLRMYEENQNVMVEALHKDLRRSKMEAILLEVDYLINDLRNTLHYLDEWTKPE 463
RRQ L+ LL+ E+Q ++ E +D ++ ++A L E+ + L + W KPE
Sbjct: 110 RRQFLRILLKYIIEHQELICEVSSRDTGKTMVDASLGEIMTTCEKITWLLSEGERWLKPE 169
Query: 464 HPPKGFVNILDEVVIYNDPYGVV 532
G + + P GV+
Sbjct: 170 SRSSGRAMLHKVSRVEFHPLGVI 192
>At1g23030.1 68414.m02877 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 612
Score = 31.1 bits (67), Expect = 0.49
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +2
Query: 275 IEWRRQQLKNLLRMYEE-NQNVMVEALHKDLRRSKMEAIL-LEVDYLINDLRNTLHYLDE 448
+E R QL+ ++ Y N N AL + + R ++ ++ + + + TLH+ +E
Sbjct: 133 VELARSQLRRAMQRYGSLNSNKFSSALSEPMERDGFSNVIKIKAEEKLESVSETLHFGEE 192
Query: 449 WTKPEHPP 472
K PP
Sbjct: 193 EEKQSSPP 200
>At4g32160.1 68417.m04574 phox (PX) domain-containing protein
contains Pfam profile PF00787: PX domain
Length = 723
Score = 30.7 bits (66), Expect = 0.65
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Frame = +2
Query: 197 SKQKTMSAAEAVQKARDTFNRGTTRPIEWRRQQLKNLLRMYEE-------NQNVMVEALH 355
S++ S AE ++ + ++ ++ R+QQL++L R YEE + V+V+ +
Sbjct: 484 SREDGSSHAEPTVQSTISEKHVLSKELDARKQQLEDLSRRYEELEAKSKADMKVLVKEV- 542
Query: 356 KDLRRSKMEAILLEVDYLINDLRNTLHYLDEWTK 457
K LRRS +E + E+ + + D N L E K
Sbjct: 543 KSLRRSHVE-LEKELTHSLTDKTNAEKLLQEERK 575
>At5g51650.1 68418.m06404 hypothetical protein
Length = 206
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 287 RQQLKNLLRMYEENQNVMVEALHKDLRRSK 376
+QQLK LLR +E+ + +E L K+ + K
Sbjct: 160 KQQLKKLLREFEKKNDEFIEKLMKEKKLEK 189
>At5g64030.1 68418.m08039 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 829
Score = 27.5 bits (58), Expect = 6.1
Identities = 16/74 (21%), Positives = 29/74 (39%)
Frame = +1
Query: 160 QQYDEWKRESYNIQTKDDVSC*GRPKSSRHFQSRHNQADRMAPSAAQEFVKNVRGKPKRH 339
Q++++ E+ N K D PK + NQ ++ +EF + K +
Sbjct: 74 QKFEDAPVETPNEDKKGDGDA-SLPKEDESSSKQDNQEEKKEEKTKEEFTPSSETKSETE 132
Query: 340 GGGPTQGSQTKQNG 381
GG + +NG
Sbjct: 133 GGEDQKDDSKSENG 146
>At5g01590.1 68418.m00074 expressed protein
Length = 424
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 481 EAFWRMFRLSPLIQIMQSVPQIIDQVVDFE 392
+ +W FR SP++Q M +I D + E
Sbjct: 115 QKWWESFRASPVVQFMTRAEEIADDMNKME 144
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,632,874
Number of Sequences: 28952
Number of extensions: 228883
Number of successful extensions: 686
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1003808112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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