Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0724
         (578 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051962-1|AAK93386.1| 1487|Drosophila melanogaster LD42916p pro...    29   3.4  
AE014134-1458|AAF52639.1| 1487|Drosophila melanogaster CG7806-PA...    29   3.4  
AY094653-1|AAM11006.1|  740|Drosophila melanogaster AT11177p pro...    29   4.5  
AE014297-2729|AAF55715.1|  740|Drosophila melanogaster CG4755-PA...    29   4.5  

>AY051962-1|AAK93386.1| 1487|Drosophila melanogaster LD42916p protein.
          Length = 1487

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -2

Query: 223  PFAWPKRMIQHYKNVRL*SKGHLCPVSAALDLQT 122
            PF WP + +  ++ V+L  + HL P    +  QT
Sbjct: 1231 PFGWPTQGVLSFREVQLSYREHLAPALRGITFQT 1264


>AE014134-1458|AAF52639.1| 1487|Drosophila melanogaster CG7806-PA
            protein.
          Length = 1487

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -2

Query: 223  PFAWPKRMIQHYKNVRL*SKGHLCPVSAALDLQT 122
            PF WP + +  ++ V+L  + HL P    +  QT
Sbjct: 1231 PFGWPTQGVLSFREVQLSYREHLAPALRGITFQT 1264


>AY094653-1|AAM11006.1|  740|Drosophila melanogaster AT11177p
           protein.
          Length = 740

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 23/107 (21%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
 Frame = +1

Query: 4   GEKQTRLRHLRNDINQRREAMAMIDDEEDPFILTGLLFEWFEGLKQPILD----KDDLSI 171
           G   T+LR +++ +  +     +  D +DP ++  +L  +   L +P+L     KD + I
Sbjct: 289 GCASTKLRRMKHALEAQHVKTPLPLDYQDPHVIGSILKLYLRELPEPLLTYNLYKDFIRI 348

Query: 172 IVGHS-----CNVESCVLAMQMEDVMLVEYLLRFVIRLRPLAANKKI 297
              HS       +++ +  +  E+   + YL RF+  ++  +A  K+
Sbjct: 349 AERHSEAERKTEIKAILTKLPKENYANLRYLTRFLSIVQQRSALNKM 395


>AE014297-2729|AAF55715.1|  740|Drosophila melanogaster CG4755-PA
           protein.
          Length = 740

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 23/107 (21%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
 Frame = +1

Query: 4   GEKQTRLRHLRNDINQRREAMAMIDDEEDPFILTGLLFEWFEGLKQPILD----KDDLSI 171
           G   T+LR +++ +  +     +  D +DP ++  +L  +   L +P+L     KD + I
Sbjct: 289 GCASTKLRRMKHALEAQHVKTPLPLDYQDPHVIGSILKLYLRELPEPLLTYNLYKDFIRI 348

Query: 172 IVGHS-----CNVESCVLAMQMEDVMLVEYLLRFVIRLRPLAANKKI 297
              HS       +++ +  +  E+   + YL RF+  ++  +A  K+
Sbjct: 349 AERHSEAERKTEIKAILTKLPKENYANLRYLTRFLSIVQQRSALNKM 395


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,788,695
Number of Sequences: 53049
Number of extensions: 510174
Number of successful extensions: 1216
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1211
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)