Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0724
         (578 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35597-1|CAA84645.1|  654|Caenorhabditis elegans Hypothetical pr...    29   1.8  
AC006722-1|AAK68420.1|  401|Caenorhabditis elegans Hypothetical ...    27   7.3  
AC006645-6|AAF39847.1|  462|Caenorhabditis elegans Hypothetical ...    27   7.3  

>Z35597-1|CAA84645.1|  654|Caenorhabditis elegans Hypothetical
           protein C36E8.1 protein.
          Length = 654

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 12/45 (26%), Positives = 26/45 (57%)
 Frame = +1

Query: 214 MQMEDVMLVEYLLRFVIRLRPLAANKKIEILKRILASLTHQAVTI 348
           +Q E   +  +++  V+R  PL+A   ++ +KR++   T  +VT+
Sbjct: 165 VQNEHFEMAHHIISSVLRCFPLSARALLKCVKRVMPHFTRPSVTV 209


>AC006722-1|AAK68420.1|  401|Caenorhabditis elegans Hypothetical
           protein Y19D10A.7 protein.
          Length = 401

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 16/65 (24%), Positives = 29/65 (44%)
 Frame = +1

Query: 166 SIIVGHSCNVESCVLAMQMEDVMLVEYLLRFVIRLRPLAANKKIEILKRILASLTHQAVT 345
           S+I+  S N+        ++ ++   Y +  +I   P  +N     LKRI  +    A+ 
Sbjct: 270 SLII-RSTNLTHIAFLENLKHILTFNYSVSIIIENNPQFSNLTFPNLKRIYTNSLLTAIM 328

Query: 346 INNKS 360
           +NN S
Sbjct: 329 LNNNS 333


>AC006645-6|AAF39847.1|  462|Caenorhabditis elegans Hypothetical
           protein F56A4.9 protein.
          Length = 462

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 16/65 (24%), Positives = 29/65 (44%)
 Frame = +1

Query: 166 SIIVGHSCNVESCVLAMQMEDVMLVEYLLRFVIRLRPLAANKKIEILKRILASLTHQAVT 345
           S+I+  S N+        ++ ++   Y +  +I   P  +N     LKRI  +    A+ 
Sbjct: 315 SLII-RSTNLTHIAFLENLKHILTFNYSVSIIIENNPQFSNLTFPNLKRIYTNSLLTAIM 373

Query: 346 INNKS 360
           +NN S
Sbjct: 374 LNNNS 378


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,683,146
Number of Sequences: 27780
Number of extensions: 255940
Number of successful extensions: 698
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 698
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)