Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0719
(554 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme Mms2|Schizos... 127 1e-30
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 54 1e-08
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 47 2e-06
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 47 2e-06
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 46 3e-06
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 44 2e-05
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 41 1e-04
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 40 2e-04
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 39 4e-04
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 36 0.004
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 36 0.004
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 34 0.012
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 33 0.037
SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit Pst... 31 0.11
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 28 1.1
SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces p... 28 1.1
SPBC215.01 ||SPBC3B9.20|GTPase activating protein|Schizosaccharo... 27 1.9
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 26 3.2
SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 5.7
SPAC12B10.04 |||tubulin-tyrosine ligase |Schizosaccharomyces pom... 25 7.5
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 25 7.5
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 25 7.5
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 25 9.9
>SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme
Mms2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 127 bits (306), Expect = 1e-30
Identities = 52/113 (46%), Positives = 83/113 (73%)
Frame = +1
Query: 214 NFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGT 393
NF+LLEELE+G+KG+G+ + S+GL + DD+TL+ W I+GP + +ENR+YSLKI C
Sbjct: 7 NFKLLEELEKGEKGLGESSCSYGLTNADDITLSDWNATILGPAHSVHENRIYSLKIHCDA 66
Query: 394 RYPDEPPTARFISRIHMNCVNSQTGLVDNRQVPILARWQRDYTIKTVLQEVRR 552
YPD PP F+SRI++ V+ +TG V+ ++ L W+R+Y+++TVL ++++
Sbjct: 67 NYPDAPPIVTFVSRINLPGVDGETGKVNPHKIDCLRHWKREYSMETVLLDLKK 119
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 54.4 bits (125), Expect = 1e-08
Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Frame = +1
Query: 220 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRY 399
R+ +EL Q+ G W + D ++H GM GP TPYE + + IE Y
Sbjct: 8 RIAKELADVQQDKQAGIQVWTINDD----ISHLKGMFRGPEGTPYEGGYFVVDIEIPIDY 63
Query: 400 PDEPPTARFISRIHMNCVNSQTGLVDNRQVPILA-RWQRDYTIKTVL 537
P PP F ++I+ V+SQTG + + IL +W YT+K+ L
Sbjct: 64 PFRPPKMNFDTKIYHPNVSSQTGAI---CLDILKDQWSPVYTMKSAL 107
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 47.2 bits (107), Expect = 2e-06
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Frame = +1
Query: 220 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRY 399
RL+ + ++ Q+ G +S SD+ M W +IIGP TP+E+ + L + +Y
Sbjct: 8 RLMRDFKRMQQDPPAG-VSASPVSDNVML---WNAVIIGPADTPFEDGTFKLVLSFDEQY 63
Query: 400 PDEPPTARFISRI-HMNCVNSQTGLVDNRQVPILARWQRDYTIKTVLQEVR 549
P++PP +F+S + H N + +D Q RW Y + +L ++
Sbjct: 64 PNKPPLVKFVSTMFHPNVYANGELCLDILQ----NRWSPTYDVAAILTSIQ 110
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 47.2 bits (107), Expect = 2e-06
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +1
Query: 292 DDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRI-HMNCVNSQTG 468
D D L HW G I GP T YE + + + YP PPT F S + H N S
Sbjct: 53 DSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGNI 112
Query: 469 LVDNRQVPILARWQRDYTIKTVL 537
+D + +W Y ++T+L
Sbjct: 113 CLD----ILKDKWSAVYNVQTIL 131
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 46.4 bits (105), Expect = 3e-06
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +1
Query: 307 LTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLVDNRQ 486
L HW I+GP +PY ++ L I T YP +PP F +RI+ +NS +
Sbjct: 30 LFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPNINSNGSIC---- 85
Query: 487 VPILA-RWQRDYTIKTVLQEV 546
+ IL +W TI VL +
Sbjct: 86 LDILRDQWSPALTISKVLLSI 106
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 43.6 bits (98), Expect = 2e-05
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +1
Query: 220 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRY 399
RL +E Q G G + L+ D+ + HW +I GP TPYE + L I Y
Sbjct: 7 RLHKEYASFQAGDISGLLL--LKPVTDVDMFHWKAVIEGPTETPYEGGQWVLDIHVHEGY 64
Query: 400 PDEPPTARFISRI-HMN 447
P PP+ F ++I H N
Sbjct: 65 PISPPSVYFQTKIVHPN 81
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 40.7 bits (91), Expect = 1e-04
Identities = 23/69 (33%), Positives = 38/69 (55%)
Frame = +1
Query: 220 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRY 399
RL++E ++ + DG I+ G ++DD W +I GP TP+E +Y ++ + Y
Sbjct: 9 RLMKEYKELTENGPDG-ITAGPSNEDDFFT--WDCLIQGPDGTPFEGGLYPATLKFPSDY 65
Query: 400 PDEPPTARF 426
P PPT +F
Sbjct: 66 PLGPPTLKF 74
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 39.9 bits (89), Expect = 2e-04
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +1
Query: 220 RLLEELEQGQKGVGDGTISWGLESDDD-MTLTHWTGMIIGPPRTPYENRMYSLKIECGTR 396
RL EE +Q ++ G + +S D + L +W I G P+T +E +Y L +
Sbjct: 8 RLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEE 67
Query: 397 YPDEPPTARFISRI-HMNCVNSQT 465
YP PP RF + H N S T
Sbjct: 68 YPTRPPKCRFTPPLFHPNVYPSGT 91
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 39.1 bits (87), Expect = 4e-04
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 223 LLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYP 402
L ++L++ QK G S GL DD ++ W MIIGP T YE + + YP
Sbjct: 10 LRKQLKEIQKNPPQG-FSVGLV--DDKSIFEWEVMIIGPEDTLYEGGFFHATLSFPQDYP 66
Query: 403 DEPPTARFISRI-HMN 447
PP +F + I H N
Sbjct: 67 LMPPKMKFTTEIWHPN 82
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 35.9 bits (79), Expect = 0.004
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +1
Query: 307 LTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFIS 432
+ W +I GPP TPYE Y + YP +PP R I+
Sbjct: 34 ILEWHYIITGPPDTPYEGGQYHGTLIFPPDYPFKPPAIRMIT 75
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 35.9 bits (79), Expect = 0.004
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 298 DMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIH 441
D L HW +GP + Y + ++ YP +PPT F +RI+
Sbjct: 33 DDNLFHWACTALGPSDSVYAGGKFHFSLKFPLDYPFQPPTIEFTTRIY 80
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 34.3 bits (75), Expect = 0.012
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 334 GPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLV 474
GP TPY ++ + +E + YP + P+ F++RI ++ +G V
Sbjct: 38 GPSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSV 84
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 32.7 bits (71), Expect = 0.037
Identities = 18/74 (24%), Positives = 38/74 (51%)
Frame = +1
Query: 220 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRY 399
R+++E+E + G ++ E + L ++ + GP ++ YE + L++ Y
Sbjct: 6 RIIKEIETLTRDPPPGIVAAPTEDN----LRYFKITMEGPQQSAYEGGKFHLELFLPDEY 61
Query: 400 PDEPPTARFISRIH 441
P PP RF+++I+
Sbjct: 62 PMMPPNVRFLTKIY 75
>SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit
Pst2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1075
Score = 31.1 bits (67), Expect = 0.11
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = +1
Query: 205 CHGNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHW----TGMIIGPPRTPYENRMYS 372
C ++RLL E+ G +WG+ +DD ++ W +G I+ +TPYE M
Sbjct: 337 CGPSYRLLPVEERNISCSGRDDFAWGILNDDWVSHPTWASEESGFIV-QRKTPYEEAMTK 395
Query: 373 LKIE 384
L+ E
Sbjct: 396 LEEE 399
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase
kinase Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 27.9 bits (59), Expect = 1.1
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 504 SSKNWDLSIIHKSSLTIDTVHMNPRNKAGCWW 409
S+ NW S+++ SL D + NP+NK W
Sbjct: 291 STVNWVQSVLNLPSLLSDDLMANPKNKERFEW 322
>SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 584
Score = 27.9 bits (59), Expect = 1.1
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -3
Query: 324 SSPMSKSHIIIAFKTPRNGSIA 259
SSPMS+SH+ I+ + PR G A
Sbjct: 439 SSPMSESHVQISSEMPRTGMSA 460
>SPBC215.01 ||SPBC3B9.20|GTPase activating
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 27.1 bits (57), Expect = 1.9
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -3
Query: 144 KLRLIQSSFIA*ALPKQIRFI*SKYGHLQQSN 49
K RL++S F +LP Q+RF+ Y +L+ N
Sbjct: 27 KFRLLESQFALYSLPCQLRFV--HYNNLEDPN 56
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 26.2 bits (55), Expect = 3.2
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = +1
Query: 331 IGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIH 441
I P Y+ + +I+ YP +PP + +++I+
Sbjct: 58 IRPDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIY 94
>SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 412
Score = 25.4 bits (53), Expect = 5.7
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -3
Query: 348 CPWWANNHSSPMSKSHIIIAFKTPRNGSIAHSLLALFKFF*ETKIPVAPQR 196
C W +N S + S + + +++ S A A+F+ ETKIPV P R
Sbjct: 24 CECWDHNLCSSQA-SEMDLIYQSQDTHSCASKQDAVFQLLSETKIPV-PNR 72
>SPAC12B10.04 |||tubulin-tyrosine ligase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 403
Score = 25.0 bits (52), Expect = 7.5
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = -3
Query: 540 LKNCFDGIVTLPSSKNWDLSIIHKSSLTIDTVHMNPRNKAGCWWLIR 400
LKN + S+K + + D V+ NP+ K C ++IR
Sbjct: 27 LKNSGKELTFTNSAKEANFQWAQYEDIDFDEVYKNPKTKLCCSYVIR 73
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.0 bits (52), Expect = 7.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -2
Query: 334 Q*SFQSNE*ESYHHRFQDPKKWFHRPLPFGLVQVLLRDENSRGTTTPDD 188
Q S QS++ + Q P K FHRP P L + + R + T+ D+
Sbjct: 785 QMSRQSSQPSTVSTILQIPDKKFHRPFPRHLHRYVGRSASESLTSEKDE 833
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.0 bits (52), Expect = 7.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 287 SRPQEMVPSPTPFWPCSSSSKRRKFPWHHN 198
S P MV SPT + CS++ + FP H+
Sbjct: 111 SHPSYMVQSPTSYHACSNN--QSPFPHSHH 138
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 24.6 bits (51), Expect = 9.9
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 274 KWFHRPLPFGLVQVLLRDEN 215
K F RP+P L+Q+ L D+N
Sbjct: 890 KVFQRPIPLLLLQLFLVDDN 909
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,374,549
Number of Sequences: 5004
Number of extensions: 49628
Number of successful extensions: 139
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 139
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 231978230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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