Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0717
(601 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 144 4e-35
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 142 2e-34
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 140 8e-34
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 61 5e-10
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 56 5e-10
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 61 6e-10
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 60 1e-09
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 57 8e-09
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 56 2e-08
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 54 1e-07
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 53 1e-07
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 53 1e-07
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 53 2e-07
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 53 2e-07
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 53 2e-07
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 50 9e-07
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 50 9e-07
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 50 9e-07
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 50 9e-07
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 50 2e-06
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 49 2e-06
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 49 2e-06
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 48 4e-06
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 48 4e-06
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 48 6e-06
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 48 6e-06
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 48 6e-06
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 48 6e-06
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 47 8e-06
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 47 1e-05
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 46 1e-05
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 46 2e-05
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 46 2e-05
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 46 3e-05
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 46 3e-05
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 46 3e-05
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 46 3e-05
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 45 3e-05
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 45 3e-05
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 45 4e-05
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 45 4e-05
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 45 4e-05
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 44 1e-04
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 43 1e-04
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 43 1e-04
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 43 1e-04
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 43 1e-04
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 42 3e-04
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 42 3e-04
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 42 4e-04
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 42 4e-04
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 41 7e-04
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 40 0.001
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 40 0.001
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 40 0.002
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 39 0.002
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 39 0.002
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 39 0.002
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 39 0.002
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 39 0.003
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 39 0.003
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 38 0.004
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 38 0.004
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 38 0.004
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 38 0.004
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 38 0.005
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 38 0.005
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 38 0.007
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 37 0.009
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 37 0.009
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 37 0.009
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 37 0.012
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 36 0.015
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 36 0.015
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 36 0.015
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 36 0.015
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 36 0.015
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 36 0.015
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 36 0.015
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 36 0.015
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 36 0.015
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 36 0.020
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 36 0.020
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 36 0.020
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 36 0.020
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 36 0.020
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 36 0.020
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 36 0.020
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 36 0.027
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 36 0.027
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 36 0.027
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 36 0.027
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 36 0.027
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 36 0.027
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 35 0.036
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 35 0.036
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 35 0.036
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 35 0.036
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 35 0.036
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 35 0.047
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 35 0.047
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 35 0.047
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 34 0.063
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 34 0.063
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 34 0.063
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 34 0.063
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 34 0.063
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 34 0.063
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 34 0.063
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 34 0.063
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 32 0.073
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 34 0.083
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 34 0.083
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 34 0.083
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 34 0.083
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 34 0.083
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 34 0.083
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 34 0.083
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 33 0.11
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 33 0.14
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 33 0.14
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 33 0.14
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 33 0.14
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 33 0.19
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 32 0.25
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 32 0.25
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 32 0.25
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 32 0.25
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 32 0.25
At5g58760.1 68418.m07360 transducin family protein / WD-40 repea... 32 0.33
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 32 0.33
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 32 0.33
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 32 0.33
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 32 0.33
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 32 0.33
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 31 0.37
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 31 0.44
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 31 0.44
At1g17720.2 68414.m02194 serine/threonine protein phosphatase 2A... 31 0.44
At1g17720.1 68414.m02193 serine/threonine protein phosphatase 2A... 31 0.44
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 31 0.58
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 31 0.58
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 31 0.58
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 31 0.58
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 31 0.77
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 31 0.77
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 31 0.77
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 31 0.77
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 30 1.0
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 30 1.0
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 30 1.0
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 30 1.0
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 30 1.3
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 30 1.3
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 29 1.8
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 29 1.8
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 29 1.8
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 29 1.8
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 29 1.8
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 29 1.8
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 29 1.8
At4g03970.1 68417.m00561 Ulp1 protease family protein contains P... 29 2.4
At2g43945.1 68415.m05462 expressed protein 29 2.4
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 29 2.4
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 29 2.4
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 29 3.1
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 29 3.1
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 29 3.1
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 29 3.1
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 29 3.1
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 29 3.1
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 29 3.1
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 29 3.1
At5g60050.1 68418.m07530 PRLI-interacting factor-related contain... 28 4.1
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 28 4.1
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 28 4.1
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 28 4.1
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 28 4.1
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 28 4.1
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 28 4.1
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 28 4.1
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 28 4.1
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 28 5.4
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 28 5.4
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 27 7.2
At3g02260.1 68416.m00207 auxin transport protein (BIG) nearly id... 27 7.2
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 27 9.5
At5g52260.1 68418.m06486 myb family transcription factor (MYB19)... 27 9.5
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 27 9.5
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 27 9.5
At3g42530.1 68416.m04410 Ulp1 protease family similar to At5g281... 27 9.5
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 27 9.5
At1g44880.1 68414.m05142 Ulp1 protease family protein similar to... 27 9.5
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 144 bits (349), Expect = 4e-35
Identities = 66/106 (62%), Positives = 82/106 (77%)
Frame = +1
Query: 76 MSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 255
M+E L L+GT+R H VT IAT D+I+S+SRDK++I+WKLT+D+ YG+ Q+RL
Sbjct: 1 MAEGLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLT 60
Query: 256 GHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHTK 393
GHSHF+ DVVLSSDG +ALS SWD LRLWDLAAG +TRRF HTK
Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTK 106
Score = 55.6 bits (128), Expect = 2e-08
Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Frame = +1
Query: 37 RFRESSLFKPFSKMSETLKLRGTLRGHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLT 213
R R L+ + T+ G GH WV+ + +P I+S+S DKT+ VW L+
Sbjct: 125 RDRTIKLWNTLGECKYTISEGG--EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLS 182
Query: 214 RDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHTK 393
+ + L GH+ ++S V +S DG+ S D + LWDLA GK E ++
Sbjct: 183 NCKL-----RSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSV 237
Query: 394 V 396
+
Sbjct: 238 I 238
Score = 42.3 bits (95), Expect = 2e-04
Identities = 19/24 (79%), Positives = 23/24 (95%)
Frame = +2
Query: 530 SEDVLSVAFSVDNRQIVSGSRDKT 601
++DVLSVAFS+DNRQIVS SRD+T
Sbjct: 105 TKDVLSVAFSLDNRQIVSASRDRT 128
Score = 41.5 bits (93), Expect = 4e-04
Identities = 25/81 (30%), Positives = 39/81 (48%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 285
L GH+ +V + + LS S D L +W L G+ +R GH+ + V
Sbjct: 59 LTGHSHFVEDVVLSSD-GQFALSGSWDGELRLWDLAA-----GVSTRRFVGHTKDVLSVA 112
Query: 286 LSSDGNYALSASWDKTLRLWD 348
S D +SAS D+T++LW+
Sbjct: 113 FSLDNRQIVSASRDRTIKLWN 133
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 142 bits (344), Expect = 2e-34
Identities = 64/106 (60%), Positives = 82/106 (77%)
Frame = +1
Query: 76 MSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 255
M+E L L+G +R H VT IAT D+I+++SRDK++I+WKLT+D+ +YG+ Q+RL
Sbjct: 1 MAEGLVLKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLT 60
Query: 256 GHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHTK 393
GHSHF+ DVVLSSDG +ALS SWD LRLWDLA G+TTRRF HTK
Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTK 106
Score = 54.0 bits (124), Expect = 7e-08
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +1
Query: 112 GHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 288
GH WV+ + +P I+S+S DKT+ VW L N + + L GHS +++ V +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL----QNCKL-RNSLVGHSGYLNTVAV 201
Query: 289 SSDGNYALSASWDKTLRLWDLAAGK 363
S DG+ S D + LWDLA GK
Sbjct: 202 SPDGSLCASGGKDGVILLWDLAEGK 226
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/90 (26%), Positives = 45/90 (50%)
Frame = +1
Query: 82 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 261
+ KLR +L GH+G++ +A +P + S +D +++W L + Y + + H
Sbjct: 181 QNCKLRNSLVGHSGYLNTVAVSPD-GSLCASGGKDGVILLWDLAEGKKLYSLEAGSII-H 238
Query: 262 SHFISDVVLSSDGNYALSASWDKTLRLWDL 351
S + S Y L A+ + ++R+WDL
Sbjct: 239 S------LCFSPNRYWLCAATENSIRIWDL 262
Score = 42.3 bits (95), Expect = 2e-04
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +1
Query: 166 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYA--LSASWDKTLR 339
I+S+SRD+T+ +W T E Y I + GH ++S V S + +SASWDKT++
Sbjct: 120 IVSASRDRTIKLWN-TLGECKYTISEGD--GHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176
Query: 340 LWDLAAGKTTRRFEDHT 390
+W+L K H+
Sbjct: 177 VWNLQNCKLRNSLVGHS 193
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = +2
Query: 530 SEDVLSVAFSVDNRQIVSGSRDKT 601
++DVLSVAFS DNRQIVS SRD+T
Sbjct: 105 TKDVLSVAFSTDNRQIVSASRDRT 128
Score = 41.5 bits (93), Expect = 4e-04
Identities = 25/81 (30%), Positives = 39/81 (48%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 285
L GH+ +V + + LS S D L +W L E +R GH+ + V
Sbjct: 59 LTGHSHFVEDVVLSSD-GQFALSGSWDGELRLWDLATGETT-----RRFVGHTKDVLSVA 112
Query: 286 LSSDGNYALSASWDKTLRLWD 348
S+D +SAS D+T++LW+
Sbjct: 113 FSTDNRQIVSASRDRTIKLWN 133
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 140 bits (338), Expect = 8e-34
Identities = 62/106 (58%), Positives = 82/106 (77%)
Frame = +1
Query: 76 MSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 255
M+E L L+GT+ H VT IAT D+I++SSRDK++I+WKLT+++ +YG+ Q+R+
Sbjct: 1 MAEGLVLKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMT 60
Query: 256 GHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHTK 393
GHSHF+ DVVLSSDG +ALS SWD LRLWDLA G++TRRF HTK
Sbjct: 61 GHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTK 106
Score = 53.6 bits (123), Expect = 1e-07
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +1
Query: 112 GHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 288
GH WV+ + +P I+S+S DKT+ VW L N + + L GHS +++ V +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL----QNCKL-RNTLAGHSGYLNTVAV 201
Query: 289 SSDGNYALSASWDKTLRLWDLAAGK 363
S DG+ S D + LWDLA GK
Sbjct: 202 SPDGSLCASGGKDGVILLWDLAEGK 226
Score = 45.2 bits (102), Expect = 3e-05
Identities = 25/90 (27%), Positives = 45/90 (50%)
Frame = +1
Query: 82 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 261
+ KLR TL GH+G++ +A +P + S +D +++W L + Y + + H
Sbjct: 181 QNCKLRNTLAGHSGYLNTVAVSPD-GSLCASGGKDGVILLWDLAEGKKLYSLEAGSII-H 238
Query: 262 SHFISDVVLSSDGNYALSASWDKTLRLWDL 351
S + S Y L A+ + ++R+WDL
Sbjct: 239 S------LCFSPNRYWLCAATENSIRIWDL 262
Score = 43.2 bits (97), Expect = 1e-04
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +1
Query: 166 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYA--LSASWDKTLR 339
I+S+SRD+T+ +W T E Y I + GH ++S V S + +SASWDKT++
Sbjct: 120 IVSASRDRTIKLWN-TLGECKYTISEAD--GHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176
Query: 340 LWDLAAGKTTRRFEDHT 390
+W+L K H+
Sbjct: 177 VWNLQNCKLRNTLAGHS 193
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = +2
Query: 530 SEDVLSVAFSVDNRQIVSGSRDKT 601
++DVLSVAFS DNRQIVS SRD+T
Sbjct: 105 TKDVLSVAFSTDNRQIVSASRDRT 128
Score = 41.1 bits (92), Expect = 5e-04
Identities = 24/81 (29%), Positives = 40/81 (49%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 285
+ GH+ +V + + LS S D L +W L E+ +R GH+ + V
Sbjct: 59 MTGHSHFVQDVVLSSD-GQFALSGSWDGELRLWDLATGEST-----RRFVGHTKDVLSVA 112
Query: 286 LSSDGNYALSASWDKTLRLWD 348
S+D +SAS D+T++LW+
Sbjct: 113 FSTDNRQIVSASRDRTIKLWN 133
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 61.3 bits (142), Expect = 5e-10
Identities = 33/96 (34%), Positives = 50/96 (52%)
Frame = +1
Query: 103 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 282
TL HN V+ + + ++ S+S DKT+ + + + P + GH + ISDV
Sbjct: 19 TLTSHNRAVSSVKFSSD-GRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77
Query: 283 VLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHT 390
SSD + +SAS DKTL+LWD+ G + HT
Sbjct: 78 AFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHT 113
Score = 48.8 bits (111), Expect = 3e-06
Identities = 28/93 (30%), Positives = 48/93 (51%)
Frame = +1
Query: 112 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 291
GH ++ +A + I+S+S DKTL +W + G K L GH+++ V +
Sbjct: 69 GHENGISDVAFSSD-ARFIVSASDDKTLKLWDVET-----GSLIKTLIGHTNYAFCVNFN 122
Query: 292 SDGNYALSASWDKTLRLWDLAAGKTTRRFEDHT 390
N +S S+D+T+R+WD+ GK + H+
Sbjct: 123 PQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHS 155
Score = 35.5 bits (78), Expect = 0.027
Identities = 27/101 (26%), Positives = 46/101 (45%)
Frame = +1
Query: 85 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 264
T K L H+ VT + N + +I+SSS D +W D + + +
Sbjct: 144 TGKCLKVLPAHSDPVTAVDFN-RDGSLIVSSSYDGLCRIW----DSGTGHCVKTLIDDEN 198
Query: 265 HFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDH 387
+S V S +G + L + D TLRLW++++ K + + H
Sbjct: 199 PPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGH 239
Score = 35.1 bits (77), Expect = 0.036
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +1
Query: 166 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLW 345
I+S S D + +W+L N+ + QK L GH+ + +V N S S DKT+R+W
Sbjct: 258 IVSGSEDNCVHMWEL----NSKKLLQK-LEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 235 IPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDL 351
+ + L H+ +S V SSDG SAS DKT+R + +
Sbjct: 15 VHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTI 53
Score = 31.5 bits (68), Expect = 0.44
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +1
Query: 166 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH---SHFISDVVLSSDGNYALSASWDKTL 336
IL + D TL +W ++ + K GH + IS ++G +S S D +
Sbjct: 213 ILVGTLDNTLRLWNISSAKF-----LKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCV 267
Query: 337 RLWDLAAGKTTRRFEDHTKV*QN 405
+W+L + K ++ E HT+ N
Sbjct: 268 HMWELNSKKLLQKLEGHTETVMN 290
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 56.4 bits (130), Expect(2) = 5e-10
Identities = 27/77 (35%), Positives = 44/77 (57%)
Frame = +1
Query: 157 PDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSASWDKTL 336
P+ ++S S D T+ +W+ + + P+KRL GH ++ V S DG + SAS+DK++
Sbjct: 329 PERLVSGSDDFTMFLWEPSVSKQ----PKKRLTGHQQLVNHVYFSPDGKWIASASFDKSV 384
Query: 337 RLWDLAAGKTTRRFEDH 387
RLW+ G+ F H
Sbjct: 385 RLWNGITGQFVTVFRGH 401
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/79 (31%), Positives = 41/79 (51%)
Frame = +1
Query: 109 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 288
RGH G V Q++ + ++LS S+D TL +W++ + +P GH+ + V
Sbjct: 399 RGHVGPVYQVSWSAD-SRLLLSGSKDSTLKIWEIRTKKLKQDLP-----GHADEVFAVDW 452
Query: 289 SSDGNYALSASWDKTLRLW 345
S DG +S D+ L+LW
Sbjct: 453 SPDGEKVVSGGKDRVLKLW 471
Score = 37.1 bits (82), Expect = 0.009
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
Frame = +1
Query: 103 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 282
T +GH WV +A +P ++ S S+ + W + E G P L GH +I+ +
Sbjct: 146 TCKGHKNWVLTVAWSPDGKHLV-SGSKSGEICCWNPKKGELE-GSP---LTGHKKWITGI 200
Query: 283 V-----LSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHT 390
LSS +++S D R+WD+ K+ HT
Sbjct: 201 SWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHT 241
Score = 33.1 bits (72), Expect = 0.14
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 256 GHSHFISDVVLSSDGNYALSASWDKTLRLWDL 351
GH+ + V S DG S S D T+RLWDL
Sbjct: 107 GHAEAVLCVSFSPDGKQLASGSGDTTVRLWDL 138
Score = 32.3 bits (70), Expect = 0.25
Identities = 26/94 (27%), Positives = 39/94 (41%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 285
L GH V + +P I S+S DK++ +W G GH + V
Sbjct: 356 LTGHQQLVNHVYFSPD-GKWIASASFDKSVRLWN-----GITGQFVTVFRGHVGPVYQVS 409
Query: 286 LSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDH 387
S+D LS S D TL++W++ K + H
Sbjct: 410 WSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGH 443
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/87 (25%), Positives = 38/87 (43%)
Frame = +1
Query: 103 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 282
T+ GH V ++ +P + S S D T+ +W L + P GH +++ V
Sbjct: 104 TIAGHAEAVLCVSFSPD-GKQLASGSGDTTVRLWDLYTET-----PLFTCKGHKNWVLTV 157
Query: 283 VLSSDGNYALSASWDKTLRLWDLAAGK 363
S DG + +S S + W+ G+
Sbjct: 158 AWSPDGKHLVSGSKSGEICCWNPKKGE 184
Score = 27.5 bits (58), Expect = 7.2
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +1
Query: 163 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYAL-SASWDKTLR 339
+I + S+D T+ +W+ T+ G + L GH H+I+ + LS++ Y L + ++D T R
Sbjct: 254 IIYTGSQDCTIKMWETTQ-----GKLIRELKGHGHWINSLALSTE--YVLRTGAFDHTGR 306
Score = 24.6 bits (51), Expect(2) = 5e-10
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +1
Query: 73 KMSETL--KLRGTLRGHNGWVTQIATNPKY 156
KM ET KL L+GH W+ +A + +Y
Sbjct: 265 KMWETTQGKLIRELKGHGHWINSLALSTEY 294
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 60.9 bits (141), Expect = 6e-10
Identities = 33/95 (34%), Positives = 53/95 (55%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 285
L GH V + NP +I S S D+ + +W++ D N+ + L GH + I D+
Sbjct: 49 LSGHPSAVYTMKFNPA-GTLIASGSHDREIFLWRVHGDCKNFMV----LKGHKNAILDLH 103
Query: 286 LSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHT 390
+SDG+ +SAS DKT+R WD+ GK ++ +H+
Sbjct: 104 WTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHS 138
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
Frame = +1
Query: 103 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 282
TL GH +T ++ +P +L++ D L VW + R K GH H
Sbjct: 217 TLEGHQDTITGMSLSPD-GSYLLTNGMDNKLCVWDM-RPYAPQNRCVKIFEGHQHNFEKN 274
Query: 283 VL----SSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHT 390
+L S DG + S D+ + +WD + +T + HT
Sbjct: 275 LLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHT 314
Score = 36.3 bits (80), Expect = 0.015
Identities = 25/102 (24%), Positives = 42/102 (41%)
Frame = +1
Query: 82 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 261
ET K + H+ +V + P +I+S S D T +W + + P K
Sbjct: 126 ETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDK----- 180
Query: 262 SHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDH 387
+ I+ V S + + D +++WDL G+ T E H
Sbjct: 181 -YQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGH 221
Score = 36.3 bits (80), Expect = 0.015
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +1
Query: 160 DMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLR 339
D I + D + VW L + E L GH I+ + LS DG+Y L+ D L
Sbjct: 193 DKIFTGGVDNDVKVWDLRKGEATM-----TLEGHQDTITGMSLSPDGSYLLTNGMDNKLC 247
Query: 340 LWDL 351
+WD+
Sbjct: 248 VWDM 251
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 59.7 bits (138), Expect = 1e-09
Identities = 32/96 (33%), Positives = 54/96 (56%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 285
L+ HNG + + +P + +SS DKT+ +W + + + + +K L GH ++ D V
Sbjct: 207 LQAHNGHILKCLLSPANKYLATASS-DKTVKIWNV----DGFKL-EKVLTGHQRWVWDCV 260
Query: 286 LSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHTK 393
S DG + ++AS D T RLW + AGK + ++ H K
Sbjct: 261 FSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHHK 296
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +1
Query: 163 MILSSSRDKTLIVWKLTRDENNYGI--PQKRLYGHSHFISDVVLSSDGNYALSASWDKTL 336
M+++++ T VW+L R + P +L H+ I +LS Y +AS DKT+
Sbjct: 176 MVVAANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTV 235
Query: 337 RLWDLAAGKTTRRFEDHTK 393
++W++ K + H +
Sbjct: 236 KIWNVDGFKLEKVLTGHQR 254
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 57.2 bits (132), Expect = 8e-09
Identities = 34/82 (41%), Positives = 48/82 (58%)
Frame = +1
Query: 103 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 282
TL GH ++ + + +++ S+S DKT+I+W T NY + R GHS ISD+
Sbjct: 38 TLEGHTAAISCVKFSND-GNLLASASVDKTMILWSAT----NYSLIH-RYEGHSSGISDL 91
Query: 283 VLSSDGNYALSASWDKTLRLWD 348
SSD +Y SAS D TLR+WD
Sbjct: 92 AWSSDSHYTCSASDDCTLRIWD 113
Score = 46.8 bits (106), Expect = 1e-05
Identities = 29/93 (31%), Positives = 48/93 (51%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 285
LRGH +V + NP ++I+S S D+T+ +W++ G + + HS IS V
Sbjct: 124 LRGHTNFVFCVNFNPP-SNLIVSGSFDETIRIWEVKT-----GKCVRMIKAHSMPISSVH 177
Query: 286 LSSDGNYALSASWDKTLRLWDLAAGKTTRRFED 384
+ DG+ +SAS D + ++WD G + D
Sbjct: 178 FNRDGSLIVSASHDGSCKIWDAKEGTCLKTLID 210
Score = 45.6 bits (103), Expect = 3e-05
Identities = 27/93 (29%), Positives = 48/93 (51%)
Frame = +1
Query: 112 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 291
GH+ ++ +A + S+S D TL +W D + K L GH++F+ V +
Sbjct: 83 GHSSGISDLAWSSD-SHYTCSASDDCTLRIW----DARSPYECLKVLRGHTNFVFCVNFN 137
Query: 292 SDGNYALSASWDKTLRLWDLAAGKTTRRFEDHT 390
N +S S+D+T+R+W++ GK R + H+
Sbjct: 138 PPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHS 170
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/49 (44%), Positives = 27/49 (55%)
Frame = +1
Query: 244 KRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHT 390
K L GH+ IS V S+DGN SAS DKT+ LW R+E H+
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHS 85
Score = 32.7 bits (71), Expect = 0.19
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 292 SDGNYALSASWDKTLRLWDLAAGKTTRRFEDHT 390
++G Y +S S D + LWDL A +R E HT
Sbjct: 268 TNGKYIVSGSEDNCVYLWDLQARNILQRLEGHT 300
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 55.6 bits (128), Expect = 2e-08
Identities = 32/96 (33%), Positives = 51/96 (53%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 285
L+ HN + + +P + +SS DKT+ +W L + + + +K L GH ++ D
Sbjct: 213 LQAHNSHILKCLLSPGNKYLATASS-DKTVKIWNL----DGFKL-EKVLTGHERWVWDCD 266
Query: 286 LSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHTK 393
S DG Y ++AS D T RLW + AGK ++ H K
Sbjct: 267 FSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHRK 302
Score = 36.3 bits (80), Expect = 0.015
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +1
Query: 163 MILSSSRDKTLIVWK--LTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSASWDKTL 336
M+++++ T VW+ R P +L H+ I +LS Y +AS DKT+
Sbjct: 182 MVVAANDRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDKTV 241
Query: 337 RLWDLAAGKTTRRFEDHTK 393
++W+L K + H +
Sbjct: 242 KIWNLDGFKLEKVLTGHER 260
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/96 (30%), Positives = 47/96 (48%)
Frame = +1
Query: 91 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 270
+L T GH V+ I PK ++LS+ D + +W D N G + GH+
Sbjct: 273 RLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIW----DVYNSGKCMRTYMGHAKA 328
Query: 271 ISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRF 378
+ D+ S+DG+ L+A +DK ++ WD G+ F
Sbjct: 329 VRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTF 364
Score = 27.9 bits (59), Expect = 5.4
Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
Frame = +1
Query: 115 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH--SHFISDVVL 288
H + I+ +P + + + S D ++++ TR+ +KR GH + + V
Sbjct: 454 HMHSMPSISVHPN-GNWLAAQSLDNQILIYS-TRERFQLN-KKKRFAGHIVAGYACQVNF 510
Query: 289 SSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHTKV 396
S DG + +S + WD + K R + H V
Sbjct: 511 SPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHNGV 546
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 53.2 bits (122), Expect = 1e-07
Identities = 27/94 (28%), Positives = 46/94 (48%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 285
++GH GWV +A +P + + S D+T+ +W + G+ + L GH + +
Sbjct: 172 IQGHLGWVRSVAFDPSN-EWFCTGSADRTIKIWDVAT-----GVLKLTLTGHIEQVRGLA 225
Query: 286 LSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDH 387
+S+ Y SA DK ++ WDL K R + H
Sbjct: 226 VSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGH 259
Score = 41.9 bits (94), Expect = 3e-04
Identities = 28/104 (26%), Positives = 43/104 (41%)
Frame = +1
Query: 82 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 261
E K+ + GH V +A +P D++L+ RD VW + + L GH
Sbjct: 248 EQNKVIRSYHGHLSGVYCLALHPTL-DVLLTGGRDSVCRVWDIRTKMQIFA-----LSGH 301
Query: 262 SHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHTK 393
+ + V ++ S D T++ WDL GKT H K
Sbjct: 302 DNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKK 345
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 53.2 bits (122), Expect = 1e-07
Identities = 28/94 (29%), Positives = 46/94 (48%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 285
L+GH GWV +A +P + + S D+T+ +W + G+ + L GH + +
Sbjct: 166 LQGHLGWVRSVAFDPSN-EWFCTGSADRTIKIWDVAT-----GVLKLTLTGHIGQVRGLA 219
Query: 286 LSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDH 387
+S+ Y SA DK ++ WDL K R + H
Sbjct: 220 VSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGH 253
Score = 39.1 bits (87), Expect = 0.002
Identities = 26/104 (25%), Positives = 44/104 (42%)
Frame = +1
Query: 82 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 261
E K+ + GH V +A +P D++L+ RD VW + + +P H
Sbjct: 242 EQNKVIRSYHGHLHGVYCLALHPTL-DVVLTGGRDSVCRVWDIRTKMQIFVLP------H 294
Query: 262 SHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHTK 393
+ V+ ++ S D T++ WDL GK+ +H K
Sbjct: 295 DSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKK 338
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 52.8 bits (121), Expect = 2e-07
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Frame = +1
Query: 85 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 264
T+ + L GH G+V+ P +++SS D+T I+W +T + GH+
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHT 204
Query: 265 HFISDVVLS-SDGNYALSASWDKTLRLWDL-AAGKTTRRFEDH 387
+ V +S S+ N+ +S S D T RLWD AA + R F H
Sbjct: 205 ADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGH 247
Score = 36.3 bits (80), Expect = 0.015
Identities = 24/92 (26%), Positives = 41/92 (44%)
Frame = +1
Query: 112 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 291
GH V ++ + P+ +S S D T +W TR + + +GH ++ V
Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWD-TRAASR---AVRTFHGHEGDVNTVKFF 257
Query: 292 SDGNYALSASWDKTLRLWDLAAGKTTRRFEDH 387
DG + S D T RL+D+ G + ++ H
Sbjct: 258 PDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPH 289
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 52.8 bits (121), Expect = 2e-07
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Frame = +1
Query: 85 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 264
T+ + L GH G+V+ P +++SS D+T I+W +T + GH+
Sbjct: 83 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHT 142
Query: 265 HFISDVVLS-SDGNYALSASWDKTLRLWDL-AAGKTTRRFEDH 387
+ V +S S+ N+ +S S D T RLWD AA + R F H
Sbjct: 143 ADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGH 185
Score = 37.5 bits (83), Expect = 0.007
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +1
Query: 112 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN--NYGIPQKRLYGHSHFISDVV 285
G NG VT IA + + + + T VW E + G+ Q H + IS +
Sbjct: 230 GENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQD---SHRNRISCLG 286
Query: 286 LSSDGNYALSASWDKTLRLW 345
LS+DG+ + SWD L++W
Sbjct: 287 LSADGSALCTGSWDSNLKIW 306
Score = 36.3 bits (80), Expect = 0.015
Identities = 24/92 (26%), Positives = 41/92 (44%)
Frame = +1
Query: 112 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 291
GH V ++ + P+ +S S D T +W TR + + +GH ++ V
Sbjct: 140 GHTADVLSVSISGSNPNWFISGSCDSTARLWD-TRAASR---AVRTFHGHEGDVNTVKFF 195
Query: 292 SDGNYALSASWDKTLRLWDLAAGKTTRRFEDH 387
DG + S D T RL+D+ G + ++ H
Sbjct: 196 PDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPH 227
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 52.8 bits (121), Expect = 2e-07
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Frame = +1
Query: 85 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 264
T+ + L GH G+V+ P +++SS D+T I+W +T + GH+
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHT 204
Query: 265 HFISDVVLS-SDGNYALSASWDKTLRLWDL-AAGKTTRRFEDH 387
+ V +S S+ N+ +S S D T RLWD AA + R F H
Sbjct: 205 ADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGH 247
Score = 37.5 bits (83), Expect = 0.007
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +1
Query: 112 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN--NYGIPQKRLYGHSHFISDVV 285
G NG VT IA + + + + T VW E + G+ Q H + IS +
Sbjct: 292 GENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQD---SHRNRISCLG 348
Query: 286 LSSDGNYALSASWDKTLRLW 345
LS+DG+ + SWD L++W
Sbjct: 349 LSADGSALCTGSWDSNLKIW 368
Score = 36.3 bits (80), Expect = 0.015
Identities = 24/92 (26%), Positives = 41/92 (44%)
Frame = +1
Query: 112 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 291
GH V ++ + P+ +S S D T +W TR + + +GH ++ V
Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWD-TRAASR---AVRTFHGHEGDVNTVKFF 257
Query: 292 SDGNYALSASWDKTLRLWDLAAGKTTRRFEDH 387
DG + S D T RL+D+ G + ++ H
Sbjct: 258 PDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPH 289
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 50.4 bits (115), Expect = 9e-07
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Frame = +1
Query: 115 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS- 291
H+ ++ +A +P P +LSSS D + +W EN + Q GHSH++ VV +
Sbjct: 98 HSDYIRCVAVHPTLP-YVLSSSDDMLIKLWDW---ENGWACTQI-FEGHSHYVMQVVFNP 152
Query: 292 SDGNYALSASWDKTLRLWDLAAGKTTRRFEDHTK 393
D N SAS D+T+++W+L + + H K
Sbjct: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK 186
Score = 47.2 bits (107), Expect = 8e-06
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Frame = +1
Query: 112 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 285
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 286 LSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHT 390
D Y ++ S D T ++WD + + HT
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHT 229
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 50.4 bits (115), Expect = 9e-07
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Frame = +1
Query: 115 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS- 291
H+ ++ +A +P P +LSSS D + +W EN + Q GHSH++ VV +
Sbjct: 98 HSDYIRCVAVHPTLP-YVLSSSDDMLIKLWDW---ENGWACTQI-FEGHSHYVMQVVFNP 152
Query: 292 SDGNYALSASWDKTLRLWDLAAGKTTRRFEDHTK 393
D N SAS D+T+++W+L + + H K
Sbjct: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK 186
Score = 47.2 bits (107), Expect = 8e-06
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Frame = +1
Query: 112 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 285
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 286 LSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHT 390
D Y ++ S D T ++WD + + HT
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHT 229
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 50.4 bits (115), Expect = 9e-07
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Frame = +1
Query: 115 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS- 291
H+ ++ +A +P P +LSSS D + +W EN + Q GHSH++ VV +
Sbjct: 98 HSDYIRCVAVHPTLP-YVLSSSDDMLIKLWDW---ENGWACTQI-FEGHSHYVMQVVFNP 152
Query: 292 SDGNYALSASWDKTLRLWDLAAGKTTRRFEDHTK 393
D N SAS D+T+++W+L + + H K
Sbjct: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK 186
Score = 47.2 bits (107), Expect = 8e-06
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Frame = +1
Query: 112 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 285
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 286 LSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHT 390
D Y ++ S D T ++WD + + HT
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHT 229
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 50.4 bits (115), Expect = 9e-07
Identities = 31/102 (30%), Positives = 46/102 (45%)
Frame = +1
Query: 82 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 261
E K+ GH + + +P + + + S S D L VW D G Q GH
Sbjct: 37 EESKMVRAFTGHRSNCSAVEFHP-FGEFLASGSSDTNLRVW----DTRKKGCIQT-YKGH 90
Query: 262 SHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDH 387
+ IS + S DG + +S D +++WDL AGK F+ H
Sbjct: 91 TRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCH 132
Score = 31.9 bits (69), Expect = 0.33
Identities = 23/97 (23%), Positives = 40/97 (41%)
Frame = +1
Query: 103 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 282
+L GH V +A N + ++L+ + + +W L + + GH S V
Sbjct: 2 SLCGHTSPVDSVAFNSEEV-LVLAGASSGVIKLWDLEESKM-----VRAFTGHRSNCSAV 55
Query: 283 VLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHTK 393
G + S S D LR+WD + ++ HT+
Sbjct: 56 EFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTR 92
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/79 (35%), Positives = 42/79 (53%)
Frame = +1
Query: 115 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS 294
H G VT + N K M+ S S+D +I+W + + + RL GH ++D+V
Sbjct: 105 HKGAVTALRYN-KVGSMLASGSKDNDIILWDVVGESGLF-----RLRGHRDQVTDLVFLD 158
Query: 295 DGNYALSASWDKTLRLWDL 351
G +S+S DK LR+WDL
Sbjct: 159 GGKKLVSSSKDKFLRVWDL 177
Score = 34.7 bits (76), Expect = 0.047
Identities = 23/89 (25%), Positives = 43/89 (48%)
Frame = +1
Query: 82 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 261
++LK +L GH V I + ++I++ S+DK L +W L ++G K ++ H
Sbjct: 570 DSLKFYLSLYGHKLPVMCIDISSD-GELIVTGSQDKNLKIWGL-----DFGDCHKSIFAH 623
Query: 262 SHFISDVVLSSDGNYALSASWDKTLRLWD 348
+ V + +Y S D+ ++ WD
Sbjct: 624 GDSVMGVKFVRNTHYLFSIGKDRLVKYWD 652
Score = 34.7 bits (76), Expect = 0.047
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 250 LYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAG 360
LYGH + + +SSDG ++ S DK L++W L G
Sbjct: 578 LYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFG 614
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +1
Query: 250 LYGHSHFISDVVLSSDGNYALSASWDKTLRLWD 348
L GH I + +S+ G++ ++ S D+++R WD
Sbjct: 662 LEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWD 694
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 49.2 bits (112), Expect = 2e-06
Identities = 27/93 (29%), Positives = 44/93 (47%)
Frame = +1
Query: 112 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 291
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ + L G + D
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHLKGVN--CVDYFTG 196
Query: 292 SDGNYALSASWDKTLRLWDLAAGKTTRRFEDHT 390
D Y ++ S D T ++WD + E HT
Sbjct: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229
Score = 44.8 bits (101), Expect = 4e-05
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +1
Query: 115 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS- 291
H ++ +A +P P +LSSS D + +W D + + GHSH++ V +
Sbjct: 98 HADYIRCVAVHPTLP-YVLSSSDDMLIKLW----DWEKGWLCTQIFEGHSHYVMQVTFNP 152
Query: 292 SDGNYALSASWDKTLRLWDLAAGKTTRRFEDHTK 393
D N SAS D+T+++W+L + + H K
Sbjct: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLK 186
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 49.2 bits (112), Expect = 2e-06
Identities = 29/102 (28%), Positives = 47/102 (46%)
Frame = +1
Query: 82 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 261
E K+ GH + + +P + + + S S D L +W + + G Q GH
Sbjct: 88 EEAKMVRAFTGHRSNCSAVEFHP-FGEFLASGSSDANLKIWDIRKK----GCIQT-YKGH 141
Query: 262 SHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDH 387
S IS + + DG + +S D +++WDL AGK F+ H
Sbjct: 142 SRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFH 183
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +1
Query: 250 LYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDH 387
L GH+ + V S L+ + ++LWD+ K R F H
Sbjct: 54 LCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGH 99
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = +1
Query: 256 GHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHTK 393
GH S V G + S S D L++WD+ + ++ H++
Sbjct: 98 GHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSR 143
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 48.4 bits (110), Expect = 4e-06
Identities = 24/77 (31%), Positives = 42/77 (54%)
Frame = +1
Query: 160 DMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLR 339
+M+ S S+D + +W++ G+ +R HS ++ + S DG+ LS S+D+T R
Sbjct: 276 EMLASGSQDGKIKIWRIRT-----GVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTAR 330
Query: 340 LWDLAAGKTTRRFEDHT 390
+ L +GK + F HT
Sbjct: 331 IHGLKSGKLLKEFRGHT 347
Score = 36.3 bits (80), Expect = 0.015
Identities = 22/78 (28%), Positives = 43/78 (55%)
Frame = +1
Query: 115 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS 294
H+ VT ++ + + +LS+S D+T + L G K GH+ +++ + +S
Sbjct: 304 HSQGVTSLSFS-RDGSQLLSTSFDQTARIHGLKS-----GKLLKEFRGHTSYVNHAIFTS 357
Query: 295 DGNYALSASWDKTLRLWD 348
DG+ ++AS D T+++WD
Sbjct: 358 DGSRIITASSDCTVKVWD 375
Score = 28.7 bits (61), Expect = 3.1
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Frame = +1
Query: 166 ILSSSRDKTLIVW-----KLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSASWDK 330
+ SSS D + VW KL +D Y + + H + + S D S S D
Sbjct: 228 LASSSVDGFIEVWDYISGKLKKDLQ-YQADESFMM-HDDPVLCIDFSRDSEMLASGSQDG 285
Query: 331 TLRLWDLAAGKTTRRFEDHTK 393
+++W + G RRF+ H++
Sbjct: 286 KIKIWRIRTGVCIRRFDAHSQ 306
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 48.4 bits (110), Expect = 4e-06
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Frame = +1
Query: 112 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 285
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 286 LSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHT 390
D Y ++ S D T ++WD + E HT
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229
Score = 46.4 bits (105), Expect = 1e-05
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +1
Query: 115 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS- 291
H+ ++ +A +P P +LSSS D + +W E + Q GHSH++ V +
Sbjct: 98 HSDYIRCVAVHPTLP-YVLSSSDDMLIKLWDW---EKGWACTQI-FEGHSHYVMQVTFNP 152
Query: 292 SDGNYALSASWDKTLRLWDLAAGKTTRRFEDHTK 393
D N SAS D+T+++W+L + + H K
Sbjct: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK 186
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +1
Query: 166 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLW 345
+++ S D T VW D Q L GH+H +S V + ++ S D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 47.6 bits (108), Expect = 6e-06
Identities = 31/93 (33%), Positives = 46/93 (49%)
Frame = +1
Query: 109 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 288
+GHN V +P + S S D+T +W + R + P + + GH +SDV
Sbjct: 457 KGHNYPVWDAQFSP-FGHYFASCSHDRTARIWSMDRIQ-----PLRIMAGH---LSDVDW 507
Query: 289 SSDGNYALSASWDKTLRLWDLAAGKTTRRFEDH 387
+ NY + S DKT+RLWD+ G+ R F H
Sbjct: 508 HPNCNYIATGSSDKTVRLWDVQTGECVRIFIGH 540
Score = 43.6 bits (98), Expect = 1e-04
Identities = 28/82 (34%), Positives = 42/82 (51%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 285
L GH+G V +P D +LSSS D T+ +W + N + K GH++ + D
Sbjct: 414 LLGHSGPVYSATFSPP-GDFVLSSSADTTIRLWSTKLNANL--VCYK---GHNYPVWDAQ 467
Query: 286 LSSDGNYALSASWDKTLRLWDL 351
S G+Y S S D+T R+W +
Sbjct: 468 FSPFGHYFASCSHDRTARIWSM 489
Score = 37.5 bits (83), Expect = 0.007
Identities = 23/86 (26%), Positives = 40/86 (46%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 285
LR G ++ + +P + I + S DKT+ +W + E + GH + +
Sbjct: 495 LRIMAGHLSDVDWHPNC-NYIATGSSDKTVRLWDVQTGEC-----VRIFIGHRSMVLSLA 548
Query: 286 LSSDGNYALSASWDKTLRLWDLAAGK 363
+S DG Y S D T+ +WDL+ +
Sbjct: 549 MSPDGRYMASGDEDGTIMMWDLSTAR 574
Score = 35.9 bits (79), Expect = 0.020
Identities = 24/91 (26%), Positives = 41/91 (45%)
Frame = +1
Query: 112 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 291
GH V +A +P M S D T+++W L+ L GH+ + + S
Sbjct: 539 GHRSMVLSLAMSPDGRYMA-SGDEDGTIMMWDLSTARCI-----TPLMGHNSCVWSLSYS 592
Query: 292 SDGNYALSASWDKTLRLWDLAAGKTTRRFED 384
+G+ S S D T++LWD+ + + E+
Sbjct: 593 GEGSLLASGSADCTVKLWDVTSSTKLTKAEE 623
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 47.6 bits (108), Expect = 6e-06
Identities = 26/84 (30%), Positives = 41/84 (48%)
Frame = +1
Query: 100 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISD 279
G + GH V+ +A NP Y I S+S D + +W ++ P GH +
Sbjct: 50 GAMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFP-----GHQGAVRG 104
Query: 280 VVLSSDGNYALSASWDKTLRLWDL 351
+ S+DGN +S D T+RLW++
Sbjct: 105 LTASTDGNVLVSCGTDCTVRLWNV 128
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +1
Query: 256 GHSHFISDVVLSSDGNYA---LSASWDKTLRLWDLAAGKTTRRFEDH 387
GH +S ++ + NY SAS D +RLWD+++ +T +F H
Sbjct: 54 GHRDGVS--CMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGH 98
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 47.6 bits (108), Expect = 6e-06
Identities = 29/94 (30%), Positives = 44/94 (46%)
Frame = +1
Query: 109 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 288
+GH V +A N M++S +K L VW + G +L GH+ + ++L
Sbjct: 210 KGHKESVYALAMNDT-GTMLVSGGTEKVLRVW-----DPRTGSKSMKLRGHTDNVRVLLL 263
Query: 289 SSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHT 390
S G + LS S D +RLWDL + + HT
Sbjct: 264 DSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHT 297
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 47.6 bits (108), Expect = 6e-06
Identities = 29/94 (30%), Positives = 44/94 (46%)
Frame = +1
Query: 109 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 288
+GH V +A N M++S +K L VW + G +L GH+ + ++L
Sbjct: 210 KGHKESVYALAMNDT-GTMLVSGGTEKVLRVW-----DPRTGSKSMKLRGHTDNVRVLLL 263
Query: 289 SSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHT 390
S G + LS S D +RLWDL + + HT
Sbjct: 264 DSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHT 297
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 47.2 bits (107), Expect = 8e-06
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
Frame = +1
Query: 103 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 282
TL GH ++ + + +YP I+S+S D+T+ +W + + L GH+H++
Sbjct: 88 TLLGHLDYIRTVQFHHEYP-WIVSASDDQTIRIWNW-QSRTCVSV----LTGHNHYVMCA 141
Query: 283 VLSSDGNYALSASWDKTLRLWDLAA--GKTTRRFEDHTKV*Q-NS*FC*GVNADYALKII 453
+ +SAS D+T+R+WD+ A KT +D ++ Q NS GV+A +K +
Sbjct: 142 SFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDIMRLTQMNSDLFGGVDA--IVKYV 199
Query: 454 LSAYAR 471
L + R
Sbjct: 200 LEGHDR 205
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/81 (28%), Positives = 43/81 (53%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 285
L GH+ V A +P P +I+S + D+ + +W++ + L GH + +S V+
Sbjct: 200 LEGHDRGVNWAAFHPTLP-LIVSGADDRQVKLWRMNETK---AWEVDTLRGHMNNVSSVM 255
Query: 286 LSSDGNYALSASWDKTLRLWD 348
+ + +S S DK++R+WD
Sbjct: 256 FHAKQDIIVSNSEDKSIRVWD 276
Score = 33.5 bits (73), Expect = 0.11
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +1
Query: 73 KMSETLKLR-GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 216
+M+ET TLRGH V+ + + K D+I+S+S DK++ VW T+
Sbjct: 232 RMNETKAWEVDTLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATK 279
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 46.8 bits (106), Expect = 1e-05
Identities = 27/101 (26%), Positives = 48/101 (47%)
Frame = +1
Query: 88 LKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSH 267
LK R + H+ + +A + ++ + S D+T +W+L + L GH
Sbjct: 489 LKTRSVVAAHDKDINSVAV-ARNDSLVCTGSEDRTASIWRLPDL-----VHVVTLKGHKR 542
Query: 268 FISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHT 390
I V S+ ++AS DKT+++W ++ G + FE HT
Sbjct: 543 RIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHT 583
Score = 45.6 bits (103), Expect = 3e-05
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +1
Query: 109 RGHNGWVTQIATNP-KYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 285
RGH G V+ I +P ++++S S D T+ VW L +N + H ++ +
Sbjct: 141 RGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNA-KNTEKKCLAIMEKHFSAVTSIA 199
Query: 286 LSSDGNYALSASWDKTLRLWDL 351
LS DG SA DK + LWDL
Sbjct: 200 LSEDGLTLFSAGRDKVVNLWDL 221
Score = 36.3 bits (80), Expect = 0.015
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Frame = +1
Query: 100 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL--TRDENNYGIPQKR---LYGHS 264
G GHNG + +A K +S S D+TL VW L +++ I K + H
Sbjct: 440 GVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHD 499
Query: 265 HFISDVVLSSDGNYALSASWDKTLRLWDL 351
I+ V ++ + + + S D+T +W L
Sbjct: 500 KDINSVAVARNDSLVCTGSEDRTASIWRL 528
Score = 35.9 bits (79), Expect = 0.020
Identities = 21/95 (22%), Positives = 43/95 (45%)
Frame = +1
Query: 103 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 282
TL+GH + + + ++++S DKT+ +W ++ G K GH+ +
Sbjct: 536 TLKGHKRRIFSVEFST-VDQCVMTASGDKTVKIWAISD-----GSCLKTFEGHTSSVLRA 589
Query: 283 VLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDH 387
+DG +S D L+LW++ + ++ H
Sbjct: 590 SFITDGTQFVSCGADGLLKLWNVNTSECIATYDQH 624
Score = 32.7 bits (71), Expect = 0.19
Identities = 23/101 (22%), Positives = 44/101 (43%)
Frame = +1
Query: 94 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFI 273
++ T+ G + +T +A +P ++ S+ + + VW L E I + GH +
Sbjct: 52 VKSTIEGESDTLTALALSPD-DKLLFSAGHSRQIRVWDL---ETLKCIRSWK--GHEGPV 105
Query: 274 SDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHTKV 396
+ + G +A D+ + +WD+ G T F H V
Sbjct: 106 MGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGV 146
Score = 31.5 bits (68), Expect = 0.44
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = +1
Query: 85 TLKLRGTLRGHNGWVTQIAT--NPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 258
T+ L GH V + T + +I++ S+DKT+ +W T ++ G+ G
Sbjct: 390 TMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNAT-SKSCIGVGT----G 444
Query: 259 HSHFISDVVLSSDG-NYALSASWDKTLRLWDL 351
H+ I V + ++ +S S D+TL++W L
Sbjct: 445 HNGDILAVAFAKKSFSFFVSGSGDRTLKVWSL 476
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 46.4 bits (105), Expect = 1e-05
Identities = 30/90 (33%), Positives = 48/90 (53%)
Frame = +1
Query: 91 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 270
++ TL GH+ VT I D++L++S DKT+ +W + D NY + L HS
Sbjct: 255 QILSTLTGHSKKVTSIKFVGD-TDLVLTASSDKTVRIWGCSED-GNY-TSRHTLKDHSAE 311
Query: 271 ISDVVLSSDGNYALSASWDKTLRLWDLAAG 360
+ V + + Y +SAS D T +DL++G
Sbjct: 312 VRAVTVHATNKYFVSASLDSTWCFYDLSSG 341
Score = 32.7 bits (71), Expect = 0.19
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +1
Query: 250 LYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAA-GKTTRR--FEDHT 390
L GHS ++ + D + L+AS DKT+R+W + G T R +DH+
Sbjct: 260 LTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHS 309
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 46.0 bits (104), Expect = 2e-05
Identities = 31/101 (30%), Positives = 50/101 (49%)
Frame = +1
Query: 91 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 270
++ TL GH+ VT + D++L++S DKT+ +W+ D NY L HS
Sbjct: 255 QILSTLTGHSKKVTSVKFVGD-SDLVLTASADKTVRIWRNPGD-GNYACGYT-LNDHSAE 311
Query: 271 ISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHTK 393
+ V + Y +SAS D T +DL++G + D +K
Sbjct: 312 VRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSK 352
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 46.0 bits (104), Expect = 2e-05
Identities = 31/101 (30%), Positives = 50/101 (49%)
Frame = +1
Query: 91 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 270
++ TL GH+ VT + D++L++S DKT+ +W+ D NY L HS
Sbjct: 255 QILSTLTGHSKKVTSVKFVGD-SDLVLTASADKTVRIWRNPGD-GNYACGYT-LNDHSAE 311
Query: 271 ISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHTK 393
+ V + Y +SAS D T +DL++G + D +K
Sbjct: 312 VRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSK 352
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 45.6 bits (103), Expect = 3e-05
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Frame = +1
Query: 106 LRGHNGWVTQIA---TNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY----GHS 264
L GH+G ++ +A +N + ++S+D+TL ++K E+ + R Y GH
Sbjct: 146 LEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHK 205
Query: 265 HFISDVVLSSDGNYALSASWDKTLRLWD 348
+ V GN S+SWD T+ LW+
Sbjct: 206 ASVQSVSAQKSGNMVCSSSWDCTINLWN 233
Score = 40.3 bits (90), Expect = 0.001
Identities = 37/124 (29%), Positives = 53/124 (42%), Gaps = 22/124 (17%)
Frame = +1
Query: 58 FKPFSKMSETLKLRG--TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT------ 213
F P + T K+R LRGH V ++ K +M+ SSS D T+ +W
Sbjct: 183 FDPAESVDSTTKVRAYKILRGHKASVQSVSAQ-KSGNMVCSSSWDCTINLWNTNESTSEG 241
Query: 214 -------RDENNY-------GIPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDL 351
R NN G L GH+ +S VV + + S+SWD ++R WD+
Sbjct: 242 ESVSVKKRKGNNQAEESQSEGEAVTSLVGHTQCVSSVVWP-EHDVIYSSSWDHSVRRWDV 300
Query: 352 AAGK 363
GK
Sbjct: 301 ETGK 304
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +1
Query: 163 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL-SSDGNYALSASWDKTLR 339
+I + D L VW + + P + HS +IS S + LSAS+D +
Sbjct: 327 LIAAGGSDPILRVWDPRKPGTS--APVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIM 384
Query: 340 LWDLAAGKTTR 372
LWDL T+
Sbjct: 385 LWDLRTAVMTK 395
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 45.6 bits (103), Expect = 3e-05
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Frame = +1
Query: 106 LRGHNGWVTQIA---TNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY----GHS 264
L GH+G ++ +A +N + ++S+D+TL ++K E+ + R Y GH
Sbjct: 146 LEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHK 205
Query: 265 HFISDVVLSSDGNYALSASWDKTLRLWD 348
+ V GN S+SWD T+ LW+
Sbjct: 206 ASVQSVSAQKSGNMVCSSSWDCTINLWN 233
Score = 40.3 bits (90), Expect = 0.001
Identities = 37/124 (29%), Positives = 53/124 (42%), Gaps = 22/124 (17%)
Frame = +1
Query: 58 FKPFSKMSETLKLRG--TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT------ 213
F P + T K+R LRGH V ++ K +M+ SSS D T+ +W
Sbjct: 183 FDPAESVDSTTKVRAYKILRGHKASVQSVSAQ-KSGNMVCSSSWDCTINLWNTNESTSEG 241
Query: 214 -------RDENNY-------GIPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDL 351
R NN G L GH+ +S VV + + S+SWD ++R WD+
Sbjct: 242 ESVSVKKRKGNNQAEESQSEGEAVTSLVGHTQCVSSVVWP-EHDVIYSSSWDHSVRRWDV 300
Query: 352 AAGK 363
GK
Sbjct: 301 ETGK 304
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 45.6 bits (103), Expect = 3e-05
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Frame = +1
Query: 112 GHNGW-VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 288
GH GW V + +P +++S +D+ + +W TR G L+GH + + V
Sbjct: 266 GH-GWDVKSVDWHPT-KSLLVSGGKDQLVKLWD-TRS----GRELCSLHGHKNIVLSVKW 318
Query: 289 SSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHTK 393
+ +GN+ L+AS D+ ++L+D+ K + F HTK
Sbjct: 319 NQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTK 353
Score = 37.1 bits (82), Expect = 0.009
Identities = 23/87 (26%), Positives = 38/87 (43%)
Frame = +1
Query: 85 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 264
T+K + RGH VT +A +P + + +S S D ++ W + + IP H
Sbjct: 341 TMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGHENPQIEIPN----AHD 396
Query: 265 HFISDVVLSSDGNYALSASWDKTLRLW 345
+ + D+ G S S D T + W
Sbjct: 397 NSVWDLAWHPIGYLLCSGSNDHTTKFW 423
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 45.6 bits (103), Expect = 3e-05
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +1
Query: 124 WVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKR-LYGHSHFISDVVLSSDG 300
W Q + N KY + SSS+D+T I+W+++ D + I K L GH + ++ S D
Sbjct: 278 WFLQFSHNGKY---LASSSKDQTAIIWEISADGH---ISLKHTLVGHHKPVIAILWSPDD 331
Query: 301 NYALSASWDKTLRLWDLAAGKTTRRFE 381
L+ ++ +R WD+ +G +E
Sbjct: 332 RQVLTCGAEEVIRRWDVDSGDCVHMYE 358
Score = 30.7 bits (66), Expect = 0.77
Identities = 24/73 (32%), Positives = 36/73 (49%)
Frame = +1
Query: 85 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 264
T KL L GH G V ++ +P M+ S+S D T+ +W L R N +K + G S
Sbjct: 520 TGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDR-INQQNQKKKLVQGSS 578
Query: 265 HFISDVVLSSDGN 303
+ V+ +GN
Sbjct: 579 S--NGVIHRCNGN 589
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +1
Query: 154 YPDM--ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSASWD 327
YPD I++ D+++ +W L E Q+ + +SD+ ++ DG + +S D
Sbjct: 370 YPDGQGIIAGMTDRSICMWDLDGREKECWKGQR-----TQKVSDIAMTDDGKWLVSVCKD 424
Query: 328 KTLRLWDLAA 357
+ L+D A
Sbjct: 425 SVISLFDREA 434
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 45.2 bits (102), Expect = 3e-05
Identities = 26/102 (25%), Positives = 46/102 (45%)
Frame = +1
Query: 82 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 261
E K+ TL GH + +P + + S S D L +W + + + GH
Sbjct: 182 EEAKVVRTLTGHRSNCVSVNFHP-FGEFFASGSLDTNLKIWDIRKKGCIHTYK-----GH 235
Query: 262 SHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDH 387
+ ++ + + DG + +S D +++WDL AGK F+ H
Sbjct: 236 TRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSH 277
Score = 33.9 bits (74), Expect = 0.083
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +1
Query: 250 LYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDH 387
LYGHS I V + + + T++LWDL K R H
Sbjct: 148 LYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGH 193
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/97 (19%), Positives = 39/97 (40%)
Frame = +1
Query: 103 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 282
+L GH+ + + + ++ + + T+ +W L + + L GH V
Sbjct: 147 SLYGHSSGIDSVTFDAS-EGLVAAGAASGTIKLWDLEEAK-----VVRTLTGHRSNCVSV 200
Query: 283 VLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHTK 393
G + S S D L++WD+ ++ HT+
Sbjct: 201 NFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTR 237
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 45.2 bits (102), Expect = 3e-05
Identities = 28/97 (28%), Positives = 43/97 (44%)
Frame = +1
Query: 103 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 282
T GH + ++A +P + ++S DKT +W + N G GHS + +
Sbjct: 334 TFEGHLDRLARVAFHPS-GKYLGTTSYDKTWRLWDI-----NTGAELLLQEGHSRSVYGI 387
Query: 283 VLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHTK 393
DG A S D R+WDL G++ F+ H K
Sbjct: 388 AFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIK 424
Score = 32.7 bits (71), Expect = 0.19
Identities = 19/77 (24%), Positives = 39/77 (50%)
Frame = +1
Query: 115 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS 294
H V+Q+ P+ + ++S D + +W RD + K L GH ++ + +++
Sbjct: 464 HANLVSQVKYEPQEGYFLATASYDMKVNIWS-GRDFSLV----KSLAGHESKVASLDITA 518
Query: 295 DGNYALSASWDKTLRLW 345
D + + S D+T++LW
Sbjct: 519 DSSCIATVSHDRTIKLW 535
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 199 VWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRF 378
+W++ + N + L H +DVV S + +AS D+T +LW G + F
Sbjct: 281 LWEMPQVTNTIAV----LKDHKERATDVVFSPVDDCLATASADRTAKLWK-TDGTLLQTF 335
Query: 379 EDH 387
E H
Sbjct: 336 EGH 338
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 44.8 bits (101), Expect = 4e-05
Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +1
Query: 109 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 288
RGH G + ++ + K +LSSS D+T+ +W++ + R++ H F++ V
Sbjct: 360 RGHTGEILDLSWSEK--GFLLSSSVDETVRLWRVGSSDECI-----RVFSHKSFVTCVAF 412
Query: 289 SS-DGNYALSASWDKTLRLWDLA 354
+ D NY +S S D +R+WD++
Sbjct: 413 NPVDDNYFISGSIDGKVRIWDVS 435
Score = 32.3 bits (70), Expect = 0.25
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +1
Query: 238 PQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDH 387
PQ GH+ I D+ S G + LS+S D+T+RLW + + R H
Sbjct: 355 PQHEFRGHTGEILDLSWSEKG-FLLSSSVDETVRLWRVGSSDECIRVFSH 403
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 44.8 bits (101), Expect = 4e-05
Identities = 26/102 (25%), Positives = 46/102 (45%)
Frame = +1
Query: 82 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 261
E K+ TL GH + +P + + S S D L +W + + + GH
Sbjct: 89 EEAKIVRTLTGHRSNCISVDFHP-FGEFFASGSLDTNLKIWDIRKKGCIHTYK-----GH 142
Query: 262 SHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDH 387
+ ++ + + DG + +S D +++WDL AGK F+ H
Sbjct: 143 TRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSH 184
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +1
Query: 250 LYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDH 387
LYGHS I V + + + T++LWDL K R H
Sbjct: 55 LYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGH 100
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/50 (26%), Positives = 21/50 (42%)
Frame = +1
Query: 244 KRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHTK 393
+ L GH V G + S S D L++WD+ ++ HT+
Sbjct: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTR 144
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 44.8 bits (101), Expect = 4e-05
Identities = 26/102 (25%), Positives = 46/102 (45%)
Frame = +1
Query: 82 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 261
E K+ TL GH + +P + + S S D L +W + + + GH
Sbjct: 89 EEAKIVRTLTGHRSNCISVDFHP-FGEFFASGSLDTNLKIWDIRKKGCIHTYK-----GH 142
Query: 262 SHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDH 387
+ ++ + + DG + +S D +++WDL AGK F+ H
Sbjct: 143 TRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSH 184
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +1
Query: 250 LYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDH 387
LYGHS I V + + + T++LWDL K R H
Sbjct: 55 LYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGH 100
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/50 (26%), Positives = 21/50 (42%)
Frame = +1
Query: 244 KRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHTK 393
+ L GH V G + S S D L++WD+ ++ HT+
Sbjct: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTR 144
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/94 (28%), Positives = 43/94 (45%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 285
L+GH G V N + L+ +D+T+ +W R GI K H + DV
Sbjct: 14 LKGHEGAVLAARFNGD-GNYALTCGKDRTIRLWNPHR-----GILIKTYKSHGREVRDVH 67
Query: 286 LSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDH 387
++SD S D+ + WD++ G+ R+F H
Sbjct: 68 VTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGH 101
Score = 31.1 bits (67), Expect = 0.58
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +1
Query: 271 ISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDH 387
++ + +S+DGN L+ D TLRL D G+ + ++ H
Sbjct: 187 VNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGH 225
Score = 30.7 bits (66), Expect = 0.77
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 91 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 207
K+ R H+ VT ++ +PK D +L+SS D T+ VWK
Sbjct: 261 KVLSKFRAHDLVVTSVSYHPK-EDCMLTSSVDGTIRVWK 298
Score = 29.1 bits (62), Expect = 2.4
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +1
Query: 244 KRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWD 348
++ GH ++ V + + +SA +D++LR+WD
Sbjct: 96 RKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWD 130
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +1
Query: 244 KRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTR 372
K+L GHS ++D SS+ Y S+S DKT+R+W+L+ G R
Sbjct: 210 KQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIR 252
Score = 33.1 bits (72), Expect = 0.14
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Frame = +1
Query: 106 LRGHNGWVTQI--ATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISD 279
L GH+ VT ++N +Y I SSS DKT+ VW+L+R G+ + +YG S
Sbjct: 212 LTGHSKDVTDFDFSSNNQY---IASSSLDKTIRVWELSR-----GVCIRVIYGISPQYCI 263
Query: 280 VVLSSDGNYALSASWDKTLRLWDLAAGKTTRR--FED 384
+ N+ + + +K L +++ + G+ ++ FED
Sbjct: 264 RFHPVNNNFLSAGNANKELTVFNFSTGRIIKKLLFED 300
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 43.2 bits (97), Expect = 1e-04
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Frame = +1
Query: 109 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 288
+GH G + ++ + K +LSSS D+T+ +W++ DE R + H++F++ V
Sbjct: 319 KGHIGEILDLSWSEK--GYLLSSSVDETVRLWRVGCDEC------LRTFTHNNFVTCVAF 370
Query: 289 SS-DGNYALSASWDKTLRLWDLAAGKTTRRFEDHTKV 396
+ D NY +S S D +R+WD+ T R D+T +
Sbjct: 371 NPVDDNYFISGSIDGKVRIWDV----TRCRVVDYTDI 403
Score = 32.3 bits (70), Expect = 0.25
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = +1
Query: 169 LSSSRDKTLIVWKLTRDENNYGIPQKRLY---GHSHFISDVVLSSDGNYALSASWDKTLR 339
L S D T +V T + I +K L+ GH I D+ S G Y LS+S D+T+R
Sbjct: 292 LRKSSDSTCVVLPPTI----FSISEKPLHEFKGHIGEILDLSWSEKG-YLLSSSVDETVR 346
Query: 340 LWDLAAGKTTRRF 378
LW + + R F
Sbjct: 347 LWRVGCDECLRTF 359
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +1
Query: 259 HSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFE 381
H I + S DG Y SA D +R+W + + T +E
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYE 257
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 43.2 bits (97), Expect = 1e-04
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Frame = +1
Query: 109 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 288
+GH G + ++ + K +LSSS D+T+ +W++ DE R + H++F++ V
Sbjct: 319 KGHIGEILDLSWSEK--GYLLSSSVDETVRLWRVGCDEC------LRTFTHNNFVTCVAF 370
Query: 289 SS-DGNYALSASWDKTLRLWDLAAGKTTRRFEDHTKV 396
+ D NY +S S D +R+WD+ T R D+T +
Sbjct: 371 NPVDDNYFISGSIDGKVRIWDV----TRCRVVDYTDI 403
Score = 32.3 bits (70), Expect = 0.25
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = +1
Query: 169 LSSSRDKTLIVWKLTRDENNYGIPQKRLY---GHSHFISDVVLSSDGNYALSASWDKTLR 339
L S D T +V T + I +K L+ GH I D+ S G Y LS+S D+T+R
Sbjct: 292 LRKSSDSTCVVLPPTI----FSISEKPLHEFKGHIGEILDLSWSEKG-YLLSSSVDETVR 346
Query: 340 LWDLAAGKTTRRF 378
LW + + R F
Sbjct: 347 LWRVGCDECLRTF 359
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +1
Query: 259 HSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFE 381
H I + S DG Y SA D +R+W + + T +E
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYE 257
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 43.2 bits (97), Expect = 1e-04
Identities = 30/87 (34%), Positives = 50/87 (57%)
Frame = +1
Query: 91 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 270
+LR TL+GH G V I+++ I+S S D ++IVW D+ + ++ L GH
Sbjct: 890 ELRATLKGHTGTVRAISSD---RGKIVSGSDDLSVIVW----DKQTTQLLEE-LKGHDSQ 941
Query: 271 ISDVVLSSDGNYALSASWDKTLRLWDL 351
+S V + S G L+A+ D T+++WD+
Sbjct: 942 VSCVKMLS-GERVLTAAHDGTVKMWDV 967
Score = 29.5 bits (63), Expect = 1.8
Identities = 25/104 (24%), Positives = 48/104 (46%)
Frame = +1
Query: 82 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 261
+T +L L+GH+ V+ + + +L+++ D T+ +W + D + +
Sbjct: 927 QTTQLLEELKGHDSQVSCVKMLSG--ERVLTAAHDGTVKMWDVRTDMCVATVGRCS---- 980
Query: 262 SHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHTK 393
S +S S G A +A D +WD+ +GK + + HTK
Sbjct: 981 SAILSLEYDDSTGILA-AAGRDTVANIWDIRSGKQMHKLKGHTK 1023
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 41.9 bits (94), Expect = 3e-04
Identities = 24/97 (24%), Positives = 51/97 (52%)
Frame = +1
Query: 55 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG 234
+++ F+ SE++ + LRGH V ++ N ++ + RDK++ +W++ +E++
Sbjct: 74 VWENFATDSESVSV---LRGHESEVKSVSWNAS-GSLLATCGRDKSVWIWEIQPEEDDEF 129
Query: 235 IPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLW 345
L GHS + V+ + S S+D T+++W
Sbjct: 130 DTIAVLTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIW 166
Score = 34.3 bits (75), Expect = 0.063
Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ---KRLYGHSHFIS 276
L GH+ V + +P D++ S S D T+ +W ++ +Y Q + GHS +
Sbjct: 135 LTGHSEDVKMVLWHPTM-DVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVW 193
Query: 277 DVVLSSDGNYALSASWDKTLRLW 345
+ ++ G+ ++ S D +++W
Sbjct: 194 SISFNAAGDKMVTCSDDLAVKIW 216
Score = 31.5 bits (68), Expect = 0.44
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 207
L GH V +A NP +I S S DKT+ +W+
Sbjct: 16 LEGHTDRVWNVAWNPAADGVIASCSADKTVRIWE 49
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 41.9 bits (94), Expect = 3e-04
Identities = 25/87 (28%), Positives = 46/87 (52%)
Frame = +1
Query: 103 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 282
TL GH ++ + + + P I+S+S D+T+ +W + + L GH+H++
Sbjct: 88 TLLGHLDYIRTVQFHHENP-WIVSASDDQTIRIWNW-QSRTCISV----LTGHNHYVMCA 141
Query: 283 VLSSDGNYALSASWDKTLRLWDLAAGK 363
+ +SAS D+T+R+WD+ A K
Sbjct: 142 SFHPKEDLVVSASLDQTVRVWDIGALK 168
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/81 (27%), Positives = 43/81 (53%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 285
L GH+ V + +P P +I+S + D+ + +W++ + L GH + +S V+
Sbjct: 200 LEGHDRGVNWASFHPTLP-LIVSGADDRQVKLWRMNETK---AWEVDTLRGHMNNVSSVM 255
Query: 286 LSSDGNYALSASWDKTLRLWD 348
+ + +S S DK++R+WD
Sbjct: 256 FHAKQDIIVSNSEDKSIRVWD 276
Score = 33.5 bits (73), Expect = 0.11
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +1
Query: 73 KMSETLKLR-GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 216
+M+ET TLRGH V+ + + K D+I+S+S DK++ VW T+
Sbjct: 232 RMNETKAWEVDTLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATK 279
Score = 33.1 bits (72), Expect = 0.14
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 282
L GHN +V + +PK D+++S+S D+T+ VW + + P L S SD+
Sbjct: 131 LTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDIGALKKKSASPADDLMRFSQMNSDL 188
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 41.5 bits (93), Expect = 4e-04
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Frame = +1
Query: 91 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 270
KLR L GH+ V I + I +SSRD+T+ VW L + +K L GH+ F
Sbjct: 11 KLRCELHGHDDDVRGICVCND--ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSF 68
Query: 271 ISDVV-LSSDGNY----ALSASWDKTLRLWDLAAGKTTRRFEDH 387
+ + + Y +S S D + +W+L G+ + + H
Sbjct: 69 VGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGH 112
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/77 (28%), Positives = 37/77 (48%)
Frame = +1
Query: 166 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLW 345
++S S D +L +WK + L GH+ + + + D + LSAS D ++RLW
Sbjct: 165 LVSGSSDASLKLWKGKTS-------LQTLSGHTDTVRGLAVMPDLGF-LSASHDGSIRLW 216
Query: 346 DLAAGKTTRRFEDHTKV 396
L +G+ HT +
Sbjct: 217 AL-SGEVLLEMVGHTSL 232
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 41.5 bits (93), Expect = 4e-04
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Frame = +1
Query: 91 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 270
KLR L GH+ V I + I +SSRD+T+ VW L + +K L GH+ F
Sbjct: 11 KLRCELHGHDDDVRGICVCND--ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSF 68
Query: 271 ISDVV-LSSDGNY----ALSASWDKTLRLWDLAAGKTTRRFEDH 387
+ + + Y +S S D + +W+L G+ + + H
Sbjct: 69 VGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGH 112
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/77 (28%), Positives = 37/77 (48%)
Frame = +1
Query: 166 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLW 345
++S S D +L +WK + L GH+ + + + D + LSAS D ++RLW
Sbjct: 165 LVSGSSDASLKLWKGKTS-------LQTLSGHTDTVRGLAVMPDLGF-LSASHDGSIRLW 216
Query: 346 DLAAGKTTRRFEDHTKV 396
L +G+ HT +
Sbjct: 217 AL-SGEVLLEMVGHTSL 232
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 40.7 bits (91), Expect = 7e-04
Identities = 29/102 (28%), Positives = 43/102 (42%)
Frame = +1
Query: 82 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 261
E K TLRGH V + +P M+ S S D T+ +W + G+ L GH
Sbjct: 106 ENWKAVMTLRGHTADVVDLNWSPD-DSMLASGSLDNTVHIWNMRT-----GMCTTVLRGH 159
Query: 262 SHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDH 387
+ V G++ S S DKT+ +W + R + H
Sbjct: 160 LSLVKGVTWDPIGSFIASQSDDKTVIIWRTSDWGMAHRTDGH 201
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/94 (26%), Positives = 44/94 (46%)
Frame = +1
Query: 103 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 282
+L GH VT I + + ++ S+ D + VW + ++ + H+ + DV
Sbjct: 155 SLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKK---KVRAFLHHNAPVKDV 211
Query: 283 VLSSDGNYALSASWDKTLRLWDLAAGKTTRRFED 384
S G LS +D T RL+D+ G T+ F++
Sbjct: 212 KWSKQGLSLLSCGYDCTSRLFDVERGVETQSFKE 245
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/93 (25%), Positives = 46/93 (49%)
Frame = +1
Query: 118 NGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSD 297
+G V Q+ + D++ + ++D +++ W+ N + P L GH+ ++ V L
Sbjct: 227 SGPVGQVYSLVVGTDLLFAGTQDGSILAWRYNAATNCFE-PSASLTGHT--LAVVTLYVG 283
Query: 298 GNYALSASWDKTLRLWDLAAGKTTRRFEDHTKV 396
N S S DKT+++W L + + DH+ V
Sbjct: 284 ANRLYSGSMDKTIKVWSLDNLQCIQTLTDHSSV 316
Score = 37.5 bits (83), Expect = 0.007
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +1
Query: 247 RLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTT 369
+L GH +S + L S + + S D+TLR+WD A+G+ T
Sbjct: 146 QLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCT 186
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 82 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 204
E+ L L GH V+ IA P D + + S+D+TL VW
Sbjct: 139 ESFALLTQLDGHEKLVSGIAL-PSGSDKLYTGSKDETLRVW 178
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 39.5 bits (88), Expect = 0.002
Identities = 28/99 (28%), Positives = 44/99 (44%)
Frame = +1
Query: 91 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 270
KL L GHN V + +P P ++ S S D + + + G + GH+ +
Sbjct: 191 KLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHD-AEGKTLLG----SMSGHTSW 245
Query: 271 ISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDH 387
+ V S DG + S D+T+RLWDL + +H
Sbjct: 246 VLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNH 284
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 79 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 210
+E L G++ GH WV + +P I + S D+T+ +W L
Sbjct: 230 AEGKTLLGSMSGHTSWVLSVDASPD-GGAIATGSSDRTVRLWDL 272
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = +1
Query: 130 TQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYA 309
T + P ++L+ S D+T+ +W+ DE + + GHS ++ + G A
Sbjct: 21 TWVPATEDRPALLLTGSLDETVKLWR--PDELDL---VRTNTGHSLGVAALAAHPSGIIA 75
Query: 310 LSASWDKTLRLWDLAAGKT 366
S+S D +R++D+ T
Sbjct: 76 ASSSIDSFVRVFDVDTNAT 94
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/83 (28%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +1
Query: 109 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 288
RGH G V I+ + + +LS+S DKT+ +WK+ ++ G+ + H+ +++ V
Sbjct: 325 RGHTGEVLDISWSKD--NYLLSASMDKTVRLWKVGSND-CLGV-----FAHNSYVTSVQF 376
Query: 289 SS-DGNYALSASWDKTLRLWDLA 354
+ + NY +S S D +R+W+++
Sbjct: 377 NPVNENYFMSGSIDGKVRIWNIS 399
Score = 37.9 bits (84), Expect = 0.005
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Frame = +1
Query: 229 YGIPQKRLY---GHSHFISDVVLSSDGNYALSASWDKTLRLWDLAA 357
+ I +K LY GH+ + D+ S D NY LSAS DKT+RLW + +
Sbjct: 314 FRIMEKPLYEFRGHTGEVLDISWSKD-NYLLSASMDKTVRLWKVGS 358
Score = 29.1 bits (62), Expect = 2.4
Identities = 23/89 (25%), Positives = 35/89 (39%)
Frame = +1
Query: 259 HSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHTKV*QNS*FC*GVNADY 438
H I + S+DG + S+ D +R+W + K +R D S VN
Sbjct: 220 HDGAILAMKFSNDGKFLASSGEDGIVRVWKVVEDKKSRLRRDCLNEIDPSCMYFEVNDLS 279
Query: 439 ALKIILSAYARQKTSVLCLCEAEDCVCVV 525
LK +L + K + + D CVV
Sbjct: 280 QLKPVLVNEEKPKKTTESFRKTSDSACVV 308
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 39.1 bits (87), Expect = 0.002
Identities = 31/110 (28%), Positives = 51/110 (46%)
Frame = +1
Query: 61 KPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIP 240
KP S + + ++ LRGH V A + +++ S D+ + VW + + Y +
Sbjct: 227 KPSSMVQKMQNIK-RLRGHRNAV-YCAILDRSGRYVITGSDDRLVKVWSM---DTAYCLA 281
Query: 241 QKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHT 390
R GH I+D+ +SS+ + SAS D +R+W L G HT
Sbjct: 282 SCR--GHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHT 329
Score = 33.9 bits (74), Expect = 0.083
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPK--YPDMILSSSRDKTLIVW 204
LRGH G VT IA +P+ P +LSSS D T +W
Sbjct: 325 LRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIW 359
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +1
Query: 256 GHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGK 363
GH+ I+D+ S DG + +S+S D +LR+WD+ K
Sbjct: 555 GHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAK 590
Score = 27.5 bits (58), Expect(2) = 0.44
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +1
Query: 229 YGIPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWD 348
+ + +KR Y H + V S +SA + L++WD
Sbjct: 463 FDMSEKRRYAHDGEVIGVACDSTNTLMISAGYHGDLKVWD 502
Score = 22.6 bits (46), Expect(2) = 0.44
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +1
Query: 325 DKTLRLWDLAAGKTTRRFEDHT 390
D +RL+D+ K R F HT
Sbjct: 536 DFVIRLYDVVTLKMVREFRGHT 557
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +1
Query: 103 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 282
+L+GH + ++ + ++LSSS DKT+ +W + E + +L+ H+ +++ +
Sbjct: 501 SLKGHLDAILDLSWSKS--QLLLSSSMDKTVRLWDI---ETKTCL---KLFAHNDYVTCI 552
Query: 283 VLSS-DGNYALSASWDKTLRLWDL 351
S D NY LS S D +R+W +
Sbjct: 553 QFSPVDENYFLSGSLDAKIRIWSI 576
Score = 30.3 bits (65), Expect = 1.0
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +1
Query: 238 PQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDL 351
P L GH I D+ S LS+S DKT+RLWD+
Sbjct: 498 PVCSLKGHLDAILDLSWSKS-QLLLSSSMDKTVRLWDI 534
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +1
Query: 109 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 288
+GH V +A N + S S D+T +W + + L GH+ + +
Sbjct: 17 QGHKKKVHSVAWNSN-GTKLASGSVDQTARIWNI-EPHGHSKAKDLELKGHTDSVDQLCW 74
Query: 289 S-SDGNYALSASWDKTLRLWDLAAGKTTRRFE 381
+ +AS DK++RLWD +GK T++ E
Sbjct: 75 DPKHSDLVATASGDKSVRLWDARSGKCTQQVE 106
Score = 33.9 bits (74), Expect = 0.083
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 204
L+GH V Q+ +PK+ D++ ++S DK++ +W
Sbjct: 62 LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLW 94
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 38.7 bits (86), Expect = 0.003
Identities = 27/100 (27%), Positives = 45/100 (45%)
Frame = +1
Query: 91 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 270
++R TL GH V + + ++S++ D+T+ +W L + G + S+
Sbjct: 306 RVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHK-----GYCTNTVLFTSN- 359
Query: 271 ISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHT 390
+ + LS DG S D LRLWD+ GK H+
Sbjct: 360 CNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHS 399
Score = 35.9 bits (79), Expect = 0.020
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +1
Query: 166 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLW 345
+ + +D+ + +W + N G K LYG I D+ ++ D ++A+ L +W
Sbjct: 246 LFTGGQDRAVKMW-----DTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVW 300
Query: 346 DLAAGKTTRRFEDHT 390
D+++G+ HT
Sbjct: 301 DVSSGRVRHTLTGHT 315
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 38.3 bits (85), Expect = 0.004
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR--DE------NNYGIPQKRLY-- 255
L H G V Q+ +P + ++ SS D+ L+VW + R DE + P + L+
Sbjct: 301 LSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSH 360
Query: 256 -GHSHFISDVVLSSDGNYALSA-SWDKTLRLWDLA 354
GH ISD + D + +S+ + D +L++W +A
Sbjct: 361 GGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMA 395
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +1
Query: 112 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 291
GH + +A + K ++ S+ D L++W L ++ Q ++ H I+ + +
Sbjct: 216 GHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQ-----MQHQVKVHEREINYLSFN 270
Query: 292 SDGNYAL-SASWDKTLRLWDL 351
+ L +AS D T+ L+DL
Sbjct: 271 PFNEWVLATASSDSTVALFDL 291
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 38.3 bits (85), Expect = 0.004
Identities = 26/92 (28%), Positives = 47/92 (51%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 285
++GH +T + N + D++ S ++D T VW +N + R GHS +
Sbjct: 33 MKGHERPLTFLRYN-RNGDLLFSCAKDHTPTVWFA---DNGERLGTYR--GHSGAVWCCD 86
Query: 286 LSSDGNYALSASWDKTLRLWDLAAGKTTRRFE 381
+S D + ++ S D+T +LWD+ +GK F+
Sbjct: 87 ISRDSSRLITGSADQTAKLWDVKSGKELFTFK 118
Score = 32.3 bits (70), Expect = 0.25
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 256 GHSHFISDVVLSSDGNYALSASWDKTLRLWDL 351
GH I+ + ++D ++ L+ S DKT +LWD+
Sbjct: 218 GHKEAITSLCKAADDSHFLTGSHDKTAKLWDM 249
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 38.3 bits (85), Expect = 0.004
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ---KRLYGHSHFIS 276
L GH V + +P D++ S S D T+ VW D+ Y Q + GHS +
Sbjct: 159 LTGHTQDVKMVQWHPTM-DVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVW 217
Query: 277 DVVLSSDGNYALSASWDKTLRLW 345
+ ++ G+ ++ S D TL++W
Sbjct: 218 SISFNAAGDKMVTCSDDLTLKIW 240
Score = 29.5 bits (63), Expect = 1.8
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = +1
Query: 115 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQK---RLYGHSHFISDVV 285
H V A +P ++ ++S D T +WK NYG + L GH + + V
Sbjct: 73 HTRTVRSCAWSPS-GQLLATASFDGTTGIWK------NYGSEFECISTLEGHENEVKSVS 125
Query: 286 LSSDGNYALSASWDKTLRLWDLAAG 360
++ G+ + S DK++ +W++ G
Sbjct: 126 WNASGSCLATCSRDKSVWIWEVLEG 150
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 38.3 bits (85), Expect = 0.004
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +1
Query: 238 PQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLW 345
P + LYGH+ + D+ S D N LSAS DKT+RLW
Sbjct: 264 PFQELYGHTGDVLDLAWS-DSNLLLSASKDKTVRLW 298
Score = 33.9 bits (74), Expect = 0.083
Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 285
L GH G V +A + +++LS+S+DKT+ +W+ D+ + ++ H+++++ V
Sbjct: 268 LYGHTGDVLDLAWSDS--NLLLSASKDKTVRLWRTGCDQCLH------VFHHNNYVTCVE 319
Query: 286 LS--SDGNYALSASWDKTLRLWDLA 354
+ + N+A S S D R+W L+
Sbjct: 320 FNPVNKNNFA-SGSIDGKARIWGLS 343
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 37.9 bits (84), Expect = 0.005
Identities = 24/84 (28%), Positives = 41/84 (48%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 285
L HN + +A + ++ S D +++VW+ RD+ + L GH+ + +
Sbjct: 255 LSEHNSGINALALSGTNGSLLHSGGSDGSILVWE--RDDGGDIVVVGMLRGHTESVLCLA 312
Query: 286 LSSDGNYALSASWDKTLRLWDLAA 357
+ SD S S DKT+RLW +A
Sbjct: 313 VVSD--ILCSGSADKTVRLWKCSA 334
Score = 35.1 bits (77), Expect = 0.036
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 259 HSHFISDVVLSSDGNYALSASWDKTLRLW 345
H +S + LS DG S SWD+TL++W
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIW 192
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 37.9 bits (84), Expect = 0.005
Identities = 23/58 (39%), Positives = 26/58 (44%)
Frame = +1
Query: 217 DENNYGIPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHT 390
D N P GH +S V S+ A SAS D TLRLWD+ R F HT
Sbjct: 534 DLRNISQPLHVFSGHKKAVSYVKFLSNNELA-SASTDSTLRLWDVKDNLPVRTFRGHT 590
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 37.5 bits (83), Expect = 0.007
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR-DENNYGI-------PQKRLY-- 255
+ H G V Q+ +P + ++ SS D+ L+VW L R E I P + L+
Sbjct: 300 MSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSH 359
Query: 256 -GHSHFISDVVLSSDGNYAL-SASWDKTLRLWDLA 354
GH ISD + + + + S + D +L++W +A
Sbjct: 360 GGHKAKISDFAWNKNEPWVIASVAEDNSLQVWQMA 394
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 37.1 bits (82), Expect = 0.009
Identities = 22/93 (23%), Positives = 46/93 (49%)
Frame = +1
Query: 118 NGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSD 297
NG V Q+ + D++ + ++D +++VW+ + + P L GH+ ++ V L
Sbjct: 220 NGPVGQVYSLVVGTDLLFAGTQDGSILVWRYNSTTSCFD-PAASLLGHT--LAVVSLYVG 276
Query: 298 GNYALSASWDKTLRLWDLAAGKTTRRFEDHTKV 396
N S + D ++++W L + + +HT V
Sbjct: 277 ANRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSV 309
Score = 36.7 bits (81), Expect = 0.012
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1
Query: 247 RLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTT 369
+L GH ++ + L S + +AS D+T+R+WD A+G+ T
Sbjct: 139 QLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCT 179
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 82 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 204
++ L L GH VT IA P D + ++S+D+T+ +W
Sbjct: 132 DSFSLLTQLDGHQKVVTGIAL-PSGSDKLYTASKDETVRIW 171
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 37.1 bits (82), Expect = 0.009
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Frame = +1
Query: 85 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ-KRLYGH 261
T KL GH VT + + +++S S+D ++ VW L R +++ Q LY H
Sbjct: 109 TGKLLKKWHGHYRSVTCLVFSGD-DSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEH 167
Query: 262 S---HFIS--DVVLSSDGNYA--LSASWDKTLRLWDLAAGK 363
+ H +S D+V+ G A +S+S D+T ++W L+ GK
Sbjct: 168 NFNEHTMSVTDIVIDYGGCNAVIISSSEDRTCKVWSLSRGK 208
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 37.1 bits (82), Expect = 0.009
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = +1
Query: 217 DENNYGIP---QKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWD 348
+EN Y IP + +L GH+ +S + + S G LS S+D T+R++D
Sbjct: 159 EENRYQIPLSNEIQLKGHTKIVSSLAVDSAGARVLSGSYDYTVRMYD 205
Score = 34.3 bits (75), Expect = 0.063
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +1
Query: 259 HSHFISDVVLSSDGNYALSASWDKTLRLWDL 351
H+ I+ V SSDG LS S+D +L++WDL
Sbjct: 372 HTDDITSVKFSSDGRILLSRSFDGSLKVWDL 402
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/89 (20%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = +1
Query: 109 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF-ISDVV 285
+GH +T +P+ + +L+SS D +L +W + + + + +L ++
Sbjct: 275 KGHICGLTCGEWHPRTKETVLTSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCA 334
Query: 286 LSSDGNYALSASWDKTLRLWDLAAGKTTR 372
DG D ++++W L G +R
Sbjct: 335 WDRDGKRIAGGVGDGSIQIWSLKPGWGSR 363
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 36.7 bits (81), Expect = 0.012
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = +1
Query: 103 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 282
T GH G + +A +P ++ + D +WK+ + +P GH +S +
Sbjct: 65 TFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELP-----GHKDSVSCL 119
Query: 283 VLSSDGNYALSASWDKTLRLWDLAAG 360
S DG S D ++++D ++G
Sbjct: 120 AFSYDGQLLASGGLDGVVQIFDASSG 145
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 36.3 bits (80), Expect = 0.015
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +1
Query: 163 MILSSSRDKTLIVWKLTRDENNYGIPQ-KRLYGHSHFISDVVLSSDGNYALSASWDKTLR 339
M+ + + +++VWK T D + L GHS ++ + G S S DKT++
Sbjct: 224 MLFAGTSSGSILVWKATTDSESDPFKYLTSLEGHSGEVTCFAVG--GQMLYSGSVDKTIK 281
Query: 340 LWDLAAGKTTRRFEDHT 390
+WDL + + HT
Sbjct: 282 MWDLNTLQCIMTLKQHT 298
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 250 LYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGK 363
L GH+ + + L + S S D TLR+WD +G+
Sbjct: 127 LEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQ 164
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 36.3 bits (80), Expect = 0.015
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +1
Query: 163 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRL 342
M+ S+ DK ++W + P+ L H+ I+D+ S ++S+DKT+R+
Sbjct: 665 MLASAGHDKKAVLWYTDTMK-----PKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRV 719
Query: 343 WDL-AAGKTTRRFEDHTKV 396
WD G + R F H+ +
Sbjct: 720 WDADNKGYSLRTFMGHSSM 738
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/67 (23%), Positives = 33/67 (49%)
Frame = +1
Query: 145 NPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSASW 324
+P YP +++ ++L +W ++ ++ L H I+ + +S+ SAS
Sbjct: 871 HPAYPSLLVIGCY-QSLELWNMSENKT------MTLPAHEGLITSLAVSTATGLVASASH 923
Query: 325 DKTLRLW 345
DK ++LW
Sbjct: 924 DKLVKLW 930
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +1
Query: 103 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 210
T GH+ VT + +P D+I S D + W +
Sbjct: 731 TFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSI 766
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 36.3 bits (80), Expect = 0.015
Identities = 23/79 (29%), Positives = 35/79 (44%)
Frame = +1
Query: 115 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS 294
H V + + ++ILS S D VW R P L GH ++ +
Sbjct: 270 HTSDVNTVCFADESGNLILSGSDDNLCKVWD-RRCFIGRDKPAGVLVGHLEGVTFIDSRG 328
Query: 295 DGNYALSASWDKTLRLWDL 351
DG Y +S D+T++LWD+
Sbjct: 329 DGRYFISNGKDQTIKLWDI 347
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +1
Query: 256 GHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHT 390
G+S I V S+DG ++ S D ++ ++DL A + + R HT
Sbjct: 227 GYSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHT 271
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 36.3 bits (80), Expect = 0.015
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = +1
Query: 163 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRL 342
++ S+ DK + +W + + P++ H+H I+DV + ++S+DKT+++
Sbjct: 522 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 576
Query: 343 WD 348
WD
Sbjct: 577 WD 578
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +1
Query: 136 IATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALS 315
+ +P YPD+++ + + +W EN + GH IS + S S
Sbjct: 722 VVFHPSYPDLLVIGGY-QAIELWNTM--ENKC----MTVAGHECVISALAQSPSTGVVAS 774
Query: 316 ASWDKTLRLW 345
AS DK++++W
Sbjct: 775 ASHDKSVKIW 784
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +1
Query: 103 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 207
T+ GH ++ +A +P ++ S+S DK++ +WK
Sbjct: 752 TVAGHECVISALAQSPS-TGVVASASHDKSVKIWK 785
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 36.3 bits (80), Expect = 0.015
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = +1
Query: 163 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRL 342
++ S+ DK + +W + + P++ H+H I+DV + ++S+DKT+++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 343 WD 348
WD
Sbjct: 579 WD 580
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +1
Query: 136 IATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALS 315
+ +P YPD+++ + + +W EN + GH IS + S S
Sbjct: 724 VVFHPSYPDLLVIGGY-QAIELWNTM--ENKC----MTVAGHECVISALAQSPSTGVVAS 776
Query: 316 ASWDKTLRLW 345
AS DK++++W
Sbjct: 777 ASHDKSVKIW 786
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +1
Query: 103 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 207
T+ GH ++ +A +P ++ S+S DK++ +WK
Sbjct: 754 TVAGHECVISALAQSPS-TGVVASASHDKSVKIWK 787
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 36.3 bits (80), Expect = 0.015
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = +1
Query: 163 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRL 342
++ S+ DK + +W + + P++ H+H I+DV + ++S+DKT+++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 343 WD 348
WD
Sbjct: 579 WD 580
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +1
Query: 136 IATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALS 315
+ +P YPD+++ + + +W EN + GH IS + S S
Sbjct: 724 VVFHPSYPDLLVIGGY-QAIELWNTM--ENKC----MTVAGHECVISALAQSPSTGVVAS 776
Query: 316 ASWDKTLRLW 345
AS DK++++W
Sbjct: 777 ASHDKSVKIW 786
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +1
Query: 103 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 207
T+ GH ++ +A +P ++ S+S DK++ +WK
Sbjct: 754 TVAGHECVISALAQSPS-TGVVASASHDKSVKIWK 787
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 36.3 bits (80), Expect = 0.015
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = +1
Query: 163 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRL 342
++ S+ DK + +W + + P++ H+H I+DV + ++S+DKT+++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 343 WD 348
WD
Sbjct: 579 WD 580
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +1
Query: 136 IATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALS 315
+ +P YPD+++ + + +W EN + GH IS + S S
Sbjct: 724 VVFHPSYPDLLVIGGY-QAIELWNTM--ENKC----MTVAGHECVISALAQSPSTGVVAS 776
Query: 316 ASWDKTLRLW 345
AS DK++++W
Sbjct: 777 ASHDKSVKIW 786
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +1
Query: 103 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 207
T+ GH ++ +A +P ++ S+S DK++ +WK
Sbjct: 754 TVAGHECVISALAQSPS-TGVVASASHDKSVKIWK 787
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 36.3 bits (80), Expect = 0.015
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = +1
Query: 163 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRL 342
++ S+ DK + +W + + P++ H+H I+DV + ++S+DKT+++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 343 WD 348
WD
Sbjct: 579 WD 580
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +1
Query: 136 IATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALS 315
+ +P YPD+++ + + +W EN + GH IS + S S
Sbjct: 724 VVFHPSYPDLLVIGGY-QAIELWNTM--ENKC----MTVAGHECVISALAQSPSTGVVAS 776
Query: 316 ASWDKTLRLW 345
AS DK++++W
Sbjct: 777 ASHDKSVKIW 786
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +1
Query: 103 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 207
T+ GH ++ +A +P ++ S+S DK++ +WK
Sbjct: 754 TVAGHECVISALAQSPS-TGVVASASHDKSVKIWK 787
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 36.3 bits (80), Expect = 0.015
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 247 RLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTT 369
R H ++ + ++DG Y LSA D +RLWD+ +G+ T
Sbjct: 307 RATAHYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRNT 347
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 35.9 bits (79), Expect = 0.020
Identities = 20/78 (25%), Positives = 34/78 (43%)
Frame = +1
Query: 145 NPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSASW 324
NP + S+S D T+ +W + G GH + + S +G Y S S
Sbjct: 507 NPNKQLTLASASFDSTVKLW-----DAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSL 561
Query: 325 DKTLRLWDLAAGKTTRRF 378
DK++ +W + GK + +
Sbjct: 562 DKSIHIWSIKEGKIVKTY 579
Score = 34.7 bits (76), Expect = 0.047
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 4/109 (3%)
Frame = +1
Query: 73 KMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ--K 246
K+ ET + T GH G V + +P ++ S S D T +W + + + + + K
Sbjct: 434 KIGETRPAK-TFTGHQGEVNCVKWDPT-GSLLASCSDDSTAKIWNIKQSTFVHDLREHTK 491
Query: 247 RLYGHSHFISDVVLSSDGNYAL--SASWDKTLRLWDLAAGKTTRRFEDH 387
+Y + ++ SAS+D T++LWD GK F H
Sbjct: 492 EIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGH 540
Score = 30.7 bits (66), Expect = 0.77
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +1
Query: 259 HSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHT 390
H I + + G+Y L+ S D+T +WD+ A + ++FE H+
Sbjct: 364 HKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHS 407
Score = 30.3 bits (65), Expect = 1.0
Identities = 26/99 (26%), Positives = 46/99 (46%)
Frame = +1
Query: 91 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 270
+L TL H G + + N K D +L+ S D+T +VW + +E +++ HS
Sbjct: 356 ELISTLSKHKGPIFSLKWNKK-GDYLLTGSVDRTAVVWDVKAEE-----WKQQFEFHSGP 409
Query: 271 ISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDH 387
DV ++ ++A S S D + L + + + F H
Sbjct: 410 TLDVDWRNNVSFATS-STDSMIYLCKIGETRPAKTFTGH 447
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = +1
Query: 238 PQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHTK 393
P K GH ++ V G+ S S D T ++W++ +HTK
Sbjct: 440 PAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTK 491
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 35.9 bits (79), Expect = 0.020
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +1
Query: 103 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 282
T+ GH+ T ++ N P+++ + S+D+T+ +W L+ +E + G FI+
Sbjct: 364 TINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIA-- 421
Query: 283 VLSSDGNYALSASWDK-TLRLWD 348
S D + L+ L+LWD
Sbjct: 422 -FSPDNPFLLAMGGVMGELKLWD 443
Score = 31.9 bits (69), Expect = 0.33
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 301 NYALSASWDKTLRLWDLAAGKTTRRFEDHTK 393
N SAS DK +++WD+A G E HTK
Sbjct: 247 NILASASADKKVKVWDVATGTCKITMEHHTK 277
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 35.9 bits (79), Expect = 0.020
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 82 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 210
E K G L GH G V + ++P D+++S SRD +W L
Sbjct: 158 EENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDL 200
Score = 30.7 bits (66), Expect = 0.77
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = +1
Query: 211 TRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHT 390
T EN + H + I D+ + L+AS D+T+++WD+ K T HT
Sbjct: 111 THQENTEKARFRDWIAHYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHT 170
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 35.9 bits (79), Expect = 0.020
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 1/116 (0%)
Frame = +1
Query: 52 SLFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY 231
++F P S + K + +GH V +A + +LSSS DKT+ +W L+
Sbjct: 491 NIFVPDSLFGLSEKPFCSFQGHVDDVLDLAWSKS--QHLLSSSMDKTVRLWNLSSQ---- 544
Query: 232 GIPQKRLYGHSHFISDVVLSS-DGNYALSASWDKTLRLWDLAAGKTTRRFEDHTKV 396
+++ HS +++ + + D Y +S S D +R+W + + ++ H V
Sbjct: 545 --TCLKVFSHSDYVTCIQFNPVDDRYFISGSLDAKVRVWSIPDRQVVDWYDLHEMV 598
Score = 31.5 bits (68), Expect = 0.44
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +1
Query: 187 KTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV--LSSDGNYALSASWDKTLRLWDLAA 357
K+L + + ++ +G+ +K + DV+ S + LS+S DKT+RLW+L++
Sbjct: 485 KSLSLENIFVPDSLFGLSEKPFCSFQGHVDDVLDLAWSKSQHLLSSSMDKTVRLWNLSS 543
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 35.9 bits (79), Expect = 0.020
Identities = 17/78 (21%), Positives = 37/78 (47%)
Frame = +1
Query: 127 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY 306
++ ++ +PK D+++++S D + W++TR + + K H + DG
Sbjct: 29 ISSLSFSPK-ADILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCSAWKDDGTT 87
Query: 307 ALSASWDKTLRLWDLAAG 360
+ DK ++W L +G
Sbjct: 88 VFTGGCDKQAKMWPLLSG 105
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 35.9 bits (79), Expect = 0.020
Identities = 24/101 (23%), Positives = 43/101 (42%)
Frame = +1
Query: 58 FKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI 237
F+ F +T +++ L GH V + +P ++ SSS D T+ +W + +
Sbjct: 457 FEIFVWSKKTGQIKDILSGHEAPVHGLMFSP-LTQLLASSSWDYTVRLWDVFASKGTV-- 513
Query: 238 PQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAG 360
+ H+H + V DG S++ D + WD G
Sbjct: 514 ---ETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEG 551
Score = 33.9 bits (74), Expect = 0.083
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 250 LYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTT 369
L GH + ++ S S+SWD T+RLWD+ A K T
Sbjct: 473 LSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGT 512
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 259 HSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHT 390
H++ ++ + +D + LSAS D T+R WD K + + T
Sbjct: 390 HTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPT 433
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 35.9 bits (79), Expect = 0.020
Identities = 24/101 (23%), Positives = 43/101 (42%)
Frame = +1
Query: 58 FKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI 237
F+ F +T +++ L GH V + +P ++ SSS D T+ +W + +
Sbjct: 497 FEIFVWSKKTGQIKDILSGHEAPVHGLMFSP-LTQLLASSSWDYTVRLWDVFASKGTV-- 553
Query: 238 PQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAG 360
+ H+H + V DG S++ D + WD G
Sbjct: 554 ---ETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEG 591
Score = 33.9 bits (74), Expect = 0.083
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 250 LYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTT 369
L GH + ++ S S+SWD T+RLWD+ A K T
Sbjct: 513 LSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGT 552
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 259 HSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHT 390
H++ ++ + +D + LSAS D T+R WD K + + T
Sbjct: 430 HTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPT 473
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 35.5 bits (78), Expect = 0.027
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +1
Query: 166 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS-DGNYALSASWDKTLRL 342
+LSSS DKT+ +W L+ +++ HS +++ + + D NY +S S D +R+
Sbjct: 482 LLSSSMDKTVRLWDLSSKTC------LKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRI 535
Query: 343 WDL 351
W +
Sbjct: 536 WSI 538
Score = 34.7 bits (76), Expect = 0.047
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Frame = +1
Query: 118 NGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV-LS- 291
NG ++ +PK S SR K++ + + E +G+ +K + + DV+ LS
Sbjct: 419 NGSPEPVSMSPKRRGRT-SFSR-KSVSLDNVLVPEAVFGLSEKPVCSFVGHLDDVLDLSW 476
Query: 292 SDGNYALSASWDKTLRLWDLAAGKTTRRFEDHT 390
S + LS+S DKT+RLWDL++ KT + H+
Sbjct: 477 SKSQHLLSSSMDKTVRLWDLSS-KTCLKVFSHS 508
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 35.5 bits (78), Expect = 0.027
Identities = 31/113 (27%), Positives = 51/113 (45%)
Frame = +1
Query: 52 SLFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY 231
++ KP S M + ++ LRGH V A + +++ S D+ + +W + E
Sbjct: 284 AIAKP-STMVQKMQNIKKLRGHRNAV-YCAIFDRSGRYVITGSDDRLVKIWSM---ETAL 338
Query: 232 GIPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHT 390
+ R GH I+D+ +SS+ SAS D +R+W L G HT
Sbjct: 339 CLASCR--GHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISVLRGHT 389
Score = 32.7 bits (71), Expect = 0.19
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDM--ILSSSRDKTLIVW 204
LRGH G VT IA +P+ + +LSSS D T +W
Sbjct: 385 LRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIW 419
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 35.5 bits (78), Expect = 0.027
Identities = 24/92 (26%), Positives = 47/92 (51%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 285
++GH +T + N + D++ S ++D T +W +N + R GH+ +
Sbjct: 6 MKGHERPLTFLRYN-REGDLLFSCAKDHTPTLWFA---DNGERLGTYR--GHNGAVWCCD 59
Query: 286 LSSDGNYALSASWDKTLRLWDLAAGKTTRRFE 381
+S D + ++ S D+T +LWD+ +GK F+
Sbjct: 60 VSRDSSRLITGSADQTAKLWDVKSGKELFTFK 91
Score = 33.9 bits (74), Expect = 0.083
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 166 ILSSSRDKTLIVWKLTRDENNYGIPQK-RLYGHSHFISDVVLSSDGNYALSASWDKTLRL 342
I+S DK + +W E + Q GH I+ + ++D ++ L+ S DKT +L
Sbjct: 163 IVSGGEDKVIRIWDA---ETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 343 WDL 351
WD+
Sbjct: 220 WDM 222
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 35.5 bits (78), Expect = 0.027
Identities = 24/92 (26%), Positives = 47/92 (51%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 285
++GH +T + N + D++ S ++D T +W +N + R GH+ +
Sbjct: 6 MKGHERPLTFLRYN-REGDLLFSCAKDHTPTLWFA---DNGERLGTYR--GHNGAVWCCD 59
Query: 286 LSSDGNYALSASWDKTLRLWDLAAGKTTRRFE 381
+S D + ++ S D+T +LWD+ +GK F+
Sbjct: 60 VSRDSSRLITGSADQTAKLWDVKSGKELFTFK 91
Score = 33.9 bits (74), Expect = 0.083
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 166 ILSSSRDKTLIVWKLTRDENNYGIPQK-RLYGHSHFISDVVLSSDGNYALSASWDKTLRL 342
I+S DK + +W E + Q GH I+ + ++D ++ L+ S DKT +L
Sbjct: 163 IVSGGEDKVIRIWDA---ETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 343 WDL 351
WD+
Sbjct: 220 WDM 222
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 35.5 bits (78), Expect = 0.027
Identities = 24/92 (26%), Positives = 47/92 (51%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 285
++GH +T + N + D++ S ++D T +W +N + R GH+ +
Sbjct: 6 MKGHERPLTFLRYN-REGDLLFSCAKDHTPTLWFA---DNGERLGTYR--GHNGAVWCCD 59
Query: 286 LSSDGNYALSASWDKTLRLWDLAAGKTTRRFE 381
+S D + ++ S D+T +LWD+ +GK F+
Sbjct: 60 VSRDSSRLITGSADQTAKLWDVKSGKELFTFK 91
Score = 33.9 bits (74), Expect = 0.083
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 166 ILSSSRDKTLIVWKLTRDENNYGIPQK-RLYGHSHFISDVVLSSDGNYALSASWDKTLRL 342
I+S DK + +W E + Q GH I+ + ++D ++ L+ S DKT +L
Sbjct: 163 IVSGGEDKVIRIWDA---ETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 343 WDL 351
WD+
Sbjct: 220 WDM 222
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 35.5 bits (78), Expect = 0.027
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Frame = +1
Query: 115 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS- 291
H V + NP D L+SS D T+ +W + R + + H++ + V +
Sbjct: 105 HAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPAS-----VRTFKEHAYCVYQAVWNP 159
Query: 292 SDGNYALSASWDKTLRLWDLAAGKTTRRFEDH 387
G+ SAS D TLR+WD+ +T H
Sbjct: 160 KHGDVFASASGDCTLRIWDVREPGSTMIIPAH 191
Score = 35.5 bits (78), Expect = 0.027
Identities = 24/83 (28%), Positives = 38/83 (45%)
Frame = +1
Query: 103 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 282
T + H V Q NPK+ D+ S+S D TL +W + + IP +S
Sbjct: 144 TFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDF----EILSCD 199
Query: 283 VLSSDGNYALSASWDKTLRLWDL 351
D ++S DKT+++WD+
Sbjct: 200 WNKYDDCILATSSVDKTVKVWDV 222
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 35.1 bits (77), Expect = 0.036
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Frame = +1
Query: 43 RESSLFKPFSKMSETLKLRGT--LRGH-NGWVTQIATNPKYPDMILSSSRDKTLI-VWKL 210
+E S FK S + + + + G GH +G + +PK + S TL ++K
Sbjct: 125 KEFSAFKCNSGLVKAIVISGEKIFTGHQDGKIRVWKVSPKNQSLHKRSGTLPTLKDIFKA 184
Query: 211 TRDENNYGIPQKRLYG----HSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRF 378
+ NY +K H+ +S + L+ + SASWD+T+++W +A K
Sbjct: 185 SLKPRNYVEVKKHRTALWIKHADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESI 244
Query: 379 EDH 387
H
Sbjct: 245 PAH 247
Score = 27.5 bits (58), Expect = 7.2
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 9/105 (8%)
Frame = +1
Query: 67 FSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQK 246
F + + L G L+GH V + ++ S S DKT+ VWK RD N +
Sbjct: 321 FWEREKQLNYGGILKGHKLAVLCLEVAGS---LVFSGSADKTICVWK--RDGNIHTC-LS 374
Query: 247 RLYGHSHFISDVVLSSDGN---------YALSASWDKTLRLWDLA 354
L GH+ + + + +D S S DK++++W ++
Sbjct: 375 VLTGHTGPVKCLAVEADREASERRDKKWIVYSGSLDKSVKVWGVS 419
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 35.1 bits (77), Expect = 0.036
Identities = 26/90 (28%), Positives = 35/90 (38%)
Frame = +1
Query: 79 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 258
S T+ RG GH V +A +P S D LI+W N +K
Sbjct: 279 SPTVGPRGVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDA 338
Query: 259 HSHFISDVVLSSDGNYALSASWDKTLRLWD 348
H + D N L+ S D T+RL+D
Sbjct: 339 DLHCVD--WNPHDDNLILTGSADNTVRLFD 366
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 35.1 bits (77), Expect = 0.036
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 259 HSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDH 387
H +S + L+ D S SWDKTL++W L+ K E H
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAH 286
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +1
Query: 163 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRL 342
++ S S DKTL VW+L+ + + + H ++ VV D + + S D TL++
Sbjct: 259 LLYSGSWDKTLKVWRLSDSK-----CLESIEAHDDAVNTVVSGFD-DLVFTGSADGTLKV 312
Query: 343 W 345
W
Sbjct: 313 W 313
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 35.1 bits (77), Expect = 0.036
Identities = 19/87 (21%), Positives = 42/87 (48%)
Frame = +1
Query: 88 LKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSH 267
L+ + +++ H+ V IA + + + S D+ + VW E + + L H
Sbjct: 225 LRCKESIKAHDDAVNAIAVSTN--GTVYTGSADRRIRVWAKPTGEKRHTLVAT-LEKHKS 281
Query: 268 FISDVVLSSDGNYALSASWDKTLRLWD 348
++ + L+ DG+ S S D+++ +W+
Sbjct: 282 AVNALALNDDGSVLFSGSCDRSILVWE 308
Score = 33.1 bits (72), Expect = 0.14
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Frame = +1
Query: 79 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 258
S + +RG LRGH+ + + D++LS S D+T+ +W+ D ++Y + L G
Sbjct: 313 SNYMAVRGALRGHDKAILSLFN---VSDLLLSGSADRTVRIWRRGPD-SSYSCLEV-LSG 367
Query: 259 HSHFISDVVL-----SSDGNYALSASWDKTLRLWDLAAGKTTRRF 378
H+ + + D +S S D ++ W ++ K F
Sbjct: 368 HTKPVKSLAAVREKELDDVVSIISGSLDGEVKCWKVSVTKPDNSF 412
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Frame = +1
Query: 241 QKRLY-GHSHFISDVVLSSDGNYALSASWDKTLRLW---DLAAGKTTRRFED 384
+KRL+ H+ ++ + +S DG + S SWDKTL++W DL ++ + +D
Sbjct: 187 KKRLWIEHADAVTALAVS-DG-FIYSVSWDKTLKIWRASDLRCKESIKAHDD 236
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 35.1 bits (77), Expect = 0.036
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Frame = +1
Query: 100 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISD 279
G LRGH + +A D++LS S DK+L VW+ E L GH+ +
Sbjct: 322 GALRGHRKAIMCLAVAS---DLVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPVKS 378
Query: 280 VVLS---SDGN-----YALSASWDKTLRLWDL 351
+ +S SD N S S D +L++W+L
Sbjct: 379 LAVSVSDSDSNSDYSCMVYSGSLDLSLKVWNL 410
Score = 34.7 bits (76), Expect = 0.047
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 259 HSHFISDVVLSSDGNYALSASWDKTLRLW 345
H +S + LS DG+ SASWD++ ++W
Sbjct: 191 HVDAVSSLALSQDGSLLYSASWDRSFKIW 219
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/61 (22%), Positives = 31/61 (50%)
Frame = +1
Query: 166 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLW 345
+ + S DK + VW +D+ + + L H ++ + +S DG S + D+++ +W
Sbjct: 249 VYTGSADKKIKVWN-KKDKKHSLVAT--LTKHLSAVNALAISEDGKVLYSGACDRSILVW 305
Query: 346 D 348
+
Sbjct: 306 E 306
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 34.7 bits (76), Expect = 0.047
Identities = 18/65 (27%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +1
Query: 163 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS-DGNYALSASWDKTLR 339
++LSSS DKT+ +W + +L+ H+ +++ V + D +Y +S S D +R
Sbjct: 532 LLLSSSMDKTVRLWDIETQS------CLKLFAHNDYVTCVQFNPLDEDYFISGSLDAKIR 585
Query: 340 LWDLA 354
+W+++
Sbjct: 586 IWNIS 590
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 220 ENNYGIPQKRLYGHSHFISDVV-LS-SDGNYALSASWDKTLRLWDLAAGKTTRRF 378
E + + K + + + DV+ LS S LS+S DKT+RLWD+ + F
Sbjct: 502 ETVFSLSDKPICSFTGHLDDVLDLSWSRSQLLLSSSMDKTVRLWDIETQSCLKLF 556
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 213
L HN +VT + NP D +S S D + +W ++
Sbjct: 555 LFAHNDYVTCVQFNPLDEDYFISGSLDAKIRIWNIS 590
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 34.7 bits (76), Expect = 0.047
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 259 HSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKT 366
H H ++ V LS D + S S D T+ WD+++GK+
Sbjct: 144 HQHSVTGVALSDDDSRGFSVSKDGTILHWDVSSGKS 179
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 34.7 bits (76), Expect = 0.047
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 256 GHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTR 372
GHS ++ VV S + L+ S D T R+WD GK +
Sbjct: 199 GHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVK 237
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 34.3 bits (75), Expect = 0.063
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Frame = +1
Query: 103 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI------PQKRLY--- 255
T H V Q+ NPK ++ S + L+VW L+R + + P + L+
Sbjct: 312 TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAEDGPPELLFIHG 371
Query: 256 GHSHFISDVVLSSDGNYALSA-SWDKTLRLWDLA 354
GH+ ISD + ++ +S+ + D L++W +A
Sbjct: 372 GHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405
Score = 33.1 bits (72), Expect = 0.14
Identities = 23/105 (21%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Frame = +1
Query: 79 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 258
+++L + + H G V +A + ++ + S D+ L++W L + P + +
Sbjct: 214 NKSLDAQQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASK--PVQSVVA 271
Query: 259 HSHFISDVVLSSDGNYAL-SASWDKTLRLWDLAAGKTT-RRFEDH 387
HS ++ + + + + + S DKT++L+DL T F+ H
Sbjct: 272 HSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLSTALHTFDSH 316
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 34.3 bits (75), Expect = 0.063
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 204
L GH+ V ++ NPK P M+ S+S D+T+ +W
Sbjct: 481 LSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 34.3 bits (75), Expect = 0.063
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +1
Query: 232 GIPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWD 348
G+ L H ++D+ SSD ++ +SAS D T+++WD
Sbjct: 1071 GVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWD 1109
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +1
Query: 163 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRL 342
M++ S+++ + +W D + + + G ++S +V S GN+ +S S L L
Sbjct: 1203 MVMYSTQNCGIHLWDTRSDLDAWTLKANPEEG---YVSSLVTSPCGNWFVSGSSRGVLTL 1259
Query: 343 WDL 351
WDL
Sbjct: 1260 WDL 1262
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 34.3 bits (75), Expect = 0.063
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 259 HSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTR 372
H + V LS D + SAS D T+ WD+++GKT +
Sbjct: 160 HRRSVVSVALSDDDSRGFSASKDGTIMHWDVSSGKTDK 197
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +1
Query: 166 ILSSSRDKTLIVWKLTRDENNYGIP--QKRLYGHSHFISDVVLSSDGNYALSASWDKTLR 339
+ S DK +W ++G+ + R HS + +SSDG Y + D+ +
Sbjct: 190 VSSGKTDK--YIWPSDEILKSHGMKLREPRNKNHSRESLALAVSSDGRYLATGGVDRHVH 247
Query: 340 LWDLAAGKTTRRFEDH 387
+WD+ + + F H
Sbjct: 248 IWDVRTREHVQAFPGH 263
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 34.3 bits (75), Expect = 0.063
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 94 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 243
LR RGH+ VT +A + DM+ S S D + VWK++ PQ
Sbjct: 194 LRSLFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQ 243
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 34.3 bits (75), Expect = 0.063
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 94 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 243
LR RGH+ VT +A + DM+ S S D + VWK++ PQ
Sbjct: 229 LRSLFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQ 278
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 34.3 bits (75), Expect = 0.063
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 103 TLRGHNGWVTQIA-TNPKYPDMILSSSRDKTLIVWK 207
TL GH G V Q+A +PK+ ++ S S D +I+WK
Sbjct: 51 TLTGHRGPVWQVAWAHPKFGSLLASCSYDGQIILWK 86
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 238 PQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRL 342
PQK GHS I DVV+ G +AS D T+++
Sbjct: 3 PQKIETGHSDTIHDVVMDYYGKRVATASSDCTIKI 37
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 34.3 bits (75), Expect = 0.063
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 285
L GH +V +P M+++ S D T+ VW +N+ I + H + DVV
Sbjct: 174 LLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWDARVHTSNW-IAE---INHGLPVEDVV 229
Query: 286 LSSDGNYALSASWDKTLRLWDL-AAGKTTRRFEDHTK 393
G +A ++++WDL GK E H K
Sbjct: 230 YLPSGGLIATAG-GNSVKVWDLIGGGKMVCSMESHNK 265
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 32.3 bits (70), Expect(2) = 0.073
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +1
Query: 253 YGHSHFISDVVLSSDGNYALSASWDKTLRLW---DLAAGKTTRRFED 384
+ H IS + LS D S SWDKT ++W DL ++ ED
Sbjct: 208 FRHLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAHED 254
Score = 20.6 bits (41), Expect(2) = 0.073
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +1
Query: 160 DMILSSSRDKTLIVWKLTRDENN 228
D I + +D + VWK E+N
Sbjct: 147 DKIFTGHQDGKIRVWKAASKESN 169
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 33.9 bits (74), Expect = 0.083
Identities = 23/92 (25%), Positives = 42/92 (45%)
Frame = +1
Query: 70 SKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKR 249
S+ +++ K+ +L H V + +P ++S S D + I+W + N G +
Sbjct: 37 SETNQSWKVHKSLSFHRKDVLDLQWSPD-DAYLISGSVDNSCIIWDV-----NKGSVHQI 90
Query: 250 LYGHSHFISDVVLSSDGNYALSASWDKTLRLW 345
L H H++ V Y S S D+T R++
Sbjct: 91 LDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 122
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 33.9 bits (74), Expect = 0.083
Identities = 23/92 (25%), Positives = 42/92 (45%)
Frame = +1
Query: 70 SKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKR 249
S+ +++ K+ +L H V + +P ++S S D + I+W + N G +
Sbjct: 96 SETNQSWKVHKSLSFHRKDVLDLQWSPD-DAYLISGSVDNSCIIWDV-----NKGSVHQI 149
Query: 250 LYGHSHFISDVVLSSDGNYALSASWDKTLRLW 345
L H H++ V Y S S D+T R++
Sbjct: 150 LDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 181
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 33.9 bits (74), Expect = 0.083
Identities = 23/92 (25%), Positives = 42/92 (45%)
Frame = +1
Query: 70 SKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKR 249
S+ +++ K+ +L H V + +P ++S S D + I+W + N G +
Sbjct: 96 SETNQSWKVHKSLSFHRKDVLDLQWSPD-DAYLISGSVDNSCIIWDV-----NKGSVHQI 149
Query: 250 LYGHSHFISDVVLSSDGNYALSASWDKTLRLW 345
L H H++ V Y S S D+T R++
Sbjct: 150 LDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 181
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 33.9 bits (74), Expect = 0.083
Identities = 22/77 (28%), Positives = 34/77 (44%)
Frame = +1
Query: 121 GWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDG 300
G V Q+ M+ + + +++VWK T E++ L GH H G
Sbjct: 264 GVVGQVHAMTAANGMLFAGTSSGSILVWKATDSESDPFKYLTSLEGH-HSGEVTCFVVGG 322
Query: 301 NYALSASWDKTLRLWDL 351
S S DKT+++WDL
Sbjct: 323 EVLYSGSVDKTIKVWDL 339
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 250 LYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTR 372
L GH + I + L + S S D TL +WD +G+ R
Sbjct: 183 LEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVR 223
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 33.9 bits (74), Expect = 0.083
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +1
Query: 79 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 258
SET+ +L GH V +I T P P +++++S+D+++ +W + + + G
Sbjct: 117 SETI--HKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNV--ETGICILIFAGAGG 172
Query: 259 HSHFISDVVLSSDGNYAL-SASWDKTLRLWDL 351
H + + V Y S D T+++W +
Sbjct: 173 HRYEVLSVDFHPSDIYRFASCGMDTTIKIWSM 204
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 33.9 bits (74), Expect = 0.083
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 103 TLRGHNGWVTQIA-TNPKYPDMILSSSRDKTLIVWK 207
TL GH G V ++A +PKY ++ S S D +I+WK
Sbjct: 51 TLTGHRGPVWEVAWAHPKYGSILASCSYDGQVILWK 86
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 33.9 bits (74), Expect = 0.083
Identities = 16/78 (20%), Positives = 36/78 (46%)
Frame = +1
Query: 127 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY 306
++ ++ +P+ D+++++S D + W+++R + K H + DG
Sbjct: 28 ISSLSFSPR-ADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTT 86
Query: 307 ALSASWDKTLRLWDLAAG 360
S DK ++W L +G
Sbjct: 87 VFSGGCDKQAKMWPLLSG 104
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 301 NYALSASWDKTLRLWD 348
N + SWDKTL+ WD
Sbjct: 127 NLLATGSWDKTLKYWD 142
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 33.5 bits (73), Expect = 0.11
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +1
Query: 238 PQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDH 387
P L GH+ +S V DG ++A D L+LW + G+ R +E H
Sbjct: 105 PALTLQGHTKTVS-YVRFLDGGTVVTAGTDGCLKLWSVEDGRVIRTYEGH 153
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 33.1 bits (72), Expect = 0.14
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Frame = +1
Query: 256 GHSHFISDVVLSSDGNYALSASWDKTLRLWD--LAAGKTTR----RFEDHT 390
GH+ + + S GN S D + +WD LA+ K TR RFE+HT
Sbjct: 250 GHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHT 300
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 33.1 bits (72), Expect = 0.14
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 204
L GH W + NP+Y ++ILS D + +W
Sbjct: 248 LPGHTHWTWAVRCNPEYEELILSVGTDSAVNLW 280
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 33.1 bits (72), Expect = 0.14
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 204
L GH W + NP+Y +ILS+ D + +W
Sbjct: 248 LPGHTHWTWAVRCNPEYDGLILSAGTDSVVNLW 280
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 33.1 bits (72), Expect = 0.14
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 247 RLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTT 369
R H ++ + ++DG Y LSA +RLWD+ +G+ T
Sbjct: 307 RATAHYGVVTGLKATNDGMYLLSAGSYSRIRLWDIESGRNT 347
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 32.7 bits (71), Expect = 0.19
Identities = 21/85 (24%), Positives = 40/85 (47%)
Frame = +1
Query: 133 QIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYAL 312
++ T P + M+ SS K + ++ R+ N+ + K H+ +S + L +
Sbjct: 200 RVGTLPTFKSMVKSSVNPKHFM--EVRRNRNS--VKTK----HNDAVSSLSLDVELGLLY 251
Query: 313 SASWDKTLRLWDLAAGKTTRRFEDH 387
S+SWD T+++W +A K H
Sbjct: 252 SSSWDTTIKVWRIADSKCLESIHAH 276
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 32.3 bits (70), Expect = 0.25
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 250 LYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAG 360
LYGH+ + V L + ++ +D +R+WD+ G
Sbjct: 158 LYGHTEAVRTVFLLASAKLVFTSGYDSIVRMWDMEEG 194
Score = 31.9 bits (69), Expect = 0.33
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 247 RLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTR 372
RL+GH I+ + L D S SWD ++R+WD ++ K +
Sbjct: 252 RLWGHEGPITSLAL--DMTSIFSGSWDMSVRIWDRSSMKCVK 291
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 32.3 bits (70), Expect = 0.25
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +1
Query: 109 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 216
R H+G+VT++ + +++SSS DKTL +W L +
Sbjct: 451 RAHDGYVTKLVAPESH--LLVSSSLDKTLRIWDLRK 484
Score = 31.1 bits (67), Expect = 0.58
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +1
Query: 259 HSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRF 378
H +++ +V + + + +S+S DKTLR+WDL T + F
Sbjct: 453 HDGYVTKLV-APESHLLVSSSLDKTLRIWDLRKSWTPQPF 491
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 32.3 bits (70), Expect = 0.25
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 259 HSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDH 387
H +S + L+ + S SWDKTL++W L+ K + H
Sbjct: 248 HYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAH 290
Score = 29.1 bits (62), Expect = 2.4
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 163 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRL 342
++ S S DKTL VW+L+ + + + H I+ V D + + S D TL++
Sbjct: 263 LLYSGSWDKTLKVWRLSDSK-----CLESIQAHDDAINTVAAGFD-DLLFTGSADGTLKV 316
Query: 343 WDL-AAGKTTRRF 378
W GK T+ F
Sbjct: 317 WKRELQGKGTKHF 329
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 32.3 bits (70), Expect = 0.25
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 259 HSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGK 363
H ++ LS G LS S DKT+R+W + GK
Sbjct: 894 HKSTVTCFSLSETGECVLSGSADKTIRVWQIVKGK 928
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 32.3 bits (70), Expect = 0.25
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 259 HSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDH 387
HS +S + L+ D SASWD+T+++W + K + H
Sbjct: 134 HSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAH 176
>At5g58760.1 68418.m07360 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
damage-specific DNA binding protein 2 (GI:10798819)
[Homo sapiens]
Length = 557
Score = 31.9 bits (69), Expect = 0.33
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +1
Query: 145 NPKYPDMILSSSRDKTLIVW---KLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALS 315
NP P+++LS D +W KL + + + KR+ ++F S G L+
Sbjct: 321 NPVQPELLLSCGNDHFARIWDMRKLQPKASLHDLAHKRVVNSAYF-----SPSSGTKILT 375
Query: 316 ASWDKTLRLWDLAAG 360
D +R+WD G
Sbjct: 376 TCQDNRIRIWDSIFG 390
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 31.9 bits (69), Expect = 0.33
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 301 NYALSASWDKTLRLWDLAAGKTTRRFEDHTK 393
N SAS DK +++WD+A G E HTK
Sbjct: 279 NILASASADKKVKVWDVATGTCKITMEHHTK 309
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +1
Query: 127 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY 306
V+ I+ N P+++ + S DK++ +W L+ +E + + G IS V D +
Sbjct: 407 VSSISYNISTPNLLATGSMDKSVKLWDLSNNEPSCIATHQPNAGAVFSISFAV---DNPF 463
Query: 307 ALSASWDK-TLRLWD 348
L+ K L +WD
Sbjct: 464 LLAIGGSKGELHVWD 478
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 31.9 bits (69), Expect = 0.33
Identities = 25/95 (26%), Positives = 43/95 (45%)
Frame = +1
Query: 103 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 282
T+ GH V +A + ++ S SRDK+++ + E++ +L GH I +
Sbjct: 246 TMEGHRLRVGALAWSSS---VLSSGSRDKSILQRDIRTQEDHVS----KLKGHKSEICGL 298
Query: 283 VLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDH 387
SSD S D L +W+ + + RF +H
Sbjct: 299 KWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEH 333
Score = 30.7 bits (66), Expect = 0.77
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +1
Query: 250 LYGHSHFISDVVLSSDGNYALSASWDKTLRLWDL 351
L GHS+ + + +S DG ++ + D+TLR W++
Sbjct: 418 LTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNV 451
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 31.9 bits (69), Expect = 0.33
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 247 RLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDL 351
RL GH I +V S DG+ +S S D++ R+W++
Sbjct: 230 RLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEI 264
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 31.9 bits (69), Expect = 0.33
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 247 RLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDL 351
RL GH I +V S DG+ +S S D++ R+W++
Sbjct: 230 RLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEI 264
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 31.9 bits (69), Expect = 0.33
Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 5/104 (4%)
Frame = +1
Query: 55 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG 234
L+ P S S + L H G V + N K P+ + S + D T+ +W L N
Sbjct: 94 LWNPISSESGEIAHVRDLSKHKGPVRGLEFNVKSPNQLASGADDGTVCIWDLA----NPS 149
Query: 235 IPQKRLYGHSHFISDVVLSSDGNYAL-----SASWDKTLRLWDL 351
P L G ++ + S N S S + T +WD+
Sbjct: 150 KPSHYLKGTGSYMQSEISSLSWNKGFQHVLASTSHNGTTVIWDV 193
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 31.1 bits (67), Expect = 0.58
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Frame = +1
Query: 172 SSSRD-KTLIVWKLTRDENNYGIPQKR-----LYGHSHFISDVVLSS-DGNYALSASWDK 330
S SRD K L+ L+ + +PQ L GH ++DVV SS D +AS D+
Sbjct: 70 SLSRDGKILVTCSLSGVPKLWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDECLATASTDR 129
Query: 331 TLRLW 345
T ++W
Sbjct: 130 TEKIW 134
Score = 27.1 bits (57), Expect = 9.5
Identities = 22/64 (34%), Positives = 26/64 (40%)
Frame = +1
Query: 172 SSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDL 351
SS D VW L R N I Q GH + V S +G + S D R+WDL
Sbjct: 147 SSGFDSLARVWDL-RTARNILIFQ----GHIKQVLSVDFSPNGYHLASGGEDNQCRIWDL 201
Query: 352 AAGK 363
K
Sbjct: 202 RMRK 205
Score = 25.4 bits (53), Expect(2) = 0.37
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 207
L+GH VT + + + + ++S D+T +WK
Sbjct: 102 LKGHKEHVTDVVFSSVDDECLATASTDRTEKIWK 135
Score = 25.0 bits (52), Expect(2) = 0.37
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = +1
Query: 304 YALSASWDKTLRLWDLAAGKTTRRFEDHTK 393
+ S+ +D R+WDL + F+ H K
Sbjct: 144 FKASSGFDSLARVWDLRTARNILIFQGHIK 173
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice
sites at introns 4 and 6
Length = 1017
Score = 31.5 bits (68), Expect = 0.44
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 301 NYALSASWDKTLRLWDLAAGKTTRRFEDHTK 393
NY S+ +D ++LWD+ G+ F +H K
Sbjct: 767 NYLASSDYDGIVKLWDVTTGQAISHFIEHEK 797
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 31.5 bits (68), Expect = 0.44
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = +1
Query: 166 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLW 345
+ + S D T+ W L +D G + GH +S +V+ + Y S SWD T+RLW
Sbjct: 600 VYTGSGDNTIKAWSL-QD----GSLLCTMSGHKSVVSTLVVVNGVLY--SGSWDGTVRLW 652
Query: 346 DLA 354
L+
Sbjct: 653 SLS 655
>At1g17720.2 68414.m02194 serine/threonine protein phosphatase 2A
(PP2A) 55 kDa regulatory subunit B identical to type 2A
protein serine/threonine phosphatase 55 kDa B regulatory
subunit (GI:1408460) [Arabidopsis thaliana]; similar to
55 kDa B regulatory subunit of phosphatase 2A GI:710330;
contains Pfam PF00400: WD domain, G-beta repeat (5
copies, 3 weak)
Length = 500
Score = 31.5 bits (68), Expect = 0.44
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 271 ISDVVLSSDGNYALSASWDKTLRLWDL 351
ISD+ S DG Y LS + TL+LWD+
Sbjct: 332 ISDIKFSKDGRYILSRDY-MTLKLWDI 357
>At1g17720.1 68414.m02193 serine/threonine protein phosphatase 2A
(PP2A) 55 kDa regulatory subunit B identical to type 2A
protein serine/threonine phosphatase 55 kDa B regulatory
subunit (GI:1408460) [Arabidopsis thaliana]; similar to
55 kDa B regulatory subunit of phosphatase 2A GI:710330;
contains Pfam PF00400: WD domain, G-beta repeat (5
copies, 3 weak)
Length = 501
Score = 31.5 bits (68), Expect = 0.44
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 271 ISDVVLSSDGNYALSASWDKTLRLWDL 351
ISD+ S DG Y LS + TL+LWD+
Sbjct: 333 ISDIKFSKDGRYILSRDY-MTLKLWDI 358
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 31.1 bits (67), Expect = 0.58
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 235 IPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDL--AAGKTTRR 375
+ L GH+ + + S DG SA+ D+TLRLW++ KTT++
Sbjct: 363 VKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKK 411
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 6/51 (11%)
Frame = +1
Query: 256 GHSHFISDVVLSSDGNYALSASWDKTLRLWD--LAAGKTTR----RFEDHT 390
GH+ + + S G S D + +WD LA+ TR RFE+HT
Sbjct: 234 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHT 284
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 31.1 bits (67), Expect = 0.58
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 235 IPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDL--AAGKTTRR 375
+ L GH+ + + S DG SA+ D+TLRLW++ KTT++
Sbjct: 346 VKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKK 394
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 31.1 bits (67), Expect = 0.58
Identities = 26/92 (28%), Positives = 39/92 (42%)
Frame = +1
Query: 91 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 270
K + R H+ +V I +P I SS K +I T D+ + GH
Sbjct: 42 KFHSSHREHSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASED---GHKGS 98
Query: 271 ISDVVLSSDGNYALSASWDKTLRLWDLAAGKT 366
I V S D L+ S DK+ ++W++A T
Sbjct: 99 IYAVSWSPDSKRVLTVSADKSAKVWEVAEDGT 130
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 31.1 bits (67), Expect = 0.58
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Frame = +1
Query: 112 GHNGWVTQIATNPKYPD--MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 285
GH+ V +A +P PD ++S+S+D + L E I GH +
Sbjct: 9 GHSRPVVDVAYSPVTPDGFFLISASKDSNPM---LRNGETGDWIGT--FEGHKGAVWSCS 63
Query: 286 LSSDGNYALSASWDKTLRLWDLAAGKTTRRFE 381
L + A SAS D T ++W+ G FE
Sbjct: 64 LDKNAIRAASASADFTAKIWNALTGDELHSFE 95
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 30.7 bits (66), Expect = 0.77
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 301 NYALSASWDKTLRLWDLAAGKTTRRFEDHTK 393
N S S DK +++WD+A GK E H K
Sbjct: 228 NIVASGSEDKKVKVWDVATGKCKVTMEHHEK 258
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 30.7 bits (66), Expect = 0.77
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Frame = +1
Query: 55 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN--N 228
L KP S+ S L+G+ G ++ I+ N K ++ S+S + T ++W L + + N
Sbjct: 152 LLKP-SEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIIN 210
Query: 229 YGIPQKR----LYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLA-AGKTTRRFEDHTK 393
+ +R L + + + ++++SD + + TL+LWD+ R F H +
Sbjct: 211 FADSVRRRCSVLQWNPNVTTQIMVASDDDSS------PTLKLWDMRNIMSPVREFTGHQR 264
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 30.7 bits (66), Expect = 0.77
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Frame = +1
Query: 55 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN--N 228
L KP S+ S L+G+ G ++ I+ N K ++ S+S + T ++W L + + N
Sbjct: 152 LLKP-SEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIIN 210
Query: 229 YGIPQKR----LYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLA-AGKTTRRFEDHTK 393
+ +R L + + + ++++SD + + TL+LWD+ R F H +
Sbjct: 211 FADSVRRRCSVLQWNPNVTTQIMVASDDDSS------PTLKLWDMRNIMSPVREFTGHQR 264
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 30.7 bits (66), Expect = 0.77
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 253 YGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTR 372
+GH ++ + LS D N+ ++ S D T+ LW + T+R
Sbjct: 2665 FGHCAPVTCLALSPDNNFLVTGSRDSTVLLWRIHKAFTSR 2704
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 79 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 210
S+ K T GH VT +A +P + +++ SRD T+++W++
Sbjct: 2655 SDGAKTLETAFGHCAPVTCLALSPDN-NFLVTGSRDSTVLLWRI 2697
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 30.3 bits (65), Expect = 1.0
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +1
Query: 271 ISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRF 378
IS++ S++ ++ L +SWDK +RL+D++ F
Sbjct: 20 ISNLRFSNNSDHLLVSSWDKRVRLYDVSTNSLKGEF 55
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +1
Query: 259 HSHFISDVVLSSDGNYALSASWDKTLRLWD 348
H + V S ++ SWDKT++ WD
Sbjct: 97 HDKAVRCVEYSYAAGQVITGSWDKTVKCWD 126
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 256 GHSHFISDVVLSSDGNYALSASWDKTLRLWDLA 354
GH I V S DG L+ S DK+ ++WD++
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWDIS 262
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +1
Query: 94 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 258
LR RGH+ VT +A + ++ S S D + VWK++ E + G Q ++ G
Sbjct: 213 LRSLFRGHSQRVTDMAFFAEDVHLLASVSLDGKVFVWKIS--EGSEGDEQSQITG 265
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 30.3 bits (65), Expect = 1.0
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +1
Query: 256 GHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGK 363
GH+ ++ + S G + S S D ++R+W++ G+
Sbjct: 421 GHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGR 456
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 277 DVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHTKV 396
+ + DG Y LS S D TL W++ R+E++ V
Sbjct: 249 EATFTPDGKYVLSGSGDGTLHAWNIENPSEVARWENNIGV 288
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 154 YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY-GHSHFISDVVLSSDGNYALSASWDK 330
+P ++ SSR + R + Y R + GH + + +S + +S S D+
Sbjct: 77 HPSSLICSSRYNLESTGESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDR 136
Query: 331 TLRLWDL 351
++RLWDL
Sbjct: 137 SVRLWDL 143
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 8/43 (18%)
Frame = +1
Query: 106 LRGHNGWVTQIA------TNPKYPD--MILSSSRDKTLIVWKL 210
L+GH W+ + T + P+ M++SSS+DK + +WKL
Sbjct: 219 LKGHTDWIRSLDFSLPLHTTEEIPNSIMLVSSSQDKVIRIWKL 261
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +1
Query: 211 TRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLW 345
+++ N+ + QK GH ++DV + G Y LS S D+T R++
Sbjct: 399 SKESENWQM-QKVPSGHFAAVTDVTWARTGEYLLSVSQDQTTRVF 442
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 91 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRD 219
KL + H + + NP + +SSRDKT+ +W + D
Sbjct: 687 KLMAKVEAHKRIIWACSWNP-FGHQFATSSRDKTVKIWSVEND 728
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +1
Query: 238 PQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDL 351
P GHS I D+ S + N LSAS D ++RLW +
Sbjct: 348 PLHEFLGHSGDILDISWSKN-NRLLSASVDNSVRLWQI 384
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 115 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 216
HN +VT + NP D +S S D + +W ++
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 244 KRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDH 387
+ + H I + S DG Y SA D LR+W + + R E+H
Sbjct: 245 QEIQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDE---RCEEH 289
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +1
Query: 238 PQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDL 351
P GHS I D+ S + N LSAS D ++RLW +
Sbjct: 348 PLHEFLGHSGDILDISWSKN-NRLLSASVDNSVRLWQI 384
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 115 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 216
HN +VT + NP D +S S D + +W ++
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 244 KRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDH 387
+ + H I + S DG Y SA D LR+W + + R E+H
Sbjct: 245 QEIQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDE---RCEEH 289
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 244 KRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFE 381
K+L H ++ V ++DG+ LS S D+ + LWD F+
Sbjct: 49 KKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFD 94
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +1
Query: 250 LYGHSHFISDVVLSSDGNYALSASWDKTLRLWDL 351
L GH++ + + +S DG ++ + D+TLR W++
Sbjct: 461 LTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNV 494
Score = 29.1 bits (62), Expect = 2.4
Identities = 22/96 (22%), Positives = 42/96 (43%)
Frame = +1
Query: 103 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 282
T+ GH V +A ++ S SRDK+++ + E++ +L GH + +
Sbjct: 289 TMEGHRLRVGALAWGSS---VLSSGSRDKSILQRDIRCQEDHVS----KLAGHKSEVCGL 341
Query: 283 VLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDHT 390
S D S D L +W+ + + ++ +HT
Sbjct: 342 KWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHT 377
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 29.5 bits (63), Expect = 1.8
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = +1
Query: 79 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT-----RDENNYGIPQ 243
S L+L +L H V + + Y MI SSS D T+I+W L+ R N+ +P
Sbjct: 3311 SRRLRLEKSLCAHTAKVICLRVSQPYM-MIASSSDDCTVIIWDLSSLSFVRQLPNFSVPV 3369
Query: 244 KRLY 255
+Y
Sbjct: 3370 TVVY 3373
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 29.5 bits (63), Expect = 1.8
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Frame = +1
Query: 112 GHNGWVTQIATNPKYPD--MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 285
GH+ V + +P PD ++S+S+D + L E I GH +
Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSQPM---LRNGETGDWIGT--FEGHKGAVWSSC 68
Query: 286 LSSDGNYALSASWDKTLRLWDLAAGKTTRRFE 381
L ++ A SAS D + +LWD G FE
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFE 100
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/26 (42%), Positives = 21/26 (80%)
Frame = +1
Query: 271 ISDVVLSSDGNYALSASWDKTLRLWD 348
IS++ S++ ++ L +SWDK++RL+D
Sbjct: 19 ISNLRFSNNSDHLLVSSWDKSVRLYD 44
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +1
Query: 205 KLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRR 375
K+ R + N G + L H + V S ++ SWDKT++ WD T R
Sbjct: 79 KVRRIDFNAG-KEDVLGTHEKPVRCVEYSYAAGQVITGSWDKTIKCWDPRGASGTER 134
>At4g03970.1 68417.m00561 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At5g28170, At1g35110,
At1g44880, At3g42530, At4g19320, At5g36020, At3g43010,
At2g10350
Length = 1043
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +1
Query: 148 PKYPDMILSSSRDKTLIVWK-LTRDENNYGIPQ-KRLYGHSHFISDVVLSSDGNYALS-A 318
P D++L S KT+++WK LT + +PQ L + D ++ D N S A
Sbjct: 220 PGLLDLVLDDSTSKTILLWKRLTHPKQVISLPQIHALESNLKLPVDPLIVGDLNADQSWA 279
Query: 319 SWDKTLR 339
WD ++
Sbjct: 280 EWDDEVK 286
>At2g43945.1 68415.m05462 expressed protein
Length = 289
Score = 29.1 bits (62), Expect = 2.4
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Frame = -2
Query: 594 SREPDTI*RLSTEKATESTSSDF------YNTNTIFCLAK----AQNTGLLPRIGT*DYL 445
S+ P+ RLS+ S S F Y+ CL + +NT +L D++
Sbjct: 36 SKNPNFKRRLSSSSCCSSQSQLFSGRCRSYSRCVTMCLPEHMRNQENTEILTDKD--DHI 93
Query: 444 QCIISIYTLTKLRVLSHLSMVLESSGSLACSEI 346
+C++ + LR+ + ++E SGS+A SE+
Sbjct: 94 ECVLESDEDSGLRIPTQAQAIVEGSGSVAVSEL 126
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 29.1 bits (62), Expect = 2.4
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Frame = +1
Query: 112 GHNGWVTQIATNPKYPD--MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 285
GH+ V + +P PD ++S+S+D + L E I GH +
Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSHPM---LRNGETGDWIGT--FEGHKGAVWSSC 68
Query: 286 LSSDGNYALSASWDKTLRLWDLAAGKTTRRFE 381
L ++ A SAS D + +LWD G FE
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFE 100
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 29.1 bits (62), Expect = 2.4
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Frame = +1
Query: 112 GHNGWVTQIATNPKYPD--MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 285
GH+ V + +P PD ++S+S+D + L E I GH +
Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSHPM---LRNGETGDWIGT--FEGHKGAVWSSC 68
Query: 286 LSSDGNYALSASWDKTLRLWDLAAGKTTRRFE 381
L ++ A SAS D + +LWD G FE
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFE 100
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 235 IPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDL 351
+ L GH+ + + S DG SA+ D+TLR W++
Sbjct: 393 VKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 431
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 235 IPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDL 351
+ L GH+ + + S DG SA+ D+TLR W++
Sbjct: 383 VKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 421
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 244 KRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRRFEDH 387
KRL+ H S L+ S SWDKTL++W L+ K + H
Sbjct: 167 KRLW-IEHADSISCLAVHAGIIYSGSWDKTLKVWRLSDLKCLESIKAH 213
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +1
Query: 271 ISDVVLSSDGNYALSASWDKTLRLWD--LAAGKTTRRFED 384
+ ++V S +G Y L+ S D+T+R+++ L A + ED
Sbjct: 219 VKNIVFSRNGQYLLTNSHDRTIRIYENLLPAKNVLKSLED 258
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 271 ISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRR 375
I+ V S G+ L ++ DK+L LWD++ G+ R
Sbjct: 70 ITSVSWSKYGHRLLVSAADKSLTLWDVSTGEKIAR 104
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/45 (26%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 259 HSHFISDVVLSSDGNY--ALSASWDKTLRLWDLAAGKTTRRFEDH 387
H+ ++D+ S ++ DKT+++WD G FE H
Sbjct: 463 HAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGH 507
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/45 (26%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 259 HSHFISDVVLSSDGNY--ALSASWDKTLRLWDLAAGKTTRRFEDH 387
H+ ++D+ S ++ DKT+++WD G FE H
Sbjct: 463 HAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGH 507
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +1
Query: 259 HSHFISDVVLSSDGNY--ALSASWDKTLRLWDLAAGKTTRRFEDH 387
H ++D+ S+ ++ DKT+++WD A G FE H
Sbjct: 461 HVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGH 505
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/88 (25%), Positives = 40/88 (45%)
Frame = +1
Query: 85 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 264
T K T T +A +P+ ++I D T+ ++ + DE + +L GHS
Sbjct: 865 TFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDE-----VKSKLKGHS 919
Query: 265 HFISDVVLSSDGNYALSASWDKTLRLWD 348
I+ + S+ N +S+ D L +W+
Sbjct: 920 KRITGLAFSNVLNVLVSSGADAQLCVWN 947
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +1
Query: 259 HSHFISDVVLSSDGNY--ALSASWDKTLRLWDLAAGKTTRRFEDH 387
H ++D+ S+ ++ DKT+++WD A G FE H
Sbjct: 461 HVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGH 505
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/88 (25%), Positives = 40/88 (45%)
Frame = +1
Query: 85 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 264
T K T T +A +P+ ++I D T+ ++ + DE + +L GHS
Sbjct: 865 TFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDE-----VKSKLKGHS 919
Query: 265 HFISDVVLSSDGNYALSASWDKTLRLWD 348
I+ + S+ N +S+ D L +W+
Sbjct: 920 KRITGLAFSNVLNVLVSSGADAQLCVWN 947
>At5g60050.1 68418.m07530 PRLI-interacting factor-related contains
weak similarity to PRLI-interacting factor G
(GI:11139264) [Arabidopsis thaliana]
Length = 499
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 181 RDKTLIVWKLTRDENNYGIPQKRLYGHSH 267
R+ ++++KL R+E +Y + + LYG H
Sbjct: 271 REMKVLIFKLVREEADYDVSRDTLYGLCH 299
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 250 LYGHSHFISDVVLSSDGNYALSASWDKTLRLWDL 351
L GHS + + S DG ++ + D+TLR W++
Sbjct: 424 LTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNV 457
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +1
Query: 238 PQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWD 348
P L GH H + DV + + S D LR+WD
Sbjct: 9 PVAVLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWD 45
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/73 (20%), Positives = 31/73 (42%)
Frame = +1
Query: 169 LSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSASWDKTLRLWD 348
+S D ++++ L + I +K + +S + DG A +A WD +R+++
Sbjct: 278 ISGGADDKIVMYNLNHSTGSCTI-RKEITLERPGVSGTSIRVDGKIAATAGWDHRIRVYN 336
Query: 349 LAAGKTTRRFEDH 387
G + H
Sbjct: 337 YRKGNALAILKYH 349
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +1
Query: 247 RLYGHSHFISDVVLSSDGNYALSASWDKTLRLWDLAAG 360
+L GH ++ V +S G+ +S S D+ + LW+ +G
Sbjct: 50 KLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSG 87
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 28.3 bits (60), Expect = 4.1
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 301 NYALSASWDKTLRLWDLAAGKTTRRFEDHTK 393
NY S +D +++WD G+ ++ +H K
Sbjct: 779 NYLASTDYDGVVQIWDAGTGQGFSQYTEHQK 809
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/88 (25%), Positives = 40/88 (45%)
Frame = +1
Query: 85 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 264
T K T T +A +P+ ++I D T+ ++ + DE + +L GHS
Sbjct: 854 TFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDE-----VKSKLKGHS 908
Query: 265 HFISDVVLSSDGNYALSASWDKTLRLWD 348
I+ + S+ N +S+ D L +W+
Sbjct: 909 KRITGLAFSNVLNVLVSSGADAQLCVWN 936
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 325 DKTLRLWDLAAGKTTRRFEDH 387
DKT+++WD A G FE H
Sbjct: 485 DKTIKVWDAATGVKRYTFEGH 505
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/88 (25%), Positives = 40/88 (45%)
Frame = +1
Query: 85 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 264
T K T T +A +P+ ++I D T+ ++ + DE + +L GHS
Sbjct: 854 TFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDE-----VKSKLKGHS 908
Query: 265 HFISDVVLSSDGNYALSASWDKTLRLWD 348
I+ + S+ N +S+ D L +W+
Sbjct: 909 KRITGLAFSNVLNVLVSSGADAQLCVWN 936
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 325 DKTLRLWDLAAGKTTRRFEDH 387
DKT+++WD A G FE H
Sbjct: 485 DKTIKVWDAATGVKRYTFEGH 505
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/39 (25%), Positives = 21/39 (53%)
Frame = +1
Query: 259 HSHFISDVVLSSDGNYALSASWDKTLRLWDLAAGKTTRR 375
H +S V +++D + S+D T+ +WD+ +T +
Sbjct: 1045 HKDVVSCVAVTADSTILATGSYDTTVMVWDILRMRTPEK 1083
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 28.3 bits (60), Expect = 4.1
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Frame = +1
Query: 184 DKTLIVWKLTRDENNYG--IPQKR----LYGHSHFISDVVLSSDGNYALSASWDKTLRL 342
DK +VW + D N G +P K+ L + I+ + S DG Y LSA D +R+
Sbjct: 123 DKFGVVWVIELDGINDGKTLPSKKGALLLSHYCSIITSLEFSPDGRYILSADRDFKIRV 181
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +1
Query: 154 YPDMILSSSR---DKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSASW 324
+P ++ SSR D +L + L+ +N Y + GH + + L S G +S S
Sbjct: 86 HPTTVIYSSRNGWDDSLRL--LSLHDNKY---LRYFKGHHDRVVSLSLCSGGECFISGSL 140
Query: 325 DKTLRLWD 348
D+T+ LWD
Sbjct: 141 DRTVLLWD 148
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +1
Query: 154 YPDMILSSSR---DKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSASW 324
+P ++ SSR D +L + L+ +N Y + GH + + L S G +S S
Sbjct: 83 HPTTVIYSSRNGWDDSLRL--LSLHDNKY---LRYFKGHHDRVVSLSLCSGGECFISGSL 137
Query: 325 DKTLRLWD 348
D+T+ LWD
Sbjct: 138 DRTVLLWD 145
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 27.5 bits (58), Expect = 7.2
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +1
Query: 103 TLRGHNGWVTQIATNPKYPDM--ILSSSRDKTLIVWKLTRDENNYG-IPQKRLYGHSHFI 273
T+ GH+ V+ + K+ D ++SSS D TL +W L+ + P GH++
Sbjct: 699 TMIGHSKTVSYV----KFVDSSTLVSSSTDNTLKLWDLSMSASGINESPLHSFTGHTNLK 754
Query: 274 SDVVLSSDGNYALSAS 321
+ V LS Y + S
Sbjct: 755 NFVGLSVSDGYIATGS 770
>At3g02260.1 68416.m00207 auxin transport protein (BIG) nearly
identical to auxin transport protein; BIG [Arabidopsis
thaliana] GI:21779966; contains Pfam profiles PF02207:
Putative zinc finger in N-recognin, PF00569: Zinc
finger ZZ type
Length = 5098
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3
Query: 83 SDIFENGLKSDDSLKRQVR 27
SD+F L+SDDS+KR +R
Sbjct: 27 SDLFSRRLRSDDSIKRGLR 45
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 115 HNGWVTQIATNPKYPDMILSSSRDKTLIVW 204
H V I++NP P I + S D+TL VW
Sbjct: 209 HTMGVCCISSNPSDPYSIFTGSYDETLRVW 238
>At5g52260.1 68418.m06486 myb family transcription factor (MYB19)
contains PFAM profile: Myb DNA binding domain PF00249
Length = 268
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = -1
Query: 529 LLQHKHNLLPRKGTKHWSSASHRHLGLSSVHNQHLHPNKIKSSV 398
++ + N LP+ W S+S+ H+ SS H N+ + +
Sbjct: 175 MIMNNSNNLPKLFFSEWISSSNPHIDYSSAFTDSKHINETQDQI 218
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 27.1 bits (57), Expect = 9.5
Identities = 21/84 (25%), Positives = 31/84 (36%)
Frame = +1
Query: 97 RGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS 276
RG GH V +A P S D L++W + +K H +
Sbjct: 274 RGIYNGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVD 333
Query: 277 DVVLSSDGNYALSASWDKTLRLWD 348
D N L+ S D T+R++D
Sbjct: 334 --WNPHDNNLILTGSADNTVRVFD 355
>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to guanine nucleotide-binding protein beta 5
(GI:1001939) [Mesocricetus auratus]
Length = 425
Score = 27.1 bits (57), Expect = 9.5
Identities = 24/104 (23%), Positives = 42/104 (40%), Gaps = 1/104 (0%)
Frame = +1
Query: 43 RESSLFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 222
R L +P + L+ G G ++ +A +P M+ S +T +++ E
Sbjct: 187 RVFDLHRPGRDFRQYSTLQKNKEGQAGILSTLAFSPTNSGMLAVGSYGQTTGIYREDNME 246
Query: 223 NNYGIPQKRLYGHSHFISDVVLSSDGNYALSAS-WDKTLRLWDL 351
Y L+G ++ V S DGNY + D + WD+
Sbjct: 247 LLYV-----LHGQEGGVTHVQFSKDGNYLYTGGRKDPYILCWDI 285
>At3g42530.1 68416.m04410 Ulp1 protease family similar to At5g28170,
At1g35110, At1g44880, At4g19320, At5g36020, At4g03970,
At3g43010, At2g10350; contains Pfam profile PF02902:
Ulp1 protease family, C-terminal catalytic domain
Length = 889
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +1
Query: 148 PKYPDMILSSSRDKTLIVWK-LTRDENNYGIPQ-KRLYGHSHFISDVVLSSDGNYALS-A 318
P D++L S KT++ WK LT + +PQ L + D ++ D N S A
Sbjct: 241 PGLLDLLLDDSTSKTILHWKRLTHPKQVISLPQIHALESNLKLPVDPLIVGDLNADQSWA 300
Query: 319 SWDKTLR 339
WD ++
Sbjct: 301 EWDDEVK 307
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 27.1 bits (57), Expect = 9.5
Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Frame = +1
Query: 112 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 291
GH I +P +LS + +W+ ++ + GH+ + D+ S
Sbjct: 221 GHKDEGYAIDWSPATAGRLLSGDCKSMIHLWEPA--SGSWAVDPIPFAGHTASVEDLQWS 278
Query: 292 -SDGNYALSASWDKTLRLWDLAAGKT 366
++ N S S D ++ +WD+ GK+
Sbjct: 279 PAEENVFASCSVDGSVAVWDIRLGKS 304
>At1g44880.1 68414.m05142 Ulp1 protease family protein similar to
At5g28170, At1g35110, At3g42530, At4g19320, At5g36020,
At4g03970, At3g43010, At2g10350; contains Pfam profile
PF02902: Ulp1 protease family, C-terminal catalytic
domain
Length = 1038
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +1
Query: 148 PKYPDMILSSSRDKTLIVWK-LTRDENNYGIPQ-KRLYGHSHFISDVVLSSDGNYALS-A 318
P D++L S KT+++WK LT + PQ L + D ++ D N S A
Sbjct: 278 PGLLDLVLDDSTSKTILLWKRLTHPKQVISHPQIHALESNLKLPVDPLIVGDLNADQSWA 337
Query: 319 SWDKTLR 339
WD ++
Sbjct: 338 EWDDEVK 344
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,006,971
Number of Sequences: 28952
Number of extensions: 265208
Number of successful extensions: 1364
Number of sequences better than 10.0: 193
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1286
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1187288784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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