Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0715
(582 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25799| Best HMM Match : DUF618 (HMM E-Value=2e-26) 33 0.13
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 33 0.13
SB_57911| Best HMM Match : Drf_FH1 (HMM E-Value=2.3) 31 0.91
SB_25368| Best HMM Match : PID (HMM E-Value=2.7e-22) 31 0.91
SB_45927| Best HMM Match : WD40 (HMM E-Value=9e-18) 29 2.1
SB_43374| Best HMM Match : 7tm_2 (HMM E-Value=5.4) 29 2.8
SB_2284| Best HMM Match : Hormone_5 (HMM E-Value=0.46) 28 4.8
SB_51217| Best HMM Match : TUDOR (HMM E-Value=0) 28 4.8
SB_38370| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_5702| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_33219| Best HMM Match : RhoGAP (HMM E-Value=0.0014) 28 6.4
SB_42709| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27) 27 8.5
SB_6111| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
>SB_25799| Best HMM Match : DUF618 (HMM E-Value=2e-26)
Length = 687
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +2
Query: 359 PPHQPHRPRGDEREG--SEAADDEPLGLRRPASTVPRRAGTTPPVPRARPLPGQ 514
PPH+P RP D+R + P G R S P G PP+ RP PG+
Sbjct: 458 PPHEPGRPSFDQRRPPYDQGRPGMPPGPRHDQSRPPLDEG-RPPLDPGRPGPGR 510
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +2
Query: 359 PPHQPHRPRGDEREG--SEAADDEPLGLRRPASTVPRRAGTTPPVPRARPLPGQ 514
PPH+P RP D+R + P G R S P G PP+ RP PG+
Sbjct: 224 PPHEPGRPSFDQRRPPYDQGRPGMPPGPRHDQSRPPLDEG-RPPLDPGRPGPGR 276
>SB_57911| Best HMM Match : Drf_FH1 (HMM E-Value=2.3)
Length = 169
Score = 30.7 bits (66), Expect = 0.91
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +2
Query: 356 PPPHQPHRPRGDEREGSEAADDEPLGLRRPASTVPRRAGTTPPVPRARPLP 508
PP RP D+R SE+ P R P+ + PR PP +RP P
Sbjct: 30 PPSESRPRPPYDDRPPSESRPRPPYDERPPSESRPRPPYERPP-SESRPRP 79
>SB_25368| Best HMM Match : PID (HMM E-Value=2.7e-22)
Length = 1197
Score = 30.7 bits (66), Expect = 0.91
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 3/47 (6%)
Frame = +2
Query: 377 RPRGDEREGSEAADDEPLGLRRPASTVPRRAG---TTPPVPRARPLP 508
RP E D PL P PR G + PP PR RPLP
Sbjct: 834 RPDSLTMEAPTTKTDRPLSPSAPPPLPPRPVGAPPSLPPRPRTRPLP 880
>SB_45927| Best HMM Match : WD40 (HMM E-Value=9e-18)
Length = 1764
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2
Query: 65 AAGCHSPVSLLALCLLAHHYRHCNTLIATFGDL 163
A GC P+SL+AL L A RH N +++ GD+
Sbjct: 1698 ALGCEQPLSLVALRLQA---RHMNAVMSDTGDI 1727
>SB_43374| Best HMM Match : 7tm_2 (HMM E-Value=5.4)
Length = 168
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2
Query: 308 PQSDAFHALRARLHCLP 358
PQSDAF LR RL C+P
Sbjct: 141 PQSDAFTTLRHRLDCVP 157
>SB_2284| Best HMM Match : Hormone_5 (HMM E-Value=0.46)
Length = 1266
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -1
Query: 558 QGAVSAATSRACRTACPGSGRARGTGGVVPARR 460
Q A+ R C A GSG R T G ARR
Sbjct: 815 QSEERVASCRRCAAAAGGSGAERATAGTALARR 847
>SB_51217| Best HMM Match : TUDOR (HMM E-Value=0)
Length = 652
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 326 HALRARLHCLPPPHQPHRPRGDEREGSEAADD 421
+ +++ L LP QPH P G E++ S++A D
Sbjct: 209 NGVKSALSVLPGNGQPHSPSGAEQQPSDSAFD 240
>SB_38370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 240
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -1
Query: 558 QGAVSAATSRACRTACPGSGRARGTGGVVPARR 460
Q A+ R C A G G R G PARR
Sbjct: 207 QSEERVASCRRCAAAAGGPGAERAAAGTAPARR 239
>SB_5702| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 217
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +2
Query: 338 ARLHCLPPPHQPHRPRGDEREGSEAADDEPLGLR 439
AR L PP QPHR + G PLG R
Sbjct: 45 ARQFILTPPQQPHRLKTQNHYGYPVYGSLPLGYR 78
>SB_33219| Best HMM Match : RhoGAP (HMM E-Value=0.0014)
Length = 399
Score = 27.9 bits (59), Expect = 6.4
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = +2
Query: 356 PPPHQPHRPRGDEREGSEAADDEPLGLRRPASTVPRRAGTTPPVPRARPLPGQAVRQALL 535
P P P + + ++A DE + ++P S A PP RP P VR+ +
Sbjct: 181 PLPSLPPKKKISNDTSNDAKFDEIIDDKKPMSAKSYPAPAPPP----RPCPAPRVRKTIP 236
Query: 536 VAADTAP 556
+ D+ P
Sbjct: 237 SSTDSLP 243
>SB_42709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1616
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +2
Query: 434 LRRPASTVPRRAGTTPPVPRARPLPGQAVRQALLVAADTAPCTLSS 571
L RP T+P TTP P A P G R +L+ P S+
Sbjct: 1224 LVRPLETIPAPTPTTPTSP-ATPASGPLTRTPILLKKTPTPALESA 1268
>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3176
Score = 27.5 bits (58), Expect = 8.5
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +2
Query: 377 RPRGDEREGSEAAD-DEPLGLRRPASTVPRRAGTTPPVPRARPLPGQAVRQALLVAADTA 553
R +ERE E + D P+ ST PR TT VP+ PL + A+
Sbjct: 1732 RREAEERELQERVERDSPVRCTAVTSTSPRYGITTGLVPKPPPLMPITGTKTSQEASPKP 1791
Query: 554 PCTLS 568
P LS
Sbjct: 1792 PAVLS 1796
>SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27)
Length = 522
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +2
Query: 434 LRRPASTVPRRAGTTPPVPRARPLPGQAVRQALLVAADTAPCTLSS 571
L RP T+P A TTP P A P G +R + + P S+
Sbjct: 420 LVRPLETIPAPAPTTPTSP-ATPASGPPIRTPIPLKETPTPALESA 464
>SB_6111| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 366
Score = 27.5 bits (58), Expect = 8.5
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = -1
Query: 291 PNSAARRPALCSPTSSRRR*ANMGNSMSCTSLSTSVRNSTVISRSPK 151
P A RP S S R R N G S S S ++ST SPK
Sbjct: 300 PLVAKTRPGTSSSFSFRSRSLNFGRKTSTNSSHKSSQHSTKSQGSPK 346
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,302,362
Number of Sequences: 59808
Number of extensions: 260821
Number of successful extensions: 1093
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1397989795
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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