Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0715
(582 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75712-4|CAB00043.1| 694|Caenorhabditis elegans Hypothetical pr... 74 9e-14
Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical pr... 34 0.085
Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical pr... 34 0.085
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical p... 31 0.60
U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying defe... 31 0.60
U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying defe... 31 0.60
AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-ty... 31 0.60
AC024810-10|AAF60767.1| 165|Caenorhabditis elegans Hypothetical... 29 1.8
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 29 2.4
Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z46791-2|CAA86756.1| 283|Caenorhabditis elegans Hypothetical pr... 28 4.2
AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical ... 28 4.2
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 28 4.2
AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical ... 28 4.2
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 28 5.6
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 28 5.6
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 28 5.6
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 27 7.4
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 27 7.4
AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical ... 27 7.4
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 27 9.7
>Z75712-4|CAB00043.1| 694|Caenorhabditis elegans Hypothetical
protein K04G2.6 protein.
Length = 694
Score = 73.7 bits (173), Expect = 9e-14
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Frame = +2
Query: 83 PVSLLALCLLAHHYRHCNTLIATFGDLEITVEFLTEVDKLVQLIELPIFAYLRLELVGE- 259
P++LL LCLL+ HY+ + ++ITV+ L E+DKLV L+E P+ AY+R++L+
Sbjct: 543 PIALLGLCLLSQHYQQAADIALLLSQVDITVDVLLEIDKLVNLVESPVLAYVRMDLLSSI 602
Query: 260 HSXXXXXXXXXXXXXXPQSDAFHALRARLHCLP 358
H PQS+AF L RL +P
Sbjct: 603 HRPPLCTVLSALLMLLPQSEAFVTLHKRLQAVP 635
>Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical
protein M01A8.2b protein.
Length = 869
Score = 33.9 bits (74), Expect = 0.085
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +2
Query: 332 LRARLHCLPPPHQPHRPRGDEREGSEAADDEPLGL-RRPASTVPRRAGT--TPPVPRAR 499
+++R+ LPPP P P+ + +EG E + + + P TV +A T TPPV R +
Sbjct: 326 IKSRVSLLPPP-APKAPQKENKEGGEMTETPRRTITKTPLKTVNAKAKTSPTPPVERQK 383
>Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical
protein M01A8.2a protein.
Length = 937
Score = 33.9 bits (74), Expect = 0.085
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +2
Query: 332 LRARLHCLPPPHQPHRPRGDEREGSEAADDEPLGL-RRPASTVPRRAGT--TPPVPRAR 499
+++R+ LPPP P P+ + +EG E + + + P TV +A T TPPV R +
Sbjct: 394 IKSRVSLLPPP-APKAPQKENKEGGEMTETPRRTITKTPLKTVNAKAKTSPTPPVERQK 451
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 32.7 bits (71), Expect = 0.20
Identities = 21/52 (40%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = +2
Query: 356 PPPHQPHRPRGDEREGSEAADDEPLGLRR---PASTVPRRAGTTPPVPRARP 502
PPP P PR GS P + R P S PRR TPP P+ RP
Sbjct: 122 PPPPPP--PRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRP 171
>Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical
protein M163.11 protein.
Length = 224
Score = 31.1 bits (67), Expect = 0.60
Identities = 28/83 (33%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Frame = -1
Query: 333 SAWKASDCGSSMSRPNSAARRPALCSPTSSRRR*ANMGNSMSCTSLS--TSVRNSTVISR 160
S+ +S SS S +S+ A S T+S NS S TS S TSV +ST S
Sbjct: 68 SSSSSSSSSSSASSTSSSDTTTADSSSTTSSDSSTTSSNSSSSTSSSDSTSVVSSTSSST 127
Query: 159 SPKVAMSVLQCR*WCASRHSASS 91
+ S C W A+ SS
Sbjct: 128 TTTCVDSFSTCTSWAANGFCTSS 150
>U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying
defective protein 19,isoform a protein.
Length = 1783
Score = 31.1 bits (67), Expect = 0.60
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +2
Query: 392 EREGSEAADDEPLGLRRPASTVPRRAGTTPPVPRARPLP 508
E EG E DEP G S PRR P +P+P
Sbjct: 735 EDEGEEHGMDEPEGDEEMTSARPRRMSEVPAASTVKPIP 773
>U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying
defective protein 19,isoform b protein.
Length = 1877
Score = 31.1 bits (67), Expect = 0.60
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +2
Query: 392 EREGSEAADDEPLGLRRPASTVPRRAGTTPPVPRARPLP 508
E EG E DEP G S PRR P +P+P
Sbjct: 735 EDEGEEHGMDEPEGDEEMTSARPRRMSEVPAASTVKPIP 773
>AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-type
calcium channelalpha 1 subunit protein.
Length = 1783
Score = 31.1 bits (67), Expect = 0.60
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +2
Query: 392 EREGSEAADDEPLGLRRPASTVPRRAGTTPPVPRARPLP 508
E EG E DEP G S PRR P +P+P
Sbjct: 735 EDEGEEHGMDEPEGDEEMTSARPRRMSEVPAASTVKPIP 773
>AC024810-10|AAF60767.1| 165|Caenorhabditis elegans Hypothetical
protein Y54E10A.13 protein.
Length = 165
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = -1
Query: 333 SAWKASDCGSSMSRPNSAARRPALCSPTSSRRR*ANMGNSMSCTSLSTSVRNSTV 169
SA ++S C S+ RP+S + R PT+S A G+ + +S S+S++ S +
Sbjct: 86 SATRSSHCSVSLPRPSSPSIRSNSSVPTASGG--ARNGSPSTRSSTSSSIQGSPI 138
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +2
Query: 356 PPPHQPHRPRGDEREGSEAADDEPLGLRRPASTVPRRAGTTPPVPRARPLPG 511
PPP P PR + +E A +R+P ++P T PP P P G
Sbjct: 26 PPPAPPALPRELTQISTETAAAVAALVRKPPPSLP--PSTMPPGPHGMPFMG 75
>Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical
protein F47B8.5 protein.
Length = 579
Score = 28.3 bits (60), Expect = 4.2
Identities = 19/55 (34%), Positives = 20/55 (36%)
Frame = +2
Query: 392 EREGSEAADDEPLGLRRPASTVPRRAGTTPPVPRARPLPGQAVRQALLVAADTAP 556
E E + AA EP PA P P P P P A A A D AP
Sbjct: 472 EGEAAPAAPAEPAPAPAPAPA-PAPEAAPAPEPAPAPAPAPAPEAAPAAAPDAAP 525
>Z46791-2|CAA86756.1| 283|Caenorhabditis elegans Hypothetical
protein C09G5.3 protein.
Length = 283
Score = 28.3 bits (60), Expect = 4.2
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 7/78 (8%)
Frame = +2
Query: 344 LHCLPPPHQPHRPRGDEREGSEAADDEPLGL--RRPASTVPRRAGTT----PPVPRARP- 502
+ C P P P P+G+E + +D G+ A P ++G P P P
Sbjct: 134 IKCPPGPRGPPGPQGEEGPSGDVGEDGEPGVPGNDGADGTPGKSGAPGGKGPQGPPGTPG 193
Query: 503 LPGQAVRQALLVAADTAP 556
PGQ R+A+ A P
Sbjct: 194 RPGQPGRKAIGEAGPKGP 211
>AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical
protein Y48B6A.6b protein.
Length = 533
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 398 EGSEAADDEPLGLRRPASTVPRRAGTTPPVPRARPLPGQAVRQA 529
E EA+DD RP++ P R + PP P +P A+R+A
Sbjct: 383 EAQEASDD------RPSAPTPIRDSSLPPPPPPKPETPLAIRRA 420
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 398 EGSEAADDEPLGLRRPASTVPRRAGTTPPVPRARPLPGQAVRQA 529
E EA+DD RP++ P R + PP P +P A+R+A
Sbjct: 383 EAQEASDD------RPSAPTPIRDSSLPPPPPPKPETPLAIRRA 420
>AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical
protein F52G3.1 protein.
Length = 1172
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 419 DEPLGLRRPASTVPRRAGTTPPVPRARPLPGQAVRQALLVAAD 547
D P G P T +A PP P P P +R + LVAA+
Sbjct: 89 DNPNGAAEPPQTPTNQAPAVPPPP--PPQPANDLRPSWLVAAN 129
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 377 RPRGDEREGSEAADDEPLGLRRPASTVPRRAGTTPPVPRAR 499
+PRG++R GS + RR + T PRR + R+R
Sbjct: 75 KPRGNDRHGSRSPRRRSRSPRRRSRTPPRRRSRSRDRKRSR 115
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 377 RPRGDEREGSEAADDEPLGLRRPASTVPRRAGTTPPVPRAR 499
+PRG++R GS + RR + T PRR + R+R
Sbjct: 75 KPRGNDRHGSRSPRRRSRSPRRRSRTPPRRRSRSRDRKRSR 115
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 377 RPRGDEREGSEAADDEPLGLRRPASTVPRRAGTTPPVPRAR 499
+PRG++R GS + RR + T PRR + R+R
Sbjct: 75 KPRGNDRHGSRSPRRRSRSPRRRSRTPPRRRSRSRDRKRSR 115
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 27.5 bits (58), Expect = 7.4
Identities = 18/65 (27%), Positives = 23/65 (35%)
Frame = +2
Query: 308 PQSDAFHALRARLHCLPPPHQPHRPRGDEREGSEAADDEPLGLRRPASTVPRRAGTTPPV 487
PQ+ + R H +PPP P P+ +A P P AG PP
Sbjct: 593 PQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPP 652
Query: 488 PRARP 502
P P
Sbjct: 653 PPPPP 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 27.5 bits (58), Expect = 7.4
Identities = 18/65 (27%), Positives = 23/65 (35%)
Frame = +2
Query: 308 PQSDAFHALRARLHCLPPPHQPHRPRGDEREGSEAADDEPLGLRRPASTVPRRAGTTPPV 487
PQ+ + R H +PPP P P+ +A P P AG PP
Sbjct: 419 PQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPP 478
Query: 488 PRARP 502
P P
Sbjct: 479 PPPPP 483
>AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical
protein Y37H9A.3 protein.
Length = 792
Score = 27.5 bits (58), Expect = 7.4
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Frame = +2
Query: 353 LPPPH---QP--HRPRGDEREGSEAADDEPLGLRRPASTVPRRAGTTPPVPRARPLPGQA 517
LPPP QP H P R+ + AA+ P + + S+ P PP + P +A
Sbjct: 205 LPPPAPTAQPAHHPPAPPIRQAAHAAESSPPPIPQRKSSAPAPTAAAPPATKEPTDPKKA 264
Query: 518 VRQALL 535
+L
Sbjct: 265 AIYRIL 270
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 27.1 bits (57), Expect = 9.7
Identities = 18/63 (28%), Positives = 26/63 (41%)
Frame = +2
Query: 383 RGDEREGSEAADDEPLGLRRPASTVPRRAGTTPPVPRARPLPGQAVRQALLVAADTAPCT 562
RG G+ A D P+ RP+ + PRR +P PR RQ + +P
Sbjct: 70 RGSPPRGARADRDRPM---RPSPSPPRRRRPSPSPPRRDRRDRSGSRQRRRASPRRSPAA 126
Query: 563 LSS 571
S+
Sbjct: 127 RSA 129
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,868,069
Number of Sequences: 27780
Number of extensions: 173322
Number of successful extensions: 882
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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