Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0715
(582 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g01690.2 68415.m00097 expressed protein 82 3e-16
At2g01690.1 68415.m00096 expressed protein 82 3e-16
At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t... 31 0.42
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 31 0.74
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 31 0.74
At1g63480.1 68414.m07178 DNA-binding family protein contains a A... 29 2.3
At1g72740.1 68414.m08411 DNA-binding family protein / histone H1... 29 3.0
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 29 3.0
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 29 3.0
At3g44750.1 68416.m04817 histone deacetylase, putative (HD2A) co... 28 5.2
At3g24340.1 68416.m03056 SNF2 domain-containing protein / helica... 28 5.2
At2g44710.1 68415.m05564 RNA recognition motif (RRM)-containing ... 28 5.2
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 28 5.2
At1g18620.1 68414.m02321 expressed protein 28 5.2
At2g33320.1 68415.m04084 C2 domain-containing protein low simila... 27 6.9
At4g27850.1 68417.m03999 proline-rich family protein contains pr... 27 9.1
At2g31270.1 68415.m03818 hydroxyproline-rich glycoprotein family... 27 9.1
At1g77740.1 68414.m09051 1-phosphatidylinositol-4-phosphate 5-ki... 27 9.1
At1g01830.1 68414.m00102 armadillo/beta-catenin repeat family pr... 27 9.1
>At2g01690.2 68415.m00097 expressed protein
Length = 744
Score = 81.8 bits (193), Expect = 3e-16
Identities = 39/97 (40%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
Frame = +2
Query: 74 CHSPVSLLALCLLAHHYRHCNTLIATFGDLEITVEFLTEVDKLVQLIELPIFAYLRLELV 253
CHSP+++++LCLLA Y+H + +I + + +I V+FL ++DKL++L+E PIF YLRL+L+
Sbjct: 514 CHSPMAIISLCLLAQAYQHASVVIQSLVEEDINVKFLVQLDKLIRLLETPIFTYLRLQLL 573
Query: 254 --GEHSXXXXXXXXXXXXXXPQSDAFHALRARLHCLP 358
G ++ QS AF LR RL +P
Sbjct: 574 EPGRYTWLLKTLYGLLMLLPQQSAAFKILRTRLKTVP 610
>At2g01690.1 68415.m00096 expressed protein
Length = 743
Score = 81.8 bits (193), Expect = 3e-16
Identities = 39/97 (40%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
Frame = +2
Query: 74 CHSPVSLLALCLLAHHYRHCNTLIATFGDLEITVEFLTEVDKLVQLIELPIFAYLRLELV 253
CHSP+++++LCLLA Y+H + +I + + +I V+FL ++DKL++L+E PIF YLRL+L+
Sbjct: 513 CHSPMAIISLCLLAQAYQHASVVIQSLVEEDINVKFLVQLDKLIRLLETPIFTYLRLQLL 572
Query: 254 --GEHSXXXXXXXXXXXXXXPQSDAFHALRARLHCLP 358
G ++ QS AF LR RL +P
Sbjct: 573 EPGRYTWLLKTLYGLLMLLPQQSAAFKILRTRLKTVP 609
>At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
hydroxyproline-rich glycoprotein DZ-HRGP from Volvox
carteri f. nagariensis GP|6523547; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 375
Score = 31.5 bits (68), Expect = 0.42
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +2
Query: 356 PPPHQPHRPRGDEREGSEAADDEPLGLRRPASTVPRRAGTTPPVPRARPLP 508
PP P P + + A+D+P P ST P TTPP +PLP
Sbjct: 46 PPQPDPQPPTPPTFQPAPPANDQPPP--PPQSTSPPPVATTPPALPPKPLP 94
Score = 27.1 bits (57), Expect = 9.1
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = +2
Query: 353 LPPPHQPHRPRGDEREGSEAADDEPLGLRRPASTVPRRAGTTPPVPRARPLP 508
L PP P A PL PA T P TTPP +PLP
Sbjct: 97 LSPPQTTPPPPPAITPPPPPAITPPLSPPPPAITPPPPLATTPPALPPKPLP 148
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 30.7 bits (66), Expect = 0.74
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 73 VPQPRVAAGAVSAGAPLPALQHAHRHLRRPRDNRGV 180
VP P V+ G ++ GA P++Q A +H R P N V
Sbjct: 260 VPHPAVSGGPIALGA--PSIQAALKHPRTPPSNSAV 293
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 30.7 bits (66), Expect = 0.74
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 73 VPQPRVAAGAVSAGAPLPALQHAHRHLRRPRDNRGV 180
VP P V+ G ++ GA P++Q A +H R P N V
Sbjct: 260 VPHPAVSGGPIALGA--PSIQAALKHPRTPPSNSAV 293
>At1g63480.1 68414.m07178 DNA-binding family protein contains a AT
hook motif (DNA binding motifs with a preference for A/T
rich regions), Pfam:PF02178
Length = 361
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/59 (28%), Positives = 22/59 (37%)
Frame = +2
Query: 356 PPPHQPHRPRGDEREGSEAADDEPLGLRRPASTVPRRAGTTPPVPRARPLPGQAVRQAL 532
PPP P P + G EP+ + + P P R RP PG +Q L
Sbjct: 88 PPPPPPEEPMVKRKRGRPRKYGEPMVSNKSRDSSPMSDPNEPKRARGRP-PGTGRKQRL 145
>At1g72740.1 68414.m08411 DNA-binding family protein / histone H1/H5
family protein similar to DNA-binding protein PcMYB1
[Petroselinum crispum] GI:2224897; contains Pfam
profiles PF00538: linker histone H1 and H5 family,
PF00249: Myb-like DNA-binding domain
Length = 287
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +2
Query: 419 DEPLGLRRPASTVPRRAGTTPPVPRARPLPGQAV 520
D P A T+PR T PP P R LP + +
Sbjct: 79 DTPAADANDAVTIPRPIPTIPPPPGRRTLPSELI 112
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 73 VPQPRVAAGAVSAGAPLPALQHAHRHLRRPRDN 171
VP P V+AGA++ G P++ A +H R P N
Sbjct: 260 VPHPAVSAGAIALGG--PSIPAALKHPRTPPTN 290
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 73 VPQPRVAAGAVSAGAPLPALQHAHRHLRRPRDN 171
VP P V+AGA++ G P++ A +H R P N
Sbjct: 260 VPHPAVSAGAIALGG--PSIPAALKHPRTPPTN 290
>At3g44750.1 68416.m04817 histone deacetylase, putative (HD2A)
contains Pfam domain, PF00096: Zinc finger, C2H2 type;
identical to cDNA putative histone deacetylase (HD2A)
GI:11066134
Length = 245
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 389 DEREGSEAADDEPLGLRRPASTVPRRAGTTPPVP 490
D+ +G ++ ++EP ++PAS+ R TTP P
Sbjct: 151 DDSDGEDSEEEEPTP-KKPASSKKRANETTPKAP 183
>At3g24340.1 68416.m03056 SNF2 domain-containing protein / helicase
domain-containing protein similar to SP|P41410 DNA
repair protein rhp54 (RAD54 homolog)
{Schizosaccharomyces pombe}; contains PFam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain
Length = 1132
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Frame = -3
Query: 253 HQLQ--AQVGEYGQLNELHQLVHLRQELHGYLEVAEG 149
H+L +Q GE+G++NE +++V L+ + ++ V EG
Sbjct: 806 HELSKCSQEGEHGRVNEENRIVDLKAMIAHFVHVHEG 842
>At2g44710.1 68415.m05564 RNA recognition motif (RRM)-containing
protein
Length = 809
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 440 RPASTVPRRAGTTPPVPRARPLPGQA 517
RP P RA PP RARP+P A
Sbjct: 540 RPPLPPPARARPLPPPARARPMPPPA 565
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 27.9 bits (59), Expect = 5.2
Identities = 18/68 (26%), Positives = 24/68 (35%)
Frame = +2
Query: 356 PPPHQPHRPRGDEREGSEAADDEPLGLRRPASTVPRRAGTTPPVPRARPLPGQAVRQALL 535
PP QP P + +P +P P TPP P+ +P P + A
Sbjct: 35 PPKPQPKPPPAPSPSPCPSPPPKP----QPKPVPPPACPPTPPKPQPKPAPPPEPKPAPP 90
Query: 536 VAADTAPC 559
A PC
Sbjct: 91 PAPKPVPC 98
>At1g18620.1 68414.m02321 expressed protein
Length = 978
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +2
Query: 368 QPHRPRGDEREGSEAADDEPLGLRRPASTVPRRAGTTPPVPRARPLPGQAVRQ 526
Q +P D+R A+ + LR+ S P + T+P R+RP ++++Q
Sbjct: 565 QQMKPEHDKRSRPPASPSDSSKLRKQISRQPVESTTSPGGRRSRPRDQRSLQQ 617
>At2g33320.1 68415.m04084 C2 domain-containing protein low
similarity to splicing coactivator subunit SRm300 [Homo
sapiens] GI:6649242; contains Pfam profile PF00168: C2
domain
Length = 602
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +2
Query: 359 PPHQPHRPRGDEREGSEAADDEPLGLRRPASTVPRRAGTTPPVPRARP 502
P H RPR + + + D P + PRR +TP + + RP
Sbjct: 300 PNHNVLRPRSERQHEPDFIDQSPFRSNDRSRKTPRR--STPMIEKPRP 345
>At4g27850.1 68417.m03999 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 577
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/50 (30%), Positives = 18/50 (36%)
Frame = +2
Query: 353 LPPPHQPHRPRGDEREGSEAADDEPLGLRRPASTVPRRAGTTPPVPRARP 502
LPPP P G + D PL L P + G P+P P
Sbjct: 174 LPPPPSPSPTPGPDSPLPSPGPDSPLPLPGPPPSPSPTPGPDSPLPSPGP 223
>At2g31270.1 68415.m03818 hydroxyproline-rich glycoprotein family
protein
Length = 571
Score = 27.1 bits (57), Expect = 9.1
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = -1
Query: 309 GSSMSRPNSAARRPALCSPTSSRRR*ANMGNSMSCTSLSTSVRNSTVISRSPKVAMSVLQ 130
GSS S P + +R + SP+S + +S++ + + N SR+ VA+SV +
Sbjct: 5 GSSRSIPFKSKKRLVMDSPSSKSQTGNPNPSSVALPTPEKPLENMLSRSRNRSVALSVKE 64
Query: 129 CR*WCASR 106
R SR
Sbjct: 65 IRQAAGSR 72
>At1g77740.1 68414.m09051 1-phosphatidylinositol-4-phosphate
5-kinase, putative / PIP kinase, putative /
PtdIns(4)P-5-kinase, putative / diphosphoinositide
kinase, putative strong similarity to
phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
[Arabidopsis thaliana] GI:3702691; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF02493: MORN repeat
Length = 754
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
Frame = +2
Query: 383 RGDEREGSEAADD------EPLGLRRPASTVPRRAGTTPPVPRARPLP 508
RGDE + E DD P+ + T R T PPV +PLP
Sbjct: 30 RGDEEKTEERRDDLLLLALTPMVRSKSQGTTRRVTPTPPPVDVEKPLP 77
>At1g01830.1 68414.m00102 armadillo/beta-catenin repeat family
protein armadillo/beta-catenin-like repeats,
Pfam:PF00514
Length = 574
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -1
Query: 555 GAVSAATSRACRTAC-PGSGRARGTGGVVP 469
GA AA S CR AC P + R G G +P
Sbjct: 429 GAQQAAASAICRFACSPETKRLVGESGCIP 458
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,423,502
Number of Sequences: 28952
Number of extensions: 158077
Number of successful extensions: 721
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1141585696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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