Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0714
         (588 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069288-1|AAL39433.1|  477|Drosophila melanogaster GM14349p pro...    88   7e-18
AE014297-4508|AAF56990.1|  477|Drosophila melanogaster CG7920-PA...    88   7e-18
AE014297-4509|AAN14206.1|  104|Drosophila melanogaster CG7920-PB...    38   0.013
AY089394-1|AAL90132.1|  250|Drosophila melanogaster AT21920p pro...    29   6.2  
AE013599-2228|AAF58034.2|  250|Drosophila melanogaster CG15708-P...    29   6.2  

>AY069288-1|AAL39433.1|  477|Drosophila melanogaster GM14349p
           protein.
          Length = 477

 Score = 88.2 bits (209), Expect = 7e-18
 Identities = 50/114 (43%), Positives = 68/114 (59%)
 Frame = +1

Query: 169 ITKIVPQVSSLHFGKLSSAFLSVKSDRSYFTYTQSLSQPLDRKPEYSTAKEAFEKCLKSG 348
           + + V Q++SL   K ++   SV +  +YFTY + LS P+ R+P     +EA   C+KSG
Sbjct: 5   LARHVGQLNSLL--KTAATASSVSAHNNYFTYVRELSHPIAREPPIVKPEEAVA-CVKSG 61

Query: 349 LTVFAQCAAATPVPLLNAMTEVGKSGSLRDIKVVHMHTEKDAAYVTPGMQGHIQ 510
            TVFA  AAATPV LLNAM + GKS +L  + V HMHTE    Y  P  + H +
Sbjct: 62  DTVFAGGAAATPVALLNAMAKHGKSNNLECVTVCHMHTEGPGEYAKPEYKDHFR 115



 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 22/32 (68%), Positives = 25/32 (78%)
 Frame = +2

Query: 491 ECKDIFRSVSLFMAANVRKSVAEGRSDAIPIF 586
           E KD FRS S FM ANVRK+VA+GR D +PIF
Sbjct: 109 EYKDHFRSNSFFMGANVRKAVADGRGDNVPIF 140


>AE014297-4508|AAF56990.1|  477|Drosophila melanogaster CG7920-PA,
           isoform A protein.
          Length = 477

 Score = 88.2 bits (209), Expect = 7e-18
 Identities = 50/114 (43%), Positives = 68/114 (59%)
 Frame = +1

Query: 169 ITKIVPQVSSLHFGKLSSAFLSVKSDRSYFTYTQSLSQPLDRKPEYSTAKEAFEKCLKSG 348
           + + V Q++SL   K ++   SV +  +YFTY + LS P+ R+P     +EA   C+KSG
Sbjct: 5   LARHVGQLNSLL--KTAATASSVSAHNNYFTYVRELSHPIAREPPIVKPEEAVA-CVKSG 61

Query: 349 LTVFAQCAAATPVPLLNAMTEVGKSGSLRDIKVVHMHTEKDAAYVTPGMQGHIQ 510
            TVFA  AAATPV LLNAM + GKS +L  + V HMHTE    Y  P  + H +
Sbjct: 62  DTVFAGGAAATPVALLNAMAKHGKSNNLECVTVCHMHTEGPGEYAKPEYKDHFR 115



 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 22/32 (68%), Positives = 25/32 (78%)
 Frame = +2

Query: 491 ECKDIFRSVSLFMAANVRKSVAEGRSDAIPIF 586
           E KD FRS S FM ANVRK+VA+GR D +PIF
Sbjct: 109 EYKDHFRSNSFFMGANVRKAVADGRGDNVPIF 140


>AE014297-4509|AAN14206.1|  104|Drosophila melanogaster CG7920-PB,
           isoform B protein.
          Length = 104

 Score = 37.5 bits (83), Expect = 0.013
 Identities = 22/60 (36%), Positives = 35/60 (58%)
 Frame = +1

Query: 169 ITKIVPQVSSLHFGKLSSAFLSVKSDRSYFTYTQSLSQPLDRKPEYSTAKEAFEKCLKSG 348
           + + V Q++SL   K ++   SV +  +YFTY + LS P+ R+P     +EA   C+KSG
Sbjct: 5   LARHVGQLNSLL--KTAATASSVSAHNNYFTYVRELSHPIAREPPIVKPEEAV-ACVKSG 61


>AY089394-1|AAL90132.1|  250|Drosophila melanogaster AT21920p
           protein.
          Length = 250

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 8/81 (9%)
 Frame = +1

Query: 208 GKLSSAFLSVKSDRSYFTYTQSLSQPLDRKPEYSTAKEAFEKCLKSGLT--------VFA 363
           G ++    +V    SY T   S   P  R  E ST+     KC ++ +         +F 
Sbjct: 102 GSVAGDPAAVSEAASYKTEKPSSPCPCSRPLENSTSHR--RKCYRASIERWAPAEGRIFC 159

Query: 364 QCAAATPVPLLNAMTEVGKSG 426
            C A +  PL+ A TE+  +G
Sbjct: 160 PCCATSRRPLIKAATEISNNG 180


>AE013599-2228|AAF58034.2|  250|Drosophila melanogaster CG15708-PA
           protein.
          Length = 250

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 8/81 (9%)
 Frame = +1

Query: 208 GKLSSAFLSVKSDRSYFTYTQSLSQPLDRKPEYSTAKEAFEKCLKSGLT--------VFA 363
           G ++    +V    SY T   S   P  R  E ST+     KC ++ +         +F 
Sbjct: 102 GSVAGDPAAVSEAASYKTEKPSSPCPCSRPLENSTSHR--RKCYRASIERWAPAEGRIFC 159

Query: 364 QCAAATPVPLLNAMTEVGKSG 426
            C A +  PL+ A TE+  +G
Sbjct: 160 PCCATSRRPLIKAATEISNNG 180


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,661,021
Number of Sequences: 53049
Number of extensions: 556713
Number of successful extensions: 1258
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1256
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2358819486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)