Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0714
         (588 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28928-9|AAN63431.1|  471|Caenorhabditis elegans Hypothetical pr...    45   3e-05
AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical ...    29   1.9  
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p...    29   3.2  
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr...    29   3.2  
Z77664-2|CAB01217.1|  643|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z73970-5|CAA98248.1|  643|Caenorhabditis elegans Hypothetical pr...    28   5.7  
AF016666-6|AAB66086.1|  292|Caenorhabditis elegans Hypothetical ...    28   5.7  
Z79639-4|CAB01917.2|  254|Caenorhabditis elegans Hypothetical pr...    27   9.9  
AF101312-1|AAC69221.3|  813|Caenorhabditis elegans Hypothetical ...    27   9.9  
AF016421-11|AAM45373.2|  417|Caenorhabditis elegans Hypothetical...    27   9.9  

>U28928-9|AAN63431.1|  471|Caenorhabditis elegans Hypothetical
           protein C44B7.10 protein.
          Length = 471

 Score = 45.2 bits (102), Expect = 3e-05
 Identities = 24/73 (32%), Positives = 40/73 (54%)
 Frame = +1

Query: 292 RKPEYSTAKEAFEKCLKSGLTVFAQCAAATPVPLLNAMTEVGKSGSLRDIKVVHMHTEKD 471
           + P+  +  EA  + +KSG  VF    AATP PLL +++E   + +L  IK+ H+H E  
Sbjct: 36  KSPKVVSLAEA-TRDIKSGDNVFVHGIAATPTPLLQSLSEHAVANNLNKIKLHHLHLEGA 94

Query: 472 AAYVTPGMQGHIQ 510
             +   G++  I+
Sbjct: 95  TPWTAEGVRDRIR 107


>AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical
           protein Y87G2A.5 protein.
          Length = 1050

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
 Frame = -2

Query: 458 CIWTTLMSRNDPLFPTSVMALRRGTG---VAAAHWANTVSPDLRHFSNASFAVEYSGFLS 288
           CI   + +RN P+F  S + +  GTG   +  AH  N     +R        +   G +S
Sbjct: 345 CIHPFIPTRNLPIFADSFVEMEFGTGAVKITPAHDHNDYEVGIRQNLPFHNCITDDGLIS 404

Query: 287 RGC 279
           +GC
Sbjct: 405 QGC 407


>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
            protein 44, isoform f protein.
          Length = 6994

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 17/75 (22%), Positives = 32/75 (42%)
 Frame = +1

Query: 274  LSQPLDRKPEYSTAKEAFEKCLKSGLTVFAQCAAATPVPLLNAMTEVGKSGSLRDIKVVH 453
            + +P DR   ++ + E  E      L    + A A+PVP  ++   V ++ +   +   H
Sbjct: 4037 VQEPEDRPENFAESHEKTEATSDENLFESDKYAPASPVPSEDSSNRVIETTTTTTVTREH 4096

Query: 454  MHTEKDAAYVTPGMQ 498
               E D +YV    +
Sbjct: 4097 FEPEDDHSYVVESQE 4111


>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
            protein.
          Length = 6994

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 17/75 (22%), Positives = 32/75 (42%)
 Frame = +1

Query: 274  LSQPLDRKPEYSTAKEAFEKCLKSGLTVFAQCAAATPVPLLNAMTEVGKSGSLRDIKVVH 453
            + +P DR   ++ + E  E      L    + A A+PVP  ++   V ++ +   +   H
Sbjct: 4037 VQEPEDRPENFAESHEKTEATSDENLFESDKYAPASPVPSEDSSNRVIETTTTTTVTREH 4096

Query: 454  MHTEKDAAYVTPGMQ 498
               E D +YV    +
Sbjct: 4097 FEPEDDHSYVVESQE 4111


>Z77664-2|CAB01217.1|  643|Caenorhabditis elegans Hypothetical
           protein C29A12.6 protein.
          Length = 643

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 14/50 (28%), Positives = 29/50 (58%)
 Frame = +1

Query: 136 VKLNLNNRMSVITKIVPQVSSLHFGKLSSAFLSVKSDRSYFTYTQSLSQP 285
           + ++   RM+  T I P+ +  +  + +S + + K+ RSY T T++ S+P
Sbjct: 329 IPMSTTRRMTTTT-IRPKTTKKYLSRSTSKYDAKKTTRSYQTTTRTTSKP 377


>Z73970-5|CAA98248.1|  643|Caenorhabditis elegans Hypothetical
           protein C29A12.6 protein.
          Length = 643

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 14/50 (28%), Positives = 29/50 (58%)
 Frame = +1

Query: 136 VKLNLNNRMSVITKIVPQVSSLHFGKLSSAFLSVKSDRSYFTYTQSLSQP 285
           + ++   RM+  T I P+ +  +  + +S + + K+ RSY T T++ S+P
Sbjct: 329 IPMSTTRRMTTTT-IRPKTTKKYLSRSTSKYDAKKTTRSYQTTTRTTSKP 377


>AF016666-6|AAB66086.1|  292|Caenorhabditis elegans Hypothetical
           protein B0281.8 protein.
          Length = 292

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 17/61 (27%), Positives = 28/61 (45%)
 Frame = +1

Query: 283 PLDRKPEYSTAKEAFEKCLKSGLTVFAQCAAATPVPLLNAMTEVGKSGSLRDIKVVHMHT 462
           P + K  ++  +   +K LK+G  V   C   T VP+ N  +       ++ IK+V   T
Sbjct: 23  PRNLKCSHTLCEGCIKKLLKNGRVVCPFCREPTEVPVYNIKSLHKNFSLIQMIKIVTKTT 82

Query: 463 E 465
           E
Sbjct: 83  E 83


>Z79639-4|CAB01917.2|  254|Caenorhabditis elegans Hypothetical
           protein F54E4.3 protein.
          Length = 254

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 17/82 (20%), Positives = 38/82 (46%)
 Frame = +1

Query: 169 ITKIVPQVSSLHFGKLSSAFLSVKSDRSYFTYTQSLSQPLDRKPEYSTAKEAFEKCLKSG 348
           +T    +VS  ++  L   F+++  + ++  Y    +     + +    KE  +KC+K  
Sbjct: 19  LTSAQDEVSQCNYVGLVKCFINILDEWAWTLYELKENVVTITQDQCEHLKE-LDKCIKDD 77

Query: 349 LTVFAQCAAATPVPLLNAMTEV 414
           L V  QC+    V + N ++++
Sbjct: 78  LPVAHQCSHNEVVQVSNTVSDL 99


>AF101312-1|AAC69221.3|  813|Caenorhabditis elegans Hypothetical
           protein F56E10.2 protein.
          Length = 813

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 50  YIYWLLGVGARVLSLTTNKIVITTSLCFV 136
           +I+W++G G    S     I I + LCF+
Sbjct: 11  FIFWIIGYGTDYCSYRIVAIEILSGLCFI 39


>AF016421-11|AAM45373.2|  417|Caenorhabditis elegans Hypothetical
           protein F44E7.8 protein.
          Length = 417

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
 Frame = +1

Query: 199 LHFGKLS----SAFL--SVKSDRSYFTYTQSLSQPLDRKPEYSTAKEAFEKCLKSGLT 354
           +HFG LS    +AF   SV  D+ Y     S    +D+   Y      ++KCL+ G+T
Sbjct: 36  VHFGVLSCRACAAFFRRSVVMDKKYSCRKASQGCRIDKSERYLCRLCRYKKCLQLGMT 93


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,499,599
Number of Sequences: 27780
Number of extensions: 275867
Number of successful extensions: 836
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)