Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0711
         (472 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7TTV9 Cluster: Putative uncharacterized protein; n=1; ...    32   7.3  
UniRef50_Q4YKS6 Cluster: Putative uncharacterized protein; n=1; ...    31   9.7  

>UniRef50_A7TTV9 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 236

 Score = 31.9 bits (69), Expect = 7.3
 Identities = 22/57 (38%), Positives = 29/57 (50%)
 Frame = -1

Query: 412 KKKDSAQCNAT*ISRRAGSTTRCMPPFPLRVHLSISFLASRI*SLLYQF*NASFTLC 242
           K+K   QCN T + + A  T   M    L + LS+SFL   I   L+QF N S + C
Sbjct: 137 KRKCKCQCNFTPVLQLASMTLEKMMFSFLSLSLSLSFLTLSI--SLFQFINTSISNC 191


>UniRef50_Q4YKS6 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 139

 Score = 31.5 bits (68), Expect = 9.7
 Identities = 17/54 (31%), Positives = 31/54 (57%)
 Frame = -1

Query: 169 FFCVIMFIFYKIRLFTFVMVLWIFFCHMNNII*YYRILVSLINTK*FLKYIVLI 8
           FF + +FIF+ + +  F +++ IFF  +  II ++ ILV+      F  Y+ +I
Sbjct: 42  FFIIFIFIFFVLIIIFFFVLIIIFFFVLIIIIFFFNILVTFF----FFFYVCII 91


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 370,506,643
Number of Sequences: 1657284
Number of extensions: 5888701
Number of successful extensions: 11120
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11109
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26030843530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)