Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0708
         (528 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical pr...    29   1.6  
Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical pr...    28   4.8  
AL032623-18|CAN99758.1|  330|Caenorhabditis elegans Hypothetical...    28   4.8  
U80954-5|AAB38096.1|  822|Caenorhabditis elegans Hypothetical pr...    27   6.3  
U41996-1|AAA83471.2|  306|Caenorhabditis elegans Serpentine rece...    27   6.3  
AC024211-5|AAF36063.2| 1119|Caenorhabditis elegans Hypothetical ...    27   6.3  
Z81016-3|CAB02664.1|  326|Caenorhabditis elegans Hypothetical pr...    27   8.3  
Z37092-4|CAA85455.1|  890|Caenorhabditis elegans Hypothetical pr...    27   8.3  

>Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical protein
            ZK593.4 protein.
          Length = 1477

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
 Frame = +3

Query: 210  LVPYIKCYWTKAAALPMGRNLKLISKTECRQRVRSVQINRRCQPERSLNTLSS-TKLITG 386
            L  ++ C       LP  R L      E  Q+  S  +  + +P RS  ++S     IT 
Sbjct: 1317 LFDWLSCEILNPNGLPKARELISEFYMEYLQKQSSAALELKNRPVRSKPSVSLFDPKITA 1376

Query: 387  SR*RPNMIPKMNSKKSTRDSS 449
             R RP++  K  SKKS +  S
Sbjct: 1377 KRKRPSVSHKETSKKSRKRQS 1397


>Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical protein
            F54E4.1 protein.
          Length = 2948

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 269  LKAHIKDGMQTACAKCTDKQ 328
            L   +KD +QT C+KC D Q
Sbjct: 1727 LSGSLKDAVQTLCSKCNDVQ 1746


>AL032623-18|CAN99758.1|  330|Caenorhabditis elegans Hypothetical
           protein Y43F8B.15 protein.
          Length = 330

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 13/55 (23%)
 Frame = +2

Query: 314 CTDKQKVSARKIVK---HI-----KQHEADYWEQM----KAKYDPKDE-FKEIYE 439
           CTD QKV   +++    H      KQH  DYW+++       + P DE FK +Y+
Sbjct: 95  CTDSQKVLCNEVIITTFHALFDLKKQHPHDYWKRIILYHTNDFTPTDEQFKRLYK 149


>U80954-5|AAB38096.1|  822|Caenorhabditis elegans Hypothetical
           protein T07F8.1 protein.
          Length = 822

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +2

Query: 242 GRCTPDGKELKAHIKDGMQTACAKCTDKQKVSARKIVKHIKQ 367
           GR T D ++   H      TAC KC +K  +S  ++++H  +
Sbjct: 578 GRYTEDQRQAAKH----HPTACLKCQEKHILSNEEMIEHANE 615


>U41996-1|AAA83471.2|  306|Caenorhabditis elegans Serpentine
           receptor, class sx protein22 protein.
          Length = 306

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 369 CCLMCLTIFLADTFCLSVHFAHAVCIPS 286
           CC++ L + LA  F LS      VC P+
Sbjct: 129 CCILSLVVSLAKLFYLSEDIVLTVCYPT 156


>AC024211-5|AAF36063.2| 1119|Caenorhabditis elegans Hypothetical
           protein Y76B12C.2 protein.
          Length = 1119

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = +2

Query: 251 TPDGKELKAHIKDG--MQTACAKCTDKQKVSARKIVKHIKQHEADYWEQMKAKY 406
           TP  K L+   K G   Q    K    +K +A+K+V   + +  +YW+  + ++
Sbjct: 684 TPGEKSLEIQEKSGEKSQKPAKKGQKSEKKAAKKVVVEERNYWVEYWQPREKRW 737


>Z81016-3|CAB02664.1|  326|Caenorhabditis elegans Hypothetical
           protein F21G4.5 protein.
          Length = 326

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
 Frame = +2

Query: 305 CAKCTDKQKVSARKIVKH-----IKQHEADYWEQMKAKYDPKDEFKEI 433
           C KC  KQ+V+ R  V+H     +K H   Y      K +  D+ KE+
Sbjct: 71  CTKCR-KQEVNVRDFVEHYLEHEVKVHRVSYEHLGVVKPEINDKIKEV 117


>Z37092-4|CAA85455.1|  890|Caenorhabditis elegans Hypothetical
           protein F44F4.4 protein.
          Length = 890

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = +3

Query: 18  HEGHTESESSVWGDIAFVLIKTIADMKCLTIA-ALLFVAGLSIAEKYTDKYDNID 179
           H+  T   + +W  +++ +  T+A    +TI   L+  A +SI    T K   ID
Sbjct: 3   HKNETSRVTRIWNSLSYKIGSTVARYPVITIIFCLVLSAVMSIKLALTPKVSAID 57


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,171,116
Number of Sequences: 27780
Number of extensions: 242627
Number of successful extensions: 694
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)