Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0707
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    21   5.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   5.8  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    21   5.8  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    21   5.8  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   7.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   7.7  

>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/23 (30%), Positives = 11/23 (47%)
 Frame = -3

Query: 456 YKALTSRSQSHTKRLNFMKCNFC 388
           Y+  T   Q    R+N  +C +C
Sbjct: 52  YRPCTKNQQCSILRINRNRCQYC 74


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/23 (30%), Positives = 11/23 (47%)
 Frame = -3

Query: 456 YKALTSRSQSHTKRLNFMKCNFC 388
           Y+  T   Q    R+N  +C +C
Sbjct: 101 YRPCTKNQQCSILRINRNRCQYC 123


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 70  SESRVRQRLGFNELLGRR 17
           SES  R R+GF+ + G+R
Sbjct: 249 SESFKRARMGFHGMRGKR 266


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 70  SESRVRQRLGFNELLGRR 17
           SES  R R+GF+ + G+R
Sbjct: 249 SESFKRARMGFHGMRGKR 266


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = +2

Query: 281 HIGLGCSDECLPLHPYTAADLHETCNTQTKKFETI*QK 394
           H  +      +PL P   +D+ E  N     F+T+ Q+
Sbjct: 107 HQAINTCQPSIPLEPDFTSDVTERDNHLVNAFKTLTQE 144


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 227  LVPVLYAILFVFVSV*CKCCL 165
            +VPV+ AIL + V+V   C L
Sbjct: 1588 VVPVVAAILVIIVAVIVICVL 1608


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,633
Number of Sequences: 438
Number of extensions: 2713
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)