Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0706
(609 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6771| Best HMM Match : Aldedh (HMM E-Value=0) 222 2e-58
SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 3e-23
SB_12802| Best HMM Match : Aldedh (HMM E-Value=0) 93 2e-19
SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 3e-18
SB_58786| Best HMM Match : Aldedh (HMM E-Value=0) 83 2e-16
SB_57708| Best HMM Match : Aldedh (HMM E-Value=0) 69 4e-12
SB_26122| Best HMM Match : Aldedh (HMM E-Value=0) 62 3e-10
SB_30067| Best HMM Match : Aldedh (HMM E-Value=1.4) 60 1e-09
SB_20180| Best HMM Match : Aldedh (HMM E-Value=5.3e-08) 57 1e-08
SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 5e-08
SB_52934| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_19772| Best HMM Match : Aldedh (HMM E-Value=5.9e-12) 46 2e-05
SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0) 40 0.001
SB_22312| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_14803| Best HMM Match : Aldedh (HMM E-Value=4.9e-08) 38 0.005
SB_32640| Best HMM Match : Aldedh (HMM E-Value=4.9e-08) 38 0.005
SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16) 32 0.42
SB_16513| Best HMM Match : Aldedh (HMM E-Value=9.9e-05) 30 1.7
SB_58432| Best HMM Match : DUF735 (HMM E-Value=4.6) 29 2.9
SB_41992| Best HMM Match : efhand (HMM E-Value=2.4e-10) 28 5.1
SB_54083| Best HMM Match : GIY-YIG (HMM E-Value=0.059) 28 5.1
>SB_6771| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 523
Score = 222 bits (543), Expect = 2e-58
Identities = 108/202 (53%), Positives = 139/202 (68%), Gaps = 1/202 (0%)
Frame = +2
Query: 2 AGLPDGVVNFVPSDGPTFGRVITSSPYLAGINFTGSVPTFNWLWNEVGKNLNTYRNYPRL 181
AGLPDGV+NFVPS G TFG +T+SP+LA +NFTGSV T YP+L
Sbjct: 229 AGLPDGVINFVPSSGSTFGNAMTTSPHLAAVNFTGSVET-----------------YPKL 271
Query: 182 IGECGGKNYHFVHPSADIQTVVSGTIRSAFEFCGQKCSACSRIYIPQSLYEPIKTGLLAE 361
+GECGGKNYHFVH SAD+ VV+ TIR+AF + GQKCSACSR+Y+P+S + IK LLAE
Sbjct: 272 VGECGGKNYHFVHMSADLDVVVNSTIRAAFGYQGQKCSACSRLYVPKSRWPEIKEALLAE 331
Query: 362 RAKLKIGDPADF-SVFTAAVIDDKAFARITGYIQRAKKNPKNKILGGGEFDNSKGYFVQP 538
K+G P D + F AVID+ +F I Y+ K + + +L GG D S GYFV+P
Sbjct: 332 LKTAKMGSPVDIDNTFMTAVIDEASFDNIKTYLDFCKSSDEITVLAGGNCDKSVGYFVEP 391
Query: 539 TIIETTDPHDKLMTEEIFGPVL 604
TI+ET++P++K+M EEIFGPV+
Sbjct: 392 TIVETSNPYNKMMKEEIFGPVV 413
>SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 105 bits (252), Expect = 3e-23
Identities = 70/201 (34%), Positives = 99/201 (49%), Gaps = 1/201 (0%)
Frame = +2
Query: 2 AGLPDGVVNFVPSDGPTFGRVITSSPYLAGINFTGSVPTFNWLWNEVGKNLNTYRNYPRL 181
AG P GVVN +P GPT G IT+ + ++FTGS + K+ N RL
Sbjct: 520 AGFPAGVVNVIPGYGPTAGAAITTHLDIDKVSFTGSTEVGRLIQEASAKS-----NLKRL 574
Query: 182 IGECGGKNYHFVHPSADIQTVVSGTIRSAFEFCGQKCSACSRIYIPQSLY-EPIKTGLLA 358
E GGK+ + V +D+ V + F GQ CSA SR ++ ++Y E +K +
Sbjct: 575 TLELGGKSPNIVFADSDMDYAVEMAHEALFFNQGQCCSAGSRTFVQDTIYDEFVKKSVKR 634
Query: 359 ERAKLKIGDPADFSVFTAAVIDDKAFARITGYIQRAKKNPKNKILGGGEFDNSKGYFVQP 538
+A+ +GDP D SV ID + F +I I+ KK GG N KG+F+QP
Sbjct: 635 AKAR-TVGDPFD-SVEQGPQIDQEQFDKIMDLIESGKKEGAKMQCGGARHGN-KGFFIQP 691
Query: 539 TIIETTDPHDKLMTEEIFGPV 601
T+ ++ EEIFGPV
Sbjct: 692 TVFSDVTDDMRIAKEEIFGPV 712
>SB_12802| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 880
Score = 93.1 bits (221), Expect = 2e-19
Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 5/207 (2%)
Frame = +2
Query: 2 AGLPDGVVNFVPSDGPTFGRVITSSPYLAGINFTGSVPTFNWLWNEVGKNLNTYRNYPRL 181
AG+P GVVN + G T G +++ P +A ++FTGSVPT + + +
Sbjct: 463 AGVPPGVVNIIQGGGET-GEMLSKDPNVAKVSFTGSVPTGQKIMASCADGIK------HV 515
Query: 182 IGECGGKNYHFVHPSADIQTVVSGTIRSAFEFCGQKCSACSRIYIPQSLYEPIKTGLLAE 361
E GGK+ + AD+ VSG + + F GQ CS +R+++ S+ + ++
Sbjct: 516 TLELGGKSPLIIFKDADMANAVSGALMANFLSQGQVCSNGTRVFVEDSIKDEFLEKVVER 575
Query: 362 RAKLKIGDPADFSVFTAAVIDDKAFARITGYIQRAKKNPKNKILGGGEFDN-----SKGY 526
+++GDP A+I ++ Y+Q K+ K+L GGE + + GY
Sbjct: 576 TKNIRVGDPMAPDTQMGAMISSAHLNKVLDYVQ-IGKDEGAKVLCGGERLHLPEPLTSGY 634
Query: 527 FVQPTIIETTDPHDKLMTEEIFGPVLT 607
++ P ++ ++ EEIFGPV+T
Sbjct: 635 YMSPCVMAECTDDMTVVKEEIFGPVMT 661
>SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 89.0 bits (211), Expect = 3e-18
Identities = 62/203 (30%), Positives = 96/203 (47%), Gaps = 2/203 (0%)
Frame = +2
Query: 2 AGLPDGVVNFVPSDGPTFGRVITSSPYLAGINFTGSVPTFNWLWNEVGKNLN--TYRNYP 175
AGLP GV N V +G FG + P + + FTGS EVGK L T +
Sbjct: 820 AGLPPGVFNVVTGNG-AFGSQLAGHPDVDKVAFTGST--------EVGKLLRQLTAGSGK 870
Query: 176 RLIGECGGKNYHFVHPSADIQTVVSGTIRSAFEFCGQKCSACSRIYIPQSLYEPIKTGLL 355
+L E GGK+ V SAD+ + V G + + + GQ CSA SR+ + ++ + + +
Sbjct: 871 KLSLELGGKSPFVVFDSADLDSAVEGVVDAIWFNQGQVCSAGSRLLVQETCAQRMIKKIK 930
Query: 356 AERAKLKIGDPADFSVFTAAVIDDKAFARITGYIQRAKKNPKNKILGGGEFDNSKGYFVQ 535
L++GDP D S+ A++D + ++ A+ + G +
Sbjct: 931 ERMTHLRLGDPLDKSIDMGAIVDPSQQKSVAKMVEEARAEGAEVYQKCASLPS--GCYYP 988
Query: 536 PTIIETTDPHDKLMTEEIFGPVL 604
PT+I P K++ EE+FGPVL
Sbjct: 989 PTLITNVQPVSKIVMEEVFGPVL 1011
>SB_58786| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 421
Score = 83.0 bits (196), Expect = 2e-16
Identities = 56/202 (27%), Positives = 89/202 (44%), Gaps = 1/202 (0%)
Frame = +2
Query: 2 AGLPDGVVNFVPSDGPTFGRVITSSPYLAGINFTGSVPTFNWLWNEVGKNLNTYRNYPRL 181
A +PDGV N + + S + ++FTGS L+ + K L +L
Sbjct: 134 AEIPDGVFNIIVGSSSLISNKLCDSDIIRKLSFTGSTAVGQDLYQKSAKTLK------KL 187
Query: 182 IGECGGKNYHFVHPSADIQTVVSGTIRSAFEFCGQKCSACSRIYIPQSLYEPIKTGLLAE 361
E GG + A++ VSG I S F GQ C +R+++ +Y+ L+
Sbjct: 188 SLELGGNAPFIIFDDANLDKAVSGLINSKFRNAGQTCVCANRVFVDSKIYDQFIEKLIPV 247
Query: 362 RAKLKIGDPADFSVFTAAVIDDKAFARITGYIQRAKKNPKNKILGGGEFDNS-KGYFVQP 538
LK+G+ D V +I+ A G I A N K ++L E D S G F+ P
Sbjct: 248 VQDLKVGNGLDSGVNIGPLINQAAIDHAKGLIDDAI-NQKAQLLYHLEEDRSLNGNFLNP 306
Query: 539 TIIETTDPHDKLMTEEIFGPVL 604
++ + + ++ EEIF PV+
Sbjct: 307 VVLGNCNSNMRIFNEEIFAPVI 328
>SB_57708| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 528
Score = 68.5 bits (160), Expect = 4e-12
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 4/204 (1%)
Frame = +2
Query: 2 AGLPDGVVNFVPSDGPTFGRV---ITSSPYLAGINFTGSVPTFNWLWNEVGKNLNTYRNY 172
AG P GV+N +P V + S ++ ++FTGS T L + K ++T +
Sbjct: 192 AGFPAGVINTIPCSRDRVNEVTDTVLKSDLVSKMSFTGSTATGKIL---MAKCVDTVK-- 246
Query: 173 PRLIGECGGKNYHFVHPSADIQTVVSGTIRSAFEFCGQKCSACSRIYIPQSLYEPI-KTG 349
++ E GG V SA+I++ V G + + Q C +RI + +Y+ K
Sbjct: 247 -KMSLELGGNAPFIVFNSANIESAVKGALICKYRNTAQTCICANRIIVQDGIYDEFAKRF 305
Query: 350 LLAERAKLKIGDPADFSVFTAAVIDDKAFARITGYIQRAKKNPKNKILGGGEFDNSKGYF 529
A +LKIG+ D +I+ A ++ ++ A + GG + +F
Sbjct: 306 AEAVDQQLKIGNGMDAGTTQGPLINKMAVEKVERHVADALSKGAKLMRGGHRHPQGENFF 365
Query: 530 VQPTIIETTDPHDKLMTEEIFGPV 601
+PT++ P + EE FGP+
Sbjct: 366 -EPTVLTDVSPDMLVCKEETFGPL 388
>SB_26122| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 462
Score = 62.5 bits (145), Expect = 3e-10
Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 6/188 (3%)
Frame = +2
Query: 2 AGLPDGVVNFVPSDGPTFGRVITSSPYLAGINFTGSVPTFNWLWNEVGKNLNTYRNYPRL 181
+G+P GVVN V G GR++ +A + GS + E G + R+
Sbjct: 204 SGIPKGVVNIVYGRGEVIGRILARHHDVAAVALVGSERAAFSVTMESGPRVK------RV 257
Query: 182 IGECGGKNYHFVHPSADIQTVVSGTIRSAFEFC--GQKCSACSRIYIPQSLYEPIKTGLL 355
E G + V+ D+ ++ I+++F C GQ A +RI++ ++ E L+
Sbjct: 258 SYELGNCHAMVVYDDVDLDELIPTVIKASF-LCNAGQHPHAVNRIFVHGAVLEIFTEKLV 316
Query: 356 AERAKLKIGDPADFSVFTAAVIDDKAFARITGYIQRAKKNPKNKILGGG--EFDN--SKG 523
K+KIG+P + S +I + + IQ A + I GGG + D+ +G
Sbjct: 317 KAIRKIKIGNPQESSTQIGPLISKEQKQTVLALIQGAINDGAKVIHGGGSPKLDSKLDRG 376
Query: 524 YFVQPTII 547
+FV+PT++
Sbjct: 377 FFVEPTVL 384
>SB_30067| Best HMM Match : Aldedh (HMM E-Value=1.4)
Length = 119
Score = 60.1 bits (139), Expect = 1e-09
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Frame = +2
Query: 263 SAFEFCGQKCSACSRIYIPQSLYEPIKTGLLAERAKLKIGDPADFSVFTAAVIDDKAFAR 442
S+F G+ C SRI++ +S+Y+ + E KL +G P + S F A+I +
Sbjct: 2 SSFANQGEICLCTSRIFVQRSIYDNFLDMFVQETRKLIVGPPTENSSFMGALISKDHLEK 61
Query: 443 ITGYIQRAKKNPKNKILGGGE-------FDNSKGYFVQPTIIETTDPHDKLMTEEIF 592
+ GYI+ AK++ + G + + GYF++PT+I + M EEIF
Sbjct: 62 VKGYIRIAKEDGGTVLCGESKDPPPDLPKEYKNGYFMRPTVITDVKDSSRCMQEEIF 118
>SB_20180| Best HMM Match : Aldedh (HMM E-Value=5.3e-08)
Length = 266
Score = 56.8 bits (131), Expect = 1e-08
Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 1/148 (0%)
Frame = +2
Query: 164 RNYPRLIGECGGKNYHFVHPSADIQTVVSGTIRSAFEFCGQKCSACSRIYIPQSLYEPIK 343
+N RL+ KN V P DI V + A F GQ+C+A +++ + + E
Sbjct: 6 KNRLRLVLGLEAKNPGIVLPDCDIDLAVRECVNGALAFNGQRCTALKILFVHEDIVEEFN 65
Query: 344 TGLLAERAKLKIGDPADFSVFTAAVIDDKAFARITGYIQRA-KKNPKNKILGGGEFDNSK 520
+ + LK G+P + V + + A I I+ A +K K GGE S
Sbjct: 66 QKFIEQVENLKYGNPWETGVNITPLPEPHKPAYIQELIKDAQEKGAKVINKNGGERQES- 124
Query: 521 GYFVQPTIIETTDPHDKLMTEEIFGPVL 604
FV P I+ + K+ EE FGPV+
Sbjct: 125 --FVYPAILYPVNSTMKIYEEEQFGPVV 150
>SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 54.8 bits (126), Expect = 5e-08
Identities = 38/147 (25%), Positives = 65/147 (44%)
Frame = +2
Query: 164 RNYPRLIGECGGKNYHFVHPSADIQTVVSGTIRSAFEFCGQKCSACSRIYIPQSLYEPIK 343
+N R+ E GGK+ ++ D++TV F GQ C A + +
Sbjct: 170 KNLTRVTLELGGKSPCYIDEDCDMKTVARRICWGKFTNSGQTCVAPDYVLCNPGIQSKFI 229
Query: 344 TGLLAERAKLKIGDPADFSVFTAAVIDDKAFARITGYIQRAKKNPKNKILGGGEFDNSKG 523
+ + DP D + + +++DK + R+ + R I+ GG+ D+ +
Sbjct: 230 KSMKETLYEFYGEDPHDSADY-GRIVNDKHYNRLKALLTRGT------IVLGGDTDDKER 282
Query: 524 YFVQPTIIETTDPHDKLMTEEIFGPVL 604
Y + PTI+ P D +M EIFGP+L
Sbjct: 283 Y-ISPTILTGVKPSDPVMENEIFGPIL 308
>SB_52934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/100 (26%), Positives = 46/100 (46%)
Frame = +2
Query: 305 RIYIPQSLYEPIKTGLLAERAKLKIGDPADFSVFTAAVIDDKAFARITGYIQRAKKNPKN 484
R+++ +S+++ L+ E KLKIGDP D + + Y++R +
Sbjct: 69 RLFVEESIHDEFVNRLVDELKKLKIGDPLDTATDHGPQNHKAHLDSLVEYVKRGVEEGAK 128
Query: 485 KILGGGEFDNSKGYFVQPTIIETTDPHDKLMTEEIFGPVL 604
+ GG D G+F +P + + + EE FGPV+
Sbjct: 129 LVYGGRHLDR-PGFFFEPAVFTNVEDDMFIAKEESFGPVV 167
>SB_19772| Best HMM Match : Aldedh (HMM E-Value=5.9e-12)
Length = 211
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/62 (33%), Positives = 34/62 (54%)
Frame = +2
Query: 419 IDDKAFARITGYIQRAKKNPKNKILGGGEFDNSKGYFVQPTIIETTDPHDKLMTEEIFGP 598
+D + +I I+ +K K+ GG+ KGYF+QPT+ + ++ EEIFGP
Sbjct: 77 VDGEQMTKILNLIESGRKEGA-KLEVGGDRAGDKGYFIQPTVFSDVQDNMRIAQEEIFGP 135
Query: 599 VL 604
V+
Sbjct: 136 VM 137
>SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0)
Length = 1485
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/76 (28%), Positives = 37/76 (48%)
Frame = +2
Query: 167 NYPRLIGECGGKNYHFVHPSADIQTVVSGTIRSAFEFCGQKCSACSRIYIPQSLYEPIKT 346
N R+ E GGK+ + V AD+ V + F GQ C A +RI++ +S+++
Sbjct: 1402 NLKRVTLELGGKSPNIVFADADLDWAVEMSCLGLFINQGQCCCAGTRIFVEESIHDEFVR 1461
Query: 347 GLLAERAKLKIGDPAD 394
+A +GDP +
Sbjct: 1462 QCVARAKARVVGDPLE 1477
>SB_22312| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/36 (55%), Positives = 22/36 (61%)
Frame = +2
Query: 2 AGLPDGVVNFVPSDGPTFGRVITSSPYLAGINFTGS 109
AG P+GVVN VP GPT G I S + I FTGS
Sbjct: 1 AGFPEGVVNIVPGFGPTAGGAIASHMDVDKIAFTGS 36
>SB_14803| Best HMM Match : Aldedh (HMM E-Value=4.9e-08)
Length = 195
Score = 38.3 bits (85), Expect = 0.005
Identities = 34/120 (28%), Positives = 48/120 (40%), Gaps = 4/120 (3%)
Frame = +2
Query: 257 IRSAFEFCGQKCSACSRIYIPQSLYEPIKTGLLAERAK-LKIGDPADFSVFTAAVIDDKA 433
+ +AF GQ+C A S E I + E+AK LK+ +I +A
Sbjct: 24 VGAAFGAAGQRCMALSTAIFVGETKEWIPE--IVEKAKQLKVSAGDQPGADLGPMISPQA 81
Query: 434 FARITGYIQRAKKNPKNKILGGGEF---DNSKGYFVQPTIIETTDPHDKLMTEEIFGPVL 604
R +Q + + L G + G FV PT++ P EEIFGPVL
Sbjct: 82 KKRACDLVQSGVEQGASLDLDGRDIVVKGYENGNFVGPTVLSNVTPEMTCYKEEIFGPVL 141
>SB_32640| Best HMM Match : Aldedh (HMM E-Value=4.9e-08)
Length = 195
Score = 38.3 bits (85), Expect = 0.005
Identities = 34/120 (28%), Positives = 48/120 (40%), Gaps = 4/120 (3%)
Frame = +2
Query: 257 IRSAFEFCGQKCSACSRIYIPQSLYEPIKTGLLAERAK-LKIGDPADFSVFTAAVIDDKA 433
+ +AF GQ+C A S E I + E+AK LK+ +I +A
Sbjct: 24 VGAAFGAAGQRCMALSTAIFVGETKEWIPE--IVEKAKQLKVSAGDQPGADLGPMISPQA 81
Query: 434 FARITGYIQRAKKNPKNKILGGGEF---DNSKGYFVQPTIIETTDPHDKLMTEEIFGPVL 604
R +Q + + L G + G FV PT++ P EEIFGPVL
Sbjct: 82 KKRACDLVQSGVEQGASLDLDGRDIVVKGYENGNFVGPTVLSNVTPEMTCYKEEIFGPVL 141
>SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1333
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 2 AGLPDGVVNFVPSDGPTFGRVITSSPYLAGINFTGSVP 115
AG P GV+N +P G G I P + + FTGS P
Sbjct: 772 AGFPKGVINILPGSGSVVGNRICEHPDVRKLGFTGSTP 809
>SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16)
Length = 266
Score = 31.9 bits (69), Expect = 0.42
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 2 AGLPDGVVNFVPSDGPTFGRVITSSPYLAGINFTGS 109
AG P GV+N V G G I P + I+FTGS
Sbjct: 199 AGFPPGVINIVFGTGSRTGSAIVQHPDVHLISFTGS 234
>SB_16513| Best HMM Match : Aldedh (HMM E-Value=9.9e-05)
Length = 301
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 9/96 (9%)
Frame = +2
Query: 341 KTGLLAERAKLKIGDPADFSVFTAAVIDDKAFARI------TGYIQRAKKNPKNK---IL 493
K + ++ L++G A F VF +A ID + T ++R + +K ++
Sbjct: 158 KCVVTVKKMSLELGGNAPFVVFNSADIDKAVNGAVVYKFRNTAQVERHVADALSKSARLM 217
Query: 494 GGGEFDNSKGYFVQPTIIETTDPHDKLMTEEIFGPV 601
GG F +PT++ + + EE FGP+
Sbjct: 218 RGGHRHPQGENFFEPTVLTDVNQDTLVCMEETFGPL 253
>SB_58432| Best HMM Match : DUF735 (HMM E-Value=4.6)
Length = 328
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = +2
Query: 284 QKCSACSRIYIPQSLYEPIKTGLLAERAKLKIGDPADFSVFTAAVIDDKAFARITGYIQR 463
QK ++ +++ +P + P K G ++A+L +GD + T + +K TG+ R
Sbjct: 185 QKINSSTKVPVPNKIEVP-KKGRSLKKARLCLGDRGQPTDTTQNIFAEKQCGHFTGHFDR 243
Query: 464 AKK 472
K
Sbjct: 244 IIK 246
>SB_41992| Best HMM Match : efhand (HMM E-Value=2.4e-10)
Length = 1303
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -1
Query: 144 PTSFHSQLKVGTEPVKLIPARYGDDVMTRPNVGPSDGTKFT 22
P+S H Q +P + PA+ D +GP+ T+FT
Sbjct: 670 PSSNHGQTDPANKPCERGPAKPDDTPSGTGEIGPAGSTRFT 710
>SB_54083| Best HMM Match : GIY-YIG (HMM E-Value=0.059)
Length = 333
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 278 CGQKCSACSRIYIPQSLYEPIKTG 349
CGQKC CSR ++ + TG
Sbjct: 183 CGQKCDLCSRYFVQSQHFISAATG 206
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,009,232
Number of Sequences: 59808
Number of extensions: 461358
Number of successful extensions: 1188
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1171
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1487884875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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