Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0705
         (526 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    23   2.2  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    23   2.2  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    23   2.2  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   8.8  

>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = -3

Query: 362 PTIILSIYKWLEQIRCLYRTAFNFHFRRKKAA-ILNTKTKIVSARTSHPESVRRH 201
           P++   + +WLE+   L    FNF  + +KA   L T+ K + A     E+++R+
Sbjct: 20  PSLTDLVQRWLERTPGLELEGFNFWGKYQKAVEKLLTEQKEL-AEKEEAETLKRY 73


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = -3

Query: 362 PTIILSIYKWLEQIRCLYRTAFNFHFRRKKAA-ILNTKTKIVSARTSHPESVRRH 201
           P++   + +WLE+   L    FNF  + +KA   L T+ K + A     E+++R+
Sbjct: 180 PSLTDLVQRWLERTPGLELEGFNFWGKYQKAVEKLLTEQKEL-AEKEEAETLKRY 233


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = -3

Query: 362 PTIILSIYKWLEQIRCLYRTAFNFHFRRKKAA-ILNTKTKIVSARTSHPESVRRH 201
           P++   + +WLE+   L    FNF  + +KA   L T+ K + A     E+++R+
Sbjct: 180 PSLTDLVQRWLERTPGLELEGFNFWGKYQKAVEKLLTEQKEL-AEKEEAETLKRY 233


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -3

Query: 209 RRHSYFREELSWVFIKAYRC 150
           R+H YF  E   +  K Y C
Sbjct: 109 RKHGYFAHEEPHICDKFYYC 128


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,266
Number of Sequences: 336
Number of extensions: 2111
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12678017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)