Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0705
         (526 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_2159| Best HMM Match : Rick_17kDa_Anti (HMM E-Value=3.7)            30   1.0  
SB_47535| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.8  
SB_44813| Best HMM Match : Crystallin (HMM E-Value=0.26)               29   1.8  
SB_14306| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.1  
SB_26155| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.4  
SB_130| Best HMM Match : rve (HMM E-Value=0.0043)                      27   7.2  
SB_4357| Best HMM Match : Vicilin_N (HMM E-Value=0.11)                 27   9.5  
SB_36900| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.5  
SB_27599| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.5  

>SB_2159| Best HMM Match : Rick_17kDa_Anti (HMM E-Value=3.7)
          Length = 443

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 18/65 (27%), Positives = 25/65 (38%)
 Frame = +3

Query: 12  GTRSDSTRPPAGTCTGGHTSRTWRYGLEGFVGAIYGLERPKLDCNEAPICLYKYPRQFLS 191
           G    S     G CTGG    +   G+ G  G  YG     ++CN+  I    +  Q+  
Sbjct: 41  GRYGSSMEVGTGGCTGGRYGSSMEVGIGGCTGGRYG---SSMECNDTWISAPPFEEQYTY 97

Query: 192 EVAMS 206
            V  S
Sbjct: 98  NVEPS 102


>SB_47535| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 298

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 168 KYPRQFLSEVAMSPDRFWVGRSSAH 242
           K  ++FL EVA +P + WV +S+ H
Sbjct: 157 KDKKKFLKEVAKNPQKIWVEKSNMH 181


>SB_44813| Best HMM Match : Crystallin (HMM E-Value=0.26)
          Length = 688

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +3

Query: 210 DRFWVGRSSAHDLRLRVKDCSFLPPKMEVKRC 305
           D  WV  S+A ++R +  +C+ + P+ +VK C
Sbjct: 531 DPLWVRPSTALEVRKKKPECNVIVPRRDVKDC 562


>SB_14306| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 963

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -3

Query: 428 VVNLNSRLKYDFRQKKKHIINLPTIIL 348
           V+ +  +  + FRQKK H++NL  +IL
Sbjct: 889 VLVVKLKTSHSFRQKKAHVVNLVLLIL 915


>SB_26155| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 815

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +3

Query: 81  RYGLEGFVGAIYGLERPKLDCNEAPICLYKYPRQFLSEVAMSPDRFWV 224
           RY  EG V +IYG  R  L C +   C++K     L  + +    F++
Sbjct: 734 RYSWEGTVLSIYGNNRGPLHCKQER-CIFKNSDDVLDAMDVEESAFYL 780


>SB_130| Best HMM Match : rve (HMM E-Value=0.0043)
          Length = 297

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 228 RSSAHDLRLRVKDCSFLPPKMEVKRCPIK 314
           R   H L L++  C F+  ++E KRC I+
Sbjct: 133 RLQVHSLCLQITKCEFVLREVEYKRCKIE 161


>SB_4357| Best HMM Match : Vicilin_N (HMM E-Value=0.11)
          Length = 406

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 10/43 (23%), Positives = 24/43 (55%)
 Frame = -3

Query: 398 DFRQKKKHIINLPTIILSIYKWLEQIRCLYRTAFNFHFRRKKA 270
           +F +  K +I+LP  +++++KW  +      + F+   +R K+
Sbjct: 24  EFAKLAKEVIHLPRHLITVHKWSREKALEALSVFDLRAKRTKS 66


>SB_36900| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 150

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
 Frame = -2

Query: 138 PVSVFPTRIWRPRILPIRTAKYETY----DPQYKYRREVA*SHSSCRIPA 1
           PV+    R W   + P RTAK +TY    + + K++R +     S R+ A
Sbjct: 84  PVARLTLRAWFSSVRPERTAKIQTYHFSLEAKAKFKRRIIDEPYSMRMRA 133


>SB_27599| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2937

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 141  CNEAPICLYKYPRQFLSEVAMSPD 212
            C   P CL  Y R  ++ V M PD
Sbjct: 979  CYNGPYCLRSYGRNLVNTVCMDPD 1002


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,568,776
Number of Sequences: 59808
Number of extensions: 272601
Number of successful extensions: 736
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1184975377
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)