Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0703
         (644 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   2.2  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   5.0  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   5.0  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   8.7  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -3

Query: 168 HTKLSNTKVKKCNLIFLSISSHWN 97
           H K+   K K+C+ + ++    WN
Sbjct: 196 HGKIKTFKCKQCDFVAITKLEQWN 219


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +2

Query: 113 MLKNIKLHFFTFVLLSFVWT 172
           +L+N+ + FF +V+L  + T
Sbjct: 131 LLRNVSVQFFVYVILYILAT 150


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +2

Query: 113 MLKNIKLHFFTFVLLSFVWT 172
           +L+N+ + FF +V+L  + T
Sbjct: 131 LLRNVSVQFFVYVILYILAT 150


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +2

Query: 209 CNSHPPP*NVSSKFQFYSTTAAPPTIMLH 295
           C+S P   +  S   F   T+ PPT   H
Sbjct: 105 CSSVPTTASYGSDLYFPGATSQPPTDNSH 133


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,380
Number of Sequences: 336
Number of extensions: 3502
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)