Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0702
(649 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0623 - 4580908-4582107 33 0.20
02_05_1253 + 35270040-35270044,35270213-35270297,35270809-352725... 32 0.34
09_04_0132 - 14921798-14922616,14922736-14922900 30 1.8
05_03_0424 - 13795721-13795900,13796134-13796202,13796260-137963... 30 1.8
04_04_1699 + 35462160-35462555,35463114-35463196,35463317-354633... 30 1.8
02_04_0179 + 20682852-20684510,20684593-20684661,20684741-206848... 29 2.4
01_06_0355 + 28657833-28660665,28660762-28661126 29 2.4
11_01_0710 - 5830475-5830595,5831498-5834124 29 3.2
01_06_1106 + 34563368-34563679 29 4.2
10_08_0731 + 20161962-20163628,20163721-20163862,20164181-201644... 28 5.6
08_02_1182 + 24992256-24992708,24992942-24993238 28 5.6
07_03_1147 + 24349811-24350161,24351031-24351366,24353260-243533... 28 5.6
07_01_0872 + 7246808-7246933,7246961-7247527 28 5.6
11_06_0025 - 19341127-19341339,19341426-19341620,19341912-193420... 28 7.4
09_04_0427 - 17458974-17459129,17459227-17459335,17459753-174598... 28 7.4
01_06_1466 + 37559600-37559795,37560597-37560730,37561252-375614... 28 7.4
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 27 9.7
06_03_0696 + 23617687-23617851,23618838-23619536 27 9.7
04_04_0449 - 25318322-25318618,25318839-25319234 27 9.7
02_05_0550 + 29904733-29905596 27 9.7
02_05_0003 - 24867053-24867145,24867264-24867437,24867673-248677... 27 9.7
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 27 9.7
01_01_0027 - 205450-206029,206706-207276,207408-207836,208438-20... 27 9.7
>03_01_0623 - 4580908-4582107
Length = 399
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = -3
Query: 395 LVLPTLRVAAYRSVAHGAQALLPPARCMARHYLCSSLMPLHCFVF 261
L+LP L V+ YR HG LL P R + + L + CFV+
Sbjct: 91 LLLPPLCVSLYRGRRHGIGNLLLPRRLVGAAAVLGGLYAVSCFVY 135
>02_05_1253 +
35270040-35270044,35270213-35270297,35270809-35272590,
35272710-35273237
Length = 799
Score = 32.3 bits (70), Expect = 0.34
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = -1
Query: 340 RPFSHPHAAWRDTTCVAA*CRCIVSCFGAALACVFSNPS*MVPEKRRL 197
RPF H HA RD CVA C C FG A+ + P +V ++RR+
Sbjct: 484 RPF-HLHAMIRDAACVAR-CLCDFRGFGFAVHVENALPDLVVGDERRI 529
>09_04_0132 - 14921798-14922616,14922736-14922900
Length = 327
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = -1
Query: 649 PPAP--PTNLRNRRTPSASSSNSCRLRAQRM*GGEAGDRAELPDDPSVCSR 503
PP P P + + R S ++NSC + R GG+A D C R
Sbjct: 96 PPRPVSPLSGKKRSRESMETANSCDANSNRHQGGDADHAESFAADDGTCRR 146
>05_03_0424 -
13795721-13795900,13796134-13796202,13796260-13796385,
13797224-13798166,13798263-13799248
Length = 767
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = -1
Query: 271 VSCFGAALACVFSNPS*MVPEKRRLTSSLTPEFRSIPRVRY 149
++ G ACV + +V + +R +SLTPEF+ IP++ +
Sbjct: 458 ITFIGVLSACVHAG---LVKDGKRWFNSLTPEFQIIPKIEH 495
>04_04_1699 +
35462160-35462555,35463114-35463196,35463317-35463378,
35463745-35463806,35463932-35463991,35464079-35464111,
35464196-35464261,35464349-35464393
Length = 268
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2
Query: 648 PPRPPRTCGTGAPPPRPQATRAD 580
PP PPR T PP RPQ + D
Sbjct: 60 PPPPPRRTRTRGPPARPQQSYTD 82
>02_04_0179 +
20682852-20684510,20684593-20684661,20684741-20684809,
20686779-20688206
Length = 1074
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -2
Query: 648 PPRPPRTCGTGAPPPRPQATR 586
PP PP GT PPP P A +
Sbjct: 23 PPPPPLLTGTAVPPPPPAAAQ 43
>01_06_0355 + 28657833-28660665,28660762-28661126
Length = 1065
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -1
Query: 445 LLFSSPEACGNDDLSASLCSQPCGWPPTGVWLMAHRPFSHPHAAWRDTTC 296
LL S+P DDLSA L + P+GV + + P+ W TC
Sbjct: 21 LLASAPAFATADDLSALLAFRARVSDPSGVLRRGNWTAAAPYCGWLGVTC 70
>11_01_0710 - 5830475-5830595,5831498-5834124
Length = 915
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -3
Query: 326 PARCMARHYLCSSLMPLHCFVFWSCSCLRFL 234
PA+ A H+L + LH F S SCLR L
Sbjct: 50 PAKIRALHFLGCGKIELHGVAFSSASCLRVL 80
>01_06_1106 + 34563368-34563679
Length = 103
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2
Query: 242 ASKSSSKTRNNAAALSC--YTGSVSPCSVRVGEGPVRHEPHSCRRPPAR 382
A+ +S+ R AA+ G V P + +RH P+ CRRPP R
Sbjct: 15 ATPTSTADRLGAASSQAPPRPGRVPPSASAPPPAELRHGPNRCRRPPWR 63
>10_08_0731 +
20161962-20163628,20163721-20163862,20164181-20164490,
20164566-20166466,20166557-20166650,20166953-20167440,
20167919-20168599,20168870-20168944,20170148-20170210,
20170588-20170633,20171373-20171420,20171484-20171557
Length = 1862
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = -1
Query: 544 DRAELPDDPSVCSRHAMLTLEKCGCANTCLD*DLLFSSPEACGNDDLSASLCSQPCGWPP 365
D D +C R T+E+ T LD SS A ++SA L +QPC P
Sbjct: 252 DEKPKASDDVLCHRSLGETIEQDAETRTVLDDGSRNSSDGASHRIEVSACLSNQPCLKPC 311
Query: 364 TG 359
+G
Sbjct: 312 SG 313
>08_02_1182 + 24992256-24992708,24992942-24993238
Length = 249
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 275 AAALSCYTGSVSPCSVRVGEGPVRHEPHSCRRPPARL 385
A A SC T ++ + P RH P CR P RL
Sbjct: 7 AVAFSCATVALPRALALLLAPPARHRPQHCRCPAHRL 43
>07_03_1147 +
24349811-24350161,24351031-24351366,24353260-24353376,
24353585-24353647,24354066-24354139,24354216-24354306,
24354791-24354850,24355270-24355462,24356242-24356522,
24357435-24357536,24357664-24357774,24358410-24358475,
24358562-24358660,24358757-24358788,24359171-24359274,
24359380-24359507,24359625-24359756,24360051-24360359,
24360887-24361071,24361161-24361263,24361407-24361552,
24361748-24361827,24361901-24362103
Length = 1121
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 648 PPRPPRTCGTGAPPPRPQ 595
PP PPRT PPP PQ
Sbjct: 55 PPPPPRTLPPPPPPPPPQ 72
>07_01_0872 + 7246808-7246933,7246961-7247527
Length = 230
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -3
Query: 374 VAAYRSVAHGAQAL-LPPARCMARHYLCSSLM 282
VAA + HGAQ + +P CM ++C SLM
Sbjct: 119 VAALKLRIHGAQKVDMPLPECMWNDFVCGSLM 150
>11_06_0025 -
19341127-19341339,19341426-19341620,19341912-19342088,
19342505-19342672,19343533-19343574,19344129-19344214,
19345218-19345545
Length = 402
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -1
Query: 649 PPAPPTNLRNRRTPSASSSNSCR 581
PP+PP RTPSA+S++SCR
Sbjct: 70 PPSPPPP----RTPSAASTSSCR 88
>09_04_0427 -
17458974-17459129,17459227-17459335,17459753-17459862,
17459981-17460226,17460591-17460680,17461325-17461602,
17461814-17461942,17462007-17462418
Length = 509
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1
Query: 436 SSPEACGNDDLSASLCSQPCG 374
SSPE+ DD A+L QPCG
Sbjct: 75 SSPESTKEDDRIAALPGQPCG 95
>01_06_1466 +
37559600-37559795,37560597-37560730,37561252-37561437,
37562538-37562753,37563008-37563119,37563493-37563663,
37564621-37564684,37565555-37565685,37566263-37566393,
37566843-37566945,37567322-37567398,37567813-37567860,
37568162-37568311,37568810-37569010
Length = 639
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/66 (22%), Positives = 29/66 (43%)
Frame = -3
Query: 434 LTRSLR*RRPVSKLVLPTLRVAAYRSVAHGAQALLPPARCMARHYLCSSLMPLHCFVFWS 255
L+R + P +P L++ Q+++ + HY SL+ + C ++
Sbjct: 149 LSRDIVEAAPGLSKSVPKLKIVILVVSPFSCQSIMDDELILTPHYSNKSLITIRCRSRFT 208
Query: 254 CSCLRF 237
CSC +F
Sbjct: 209 CSCNQF 214
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 648 PPRPPRTCGTGAPPPRPQA 592
PP PP++ G G P P P A
Sbjct: 600 PPPPPKSTGPGPPRPPPPA 618
>06_03_0696 + 23617687-23617851,23618838-23619536
Length = 287
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 648 PPRPPRTCGTGAPPPRP 598
PP PP T G PPP P
Sbjct: 86 PPSPPATHDVGQPPPPP 102
>04_04_0449 - 25318322-25318618,25318839-25319234
Length = 230
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +2
Query: 275 AAALSCYTGSVSPCSVRVGEGPVRHEPHSCRRPPARL 385
A A SC ++ + P RH P CR P RL
Sbjct: 7 AVAFSCAAAALPRALALLLAPPARHRPQRCRCPAHRL 43
>02_05_0550 + 29904733-29905596
Length = 287
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 297 QVVSRHAACGWEKGLCAMSHTPVGGHPQGWEHKLADRSSLPQASG 431
+VV R A G++ G+C S G P G H+ D ++ A+G
Sbjct: 117 RVVERLRARGFDAGVCRSSWERTGSVPAG-SHEYVDVTAAASATG 160
>02_05_0003 -
24867053-24867145,24867264-24867437,24867673-24867735,
24868108-24868198,24869579-24869673,24870471-24870668,
24871475-24871648,24872335-24872439,24872645-24872737,
24873688-24873690,24874776-24874844,24875208-24875265,
24875810-24875918,24876603-24876714,24877992-24878204,
24878214-24878546
Length = 660
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = -1
Query: 649 PPAPPTNLRNRRTPSASSSNSCR--LRAQRM 563
PP PP + R R S+SSS S R +RA R+
Sbjct: 49 PPPPPQDRRRRSASSSSSSTSDRESIRAIRL 79
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = -2
Query: 648 PPRPPRTCGTGAPPPR-PQATRA 583
PP PP GAPPP P+AT A
Sbjct: 373 PPPPPPPIKKGAPPPAPPKATMA 395
>01_01_0027 -
205450-206029,206706-207276,207408-207836,208438-208525
Length = 555
Score = 27.5 bits (58), Expect = 9.7
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 9/60 (15%)
Frame = -1
Query: 397 SLCSQPCGWPPTGVWLMAHR---------PFSHPHAAWRDTTCVAA*CRCIVSCFGAALA 245
+L CG P+G W+ HR +S ++W DT A R S G ALA
Sbjct: 80 NLAKSLCGPSPSGCWVGGHRNNTASAFAWKWSDDSSSWNDTAFPADPLRANCSTTGCALA 139
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,327,667
Number of Sequences: 37544
Number of extensions: 416650
Number of successful extensions: 1943
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1922
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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