Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0701
         (594 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U51999-2|AAA96083.2|  327|Caenorhabditis elegans Hypothetical pr...    28   4.4  
U46668-1|AAA93344.1|  181|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z83118-1|CAB05575.1|  975|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z81552-6|CAB04489.1|  975|Caenorhabditis elegans Hypothetical pr...    28   5.8  
AF000261-10|AAB52930.1|  639|Caenorhabditis elegans Hypothetical...    28   5.8  

>U51999-2|AAA96083.2|  327|Caenorhabditis elegans Hypothetical
           protein C43H6.5 protein.
          Length = 327

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -1

Query: 249 LMILLFDVIILIFTTILEHSCFFCEKHTDLKL 154
           L +LLF +I L+F TI+   CF C K  D ++
Sbjct: 127 LWLLLF-LIGLLFLTIMAFLCFMCWKQKDARV 157


>U46668-1|AAA93344.1|  181|Caenorhabditis elegans Hypothetical
           protein F38E9.6 protein.
          Length = 181

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -1

Query: 249 LMILLFDVIILIFTTILEHSCFFCEKHTDLKLRYL 145
           ++ +  D   + F+ + E SC F +K+ D  LRYL
Sbjct: 14  ILAISMDHTNIFFSKLFEKSCEFQQKNQDFLLRYL 48


>Z83118-1|CAB05575.1|  975|Caenorhabditis elegans Hypothetical protein
            F56G4.1 protein.
          Length = 975

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 12/38 (31%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = -1

Query: 285  THMYL*K-FICALLMILLFDVIILIFTTILEHSCFFCE 175
            T ++L K F C+LL+I L   ++++ + ++E   F C+
Sbjct: 894  TRVFLKKWFECSLLIICLIWTLVILASQMMEEDTFLCQ 931


>Z81552-6|CAB04489.1|  975|Caenorhabditis elegans Hypothetical protein
            F56G4.1 protein.
          Length = 975

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 12/38 (31%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = -1

Query: 285  THMYL*K-FICALLMILLFDVIILIFTTILEHSCFFCE 175
            T ++L K F C+LL+I L   ++++ + ++E   F C+
Sbjct: 894  TRVFLKKWFECSLLIICLIWTLVILASQMMEEDTFLCQ 931


>AF000261-10|AAB52930.1|  639|Caenorhabditis elegans Hypothetical
           protein F19B10.10 protein.
          Length = 639

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -1

Query: 558 MNIMSASYFQLSPELKTKASITDSKKYLNLNPCLTHSH 445
           +N M  S  +L   LKT      + +Y  +NPC++++H
Sbjct: 65  INKMYGSAEELWENLKTFIDFQGNLQYFEVNPCVSYNH 102


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,288,113
Number of Sequences: 27780
Number of extensions: 240309
Number of successful extensions: 487
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 487
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)