BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= P5PG0701 (594 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 22 3.9 AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 22 3.9 AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 3.9 AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 3.9 AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 3.9 AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 3.9 AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 3.9 AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 3.9 AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 3.9 AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 3.9 AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 3.9 AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 3.9 AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 3.9 AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 3.9 AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 3.9 AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 3.9 AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 3.9 AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 5.2 AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 5.2 AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 5.2 AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 5.2 AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 5.2 AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 22 5.2 AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 5.2 AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 5.2 AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 5.2 AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 5.2 AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 21 6.9 AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 9.1 >DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related protein STG-1 protein. Length = 397 Score = 22.2 bits (45), Expect = 3.9 Identities = 8/12 (66%), Positives = 9/12 (75%) Frame = -1 Query: 204 ILEHSCFFCEKH 169 IL HS F CE+H Sbjct: 289 ILGHSGFLCERH 300 >AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex determiner protein. Length = 400 Score = 22.2 bits (45), Expect = 3.9 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = -3 Query: 100 KKHTTISHSLQLTSHVFQY 44 KK+ T S+SL+ +H FQ+ Sbjct: 197 KKYATSSNSLRSRTHGFQH 215 Score = 22.2 bits (45), Expect = 3.9 Identities = 9/25 (36%), Positives = 16/25 (64%) Frame = +2 Query: 332 CPYGSMTYHNIGNYEFIGFILNYLK 406 C Y S Y+N NY+ + + +NY++ Sbjct: 311 CNY-SNNYYNNNNYKKLYYNINYIE 334 >AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex determiner protein. Length = 397 Score = 22.2 bits (45), Expect = 3.9 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = -3 Query: 100 KKHTTISHSLQLTSHVFQY 44 KK+ T S+SL+ +H FQ+ Sbjct: 197 KKYATSSNSLRSRTHGFQH 215 >AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex determiner protein. Length = 406 Score = 22.2 bits (45), Expect = 3.9 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = -3 Query: 100 KKHTTISHSLQLTSHVFQY 44 KK+ T S+SL+ +H FQ+ Sbjct: 208 KKYATSSNSLRSRTHGFQH 226 >AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 22.2 bits (45), Expect = 3.9 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = -3 Query: 100 KKHTTISHSLQLTSHVFQY 44 KK+ T S+SL+ +H FQ+ Sbjct: 208 KKYATSSNSLRSRTHGFQH 226 >AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 22.2 bits (45), Expect = 3.9 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = -3 Query: 100 KKHTTISHSLQLTSHVFQY 44 KK+ T S+SL+ +H FQ+ Sbjct: 208 KKYATSSNSLRSRTHGFQH 226 >AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 22.2 bits (45), Expect = 3.9 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = -3 Query: 100 KKHTTISHSLQLTSHVFQY 44 KK+ T S+SL+ +H FQ+ Sbjct: 208 KKYATSSNSLRSRTHGFQH 226 >AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 22.2 bits (45), Expect = 3.9 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = -3 Query: 100 KKHTTISHSLQLTSHVFQY 44 KK+ T S+SL+ +H FQ+ Sbjct: 208 KKYATSSNSLRSRTHGFQH 226 >AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 22.2 bits (45), Expect = 3.9 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = -3 Query: 100 KKHTTISHSLQLTSHVFQY 44 KK+ T S+SL+ +H FQ+ Sbjct: 208 KKYATSSNSLRSRTHGFQH 226 >AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex determiner protein. Length = 397 Score = 22.2 bits (45), Expect = 3.9 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = -3 Query: 100 KKHTTISHSLQLTSHVFQY 44 KK+ T S+SL+ +H FQ+ Sbjct: 197 KKYATSSNSLRSRTHGFQH 215 >AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex determiner protein. Length = 419 Score = 22.2 bits (45), Expect = 3.9 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = -3 Query: 100 KKHTTISHSLQLTSHVFQY 44 KK+ T S+SL+ +H FQ+ Sbjct: 208 KKYATSSNSLRSRTHGFQH 226 >AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex determiner protein. Length = 426 Score = 22.2 bits (45), Expect = 3.9 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = -3 Query: 100 KKHTTISHSLQLTSHVFQY 44 KK+ T S+SL+ +H FQ+ Sbjct: 208 KKYATSSNSLRSRTHGFQH 226 >AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex determiner protein. Length = 407 Score = 22.2 bits (45), Expect = 3.9 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = -3 Query: 100 KKHTTISHSLQLTSHVFQY 44 KK+ T S+SL+ +H FQ+ Sbjct: 208 KKYATSSNSLRSRTHGFQH 226 >AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex determiner protein. Length = 414 Score = 22.2 bits (45), Expect = 3.9 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = -3 Query: 100 KKHTTISHSLQLTSHVFQY 44 KK+ T S+SL+ +H FQ+ Sbjct: 208 KKYATSSNSLRSRTHGFQH 226 >AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex determiner protein. Length = 414 Score = 22.2 bits (45), Expect = 3.9 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = -3 Query: 100 KKHTTISHSLQLTSHVFQY 44 KK+ T S+SL+ +H FQ+ Sbjct: 208 KKYATSSNSLRSRTHGFQH 226 >AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex determiner protein. Length = 425 Score = 22.2 bits (45), Expect = 3.9 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = -3 Query: 100 KKHTTISHSLQLTSHVFQY 44 KK+ T S+SL+ +H FQ+ Sbjct: 208 KKYATSSNSLRSRTHGFQH 226 >AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex determiner protein. Length = 428 Score = 22.2 bits (45), Expect = 3.9 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = -3 Query: 100 KKHTTISHSLQLTSHVFQY 44 KK+ T S+SL+ +H FQ+ Sbjct: 208 KKYATSSNSLRSRTHDFQH 226 >AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex determiner protein. Length = 406 Score = 21.8 bits (44), Expect = 5.2 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = -3 Query: 100 KKHTTISHSLQLTSHVFQY 44 KK+ T S+SL+ +H FQ+ Sbjct: 208 KKYATSSNSLRNRTHDFQH 226 >AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex determiner protein. Length = 396 Score = 21.8 bits (44), Expect = 5.2 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = -3 Query: 100 KKHTTISHSLQLTSHVFQY 44 KK+ T S+SL+ +H FQ+ Sbjct: 197 KKYATSSNSLRNRTHGFQH 215 >AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex determiner protein. Length = 407 Score = 21.8 bits (44), Expect = 5.2 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = -3 Query: 100 KKHTTISHSLQLTSHVFQY 44 KK+ T S+SL+ +H FQ+ Sbjct: 208 KKYATSSNSLRNRTHGFQH 226 >AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex determiner protein. Length = 407 Score = 21.8 bits (44), Expect = 5.2 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = -3 Query: 100 KKHTTISHSLQLTSHVFQY 44 KK+ T S+SL+ +H FQ+ Sbjct: 208 KKYATSSNSLRNRTHGFQH 226 >AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex determiner protein. Length = 396 Score = 21.8 bits (44), Expect = 5.2 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = -3 Query: 100 KKHTTISHSLQLTSHVFQY 44 KK+ T S+SL+ +H FQ+ Sbjct: 197 KKYATSSNSLRNRTHGFQH 215 >AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex determiner protein. Length = 413 Score = 21.8 bits (44), Expect = 5.2 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = -3 Query: 100 KKHTTISHSLQLTSHVFQY 44 KK+ T S+SL+ +H FQ+ Sbjct: 208 KKYATSSNSLRNRTHGFQH 226 >AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex determiner protein. Length = 400 Score = 21.8 bits (44), Expect = 5.2 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = -3 Query: 100 KKHTTISHSLQLTSHVFQY 44 KK+ T S+SL+ +H FQ+ Sbjct: 197 KKYATSSNSLRNRTHGFQH 215 >AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex determiner protein. Length = 418 Score = 21.8 bits (44), Expect = 5.2 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = -3 Query: 100 KKHTTISHSLQLTSHVFQY 44 KK+ T S+SL+ +H FQ+ Sbjct: 213 KKYATSSNSLRNRTHGFQH 231 >AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex determiner protein. Length = 385 Score = 21.8 bits (44), Expect = 5.2 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = -3 Query: 100 KKHTTISHSLQLTSHVFQY 44 KK+ T S+SL+ +H FQ+ Sbjct: 208 KKYATSSNSLRNRTHGFQH 226 >AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex determiner protein. Length = 410 Score = 21.8 bits (44), Expect = 5.2 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = -3 Query: 100 KKHTTISHSLQLTSHVFQY 44 KK+ T S+SL+ +H FQ+ Sbjct: 208 KKYATSSNSLRNRTHGFQH 226 >AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter transporter-1A protein. Length = 203 Score = 21.4 bits (43), Expect = 6.9 Identities = 7/14 (50%), Positives = 8/14 (57%) Frame = +3 Query: 15 SNLSWDMRTSYWNT 56 S L W +YWNT Sbjct: 94 SELPWGSCNNYWNT 107 >AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera ORF for hypotheticalprotein. ). Length = 998 Score = 21.0 bits (42), Expect = 9.1 Identities = 6/9 (66%), Positives = 7/9 (77%) Frame = -3 Query: 361 VMVCHGPIW 335 VMVC P+W Sbjct: 545 VMVCSAPVW 553 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 154,175 Number of Sequences: 438 Number of extensions: 3366 Number of successful extensions: 32 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 31 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 32 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 17359926 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -