Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0700
         (529 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   5.1  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   5.1  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   6.7  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   6.7  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   6.7  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   8.9  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   8.9  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   8.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.9  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
          transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +1

Query: 7  LQEFGTRNDSTG 42
          LQEFG R  STG
Sbjct: 5  LQEFGKRGRSTG 16


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 392 FIIVNVLRIPVCHSMICTYIVSFLYFI 472
           FII+ V+   VC+ MI      F ++I
Sbjct: 502 FIIIPVILTSVCYFMIGLNSQGFRFYI 528


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 193 TCPSCHASVMTKITTKASTK 252
           T  +   ++ TK TTK STK
Sbjct: 165 TSTTTRTTLTTKFTTKPSTK 184


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 6/18 (33%), Positives = 8/18 (44%)
 Frame = +3

Query: 213 VGHDQNHDQSQHEDSHHR 266
           +GH       QH   HH+
Sbjct: 167 MGHHMQEQHPQHHQPHHQ 184


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 6/18 (33%), Positives = 8/18 (44%)
 Frame = +3

Query: 213 VGHDQNHDQSQHEDSHHR 266
           +GH       QH   HH+
Sbjct: 169 MGHHMQEQHPQHHQPHHQ 186


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 385 LYRFQCRRCS 356
           +YR+ CR CS
Sbjct: 284 VYRYSCRDCS 293


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 385 LYRFQCRRCS 356
           +YR+ CR CS
Sbjct: 42  VYRYSCRDCS 51


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 430 FDDLHLYSFVFIFHIH 477
           + DLH    VFI +IH
Sbjct: 359 YGDLHNMGHVFISYIH 374


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 107 YFFYLFFQITLLRMRVVC 54
           YF+Y F   T+  + +VC
Sbjct: 240 YFYYAFILFTVHLLLLVC 257


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,029
Number of Sequences: 336
Number of extensions: 2940
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12782794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)