Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0699
         (611 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   7.2  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   9.5  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   9.5  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   9.5  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   9.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   9.5  

>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 96  ESASSLTSVPVCKDS*SSTPSVEVPALGSLPY*WS 200
           +S SS   V   ++S SS+PS+++   G L   WS
Sbjct: 357 QSQSSPKFVARREESNSSSPSLDLGKEGGLEAQWS 391


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 595 GKLFMVALLGRDDWRVRDQ 539
           G LF++ L     W++RD+
Sbjct: 1   GSLFLLLLSTSHGWQIRDR 19


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 595 GKLFMVALLGRDDWRVRDQ 539
           G LF++ L     W++RD+
Sbjct: 6   GSLFLLLLSTSHGWQIRDR 24


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 595 GKLFMVALLGRDDWRVRDQ 539
           G LF++ L     W++RD+
Sbjct: 6   GSLFLLLLSTSHGWQIRDR 24


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +3

Query: 486 TSPSSRLTWCLTPVSTS 536
           TSP+S +  C++P++ S
Sbjct: 582 TSPNSAVRKCMSPINGS 598


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 10/35 (28%), Positives = 13/35 (37%)
 Frame = -2

Query: 130 QTGTLVSELADSVQNQIYDFLLQWCSDHGHSCWPH 26
           Q G     + D  +   Y +    C D G   WPH
Sbjct: 551 QQGDTCCWVCDQCEEYEYVYDEYTCMDCGPGKWPH 585


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,416
Number of Sequences: 438
Number of extensions: 3348
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)